RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 CCDC141Q6ZP82 1450 aa16.86■□□□□ 0.29
SPIN3-236ENST00000640131 PREX2Q70Z35 1606 aa16.85■□□□□ 0.29
SPIN3-236ENST00000640131 SHROOM2Q13796 1616 aa16.84■□□□□ 0.29
SPIN3-236ENST00000640131 ABCC2Q92887 1545 aa16.83■□□□□ 0.29
SPIN3-236ENST00000640131 CNTLNQ9NXG0 1405 aa16.83■□□□□ 0.29
SPIN3-236ENST00000640131 USP47Q96K76 1375 aa16.83■□□□□ 0.28
SPIN3-236ENST00000640131 IRX6P78412 446 aaPredicted RBP16.82■□□□□ 0.28
SPIN3-236ENST00000640131 CARD11Q9BXL7 1154 aa16.82■□□□□ 0.28
SPIN3-236ENST00000640131 SHANK2Q9UPX8 1470 aa16.82■□□□□ 0.28
SPIN3-236ENST00000640131 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
SPIN3-236ENST00000640131 AFAP1Q8N556 730 aa16.8■□□□□ 0.28
SPIN3-236ENST00000640131 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
SPIN3-236ENST00000640131 PLEKHH2Q8IVE3 1493 aa16.79■□□□□ 0.28
SPIN3-236ENST00000640131 ARHGEF12Q9NZN5 1544 aa16.79■□□□□ 0.28
SPIN3-236ENST00000640131 ZCCHC11Q5TAX3 1644 aaKnown RBP16.79■□□□□ 0.28
SPIN3-236ENST00000640131 MYO5CQ9NQX4 1742 aa16.78■□□□□ 0.28
SPIN3-236ENST00000640131 ARHGEF5Q12774 1597 aa16.78■□□□□ 0.28
SPIN3-236ENST00000640131 SPATA31E1Q6ZUB1 1445 aa16.78■□□□□ 0.28
SPIN3-236ENST00000640131 FAM135AQ9P2D6 1515 aa16.77■□□□□ 0.28
SPIN3-236ENST00000640131 BCORL1Q5H9F3 1711 aa16.77■□□□□ 0.28
SPIN3-236ENST00000640131 RTL5Q5HYW3 569 aaPredicted RBP16.77■□□□□ 0.27
SPIN3-236ENST00000640131 ST20-MTHFSA0A0A6YYL1 179 aa16.76■□□□□ 0.27
SPIN3-236ENST00000640131 ZMYND15Q9H091 742 aa16.75■□□□□ 0.27
SPIN3-236ENST00000640131 GLIPR1L2Q4G1C9 344 aa16.75■□□□□ 0.27
SPIN3-236ENST00000640131 TRAPPC8Q9Y2L5 1435 aa16.74■□□□□ 0.27
SPIN3-236ENST00000640131 EFCAB2Q5VUJ9 269 aa16.74■□□□□ 0.27
SPIN3-236ENST00000640131 NOP58Q9Y2X3 529 aaKnown RBP16.74■□□□□ 0.27
SPIN3-236ENST00000640131 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
SPIN3-236ENST00000640131 NBPF1Q3BBV0 1214 aa16.74■□□□□ 0.27
SPIN3-236ENST00000640131 CCDC144AA2RUR9 1427 aa16.72■□□□□ 0.27
SPIN3-236ENST00000640131 RSPH4AQ5TD94 716 aa16.71■□□□□ 0.27
SPIN3-236ENST00000640131 ROCK2O75116 1388 aaKnown RBP16.71■□□□□ 0.27
SPIN3-236ENST00000640131 PLCH2O75038 1416 aa16.69■□□□□ 0.26
SPIN3-236ENST00000640131 VSIG10Q8N0Z9 540 aa16.69■□□□□ 0.26
SPIN3-236ENST00000640131 KDM5CP41229 1560 aa16.68■□□□□ 0.26
SPIN3-236ENST00000640131 SPAG9O60271 1321 aaKnown RBP16.68■□□□□ 0.26
SPIN3-236ENST00000640131 KDM5DQ9BY66 1539 aa16.67■□□□□ 0.26
SPIN3-236ENST00000640131 PLA2R1Q13018 1463 aa16.67■□□□□ 0.26
SPIN3-236ENST00000640131 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
SPIN3-236ENST00000640131 RALGAPBQ86X10 1494 aa16.65■□□□□ 0.26
SPIN3-236ENST00000640131 POLR1AO95602 1720 aaPredicted RBP16.64■□□□□ 0.25
SPIN3-236ENST00000640131 DHX29Q7Z478 1369 aaKnown RBP16.63■□□□□ 0.25
SPIN3-236ENST00000640131 ABCC1P33527 1531 aa16.62■□□□□ 0.25
SPIN3-236ENST00000640131 UHRF1BP1Q6BDS2 1440 aa16.61■□□□□ 0.25
SPIN3-236ENST00000640131 KIF3BO15066 747 aa16.61■□□□□ 0.25
SPIN3-236ENST00000640131 A2MP01023 1474 aa16.61■□□□□ 0.25
SPIN3-236ENST00000640131 DUOX2Q9NRD8 1548 aa16.6■□□□□ 0.25
SPIN3-236ENST00000640131 UNC13BO14795 1591 aa16.6■□□□□ 0.25
SPIN3-236ENST00000640131 MAST1Q9Y2H9 1570 aa16.6■□□□□ 0.25
SPIN3-236ENST00000640131 SCAPERQ9BY12 1400 aa16.6■□□□□ 0.25
SPIN3-236ENST00000640131 PRAG1Q86YV5 1406 aa16.59■□□□□ 0.25
SPIN3-236ENST00000640131 RSPH6AQ9H0K4 717 aa16.59■□□□□ 0.25
SPIN3-236ENST00000640131 PLXNC1O60486 1568 aa16.58■□□□□ 0.25
SPIN3-236ENST00000640131 UHRF1BP1LA0JNW5 1464 aa16.58■□□□□ 0.25
SPIN3-236ENST00000640131 FANCAO15360 1455 aa16.58■□□□□ 0.25
SPIN3-236ENST00000640131 WDR7Q9Y4E6 1490 aa16.58■□□□□ 0.25
SPIN3-236ENST00000640131 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
SPIN3-236ENST00000640131 A0A0U1RQG5 324 aaPredicted RBP16.58■□□□□ 0.24
SPIN3-236ENST00000640131 TMC1Q8TDI8 760 aa16.56■□□□□ 0.24
SPIN3-236ENST00000640131 IQGAP3Q86VI3 1631 aa16.56■□□□□ 0.24
SPIN3-236ENST00000640131 ASXL2Q76L83 1435 aa16.56■□□□□ 0.24
SPIN3-236ENST00000640131 CC2D1BQ5T0F9 858 aaKnown RBP16.55■□□□□ 0.24
SPIN3-236ENST00000640131 CFAP65Q6ZU64 1925 aaKnown RBP16.55■□□□□ 0.24
SPIN3-236ENST00000640131 ERBINQ96RT1 1412 aa16.54■□□□□ 0.24
SPIN3-236ENST00000640131 NPM1P06748 294 aaKnown RBP eCLIP16.54■□□□□ 0.24
SPIN3-236ENST00000640131 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
SPIN3-236ENST00000640131 ADGRL1O94910 1474 aa16.54■□□□□ 0.24
SPIN3-236ENST00000640131 TRPM1Q7Z4N2 1603 aa16.54■□□□□ 0.24
SPIN3-236ENST00000640131 PDE4CQ08493 712 aa16.53■□□□□ 0.24
SPIN3-236ENST00000640131 DISP3Q9P2K9 1392 aa16.53■□□□□ 0.24
SPIN3-236ENST00000640131 ZFYVE16Q7Z3T8 1539 aa16.52■□□□□ 0.24
SPIN3-236ENST00000640131 CHGAP10645 457 aaKnown RBP16.52■□□□□ 0.24
SPIN3-236ENST00000640131 BRPF3Q9ULD4 1205 aa16.51■□□□□ 0.23
SPIN3-236ENST00000640131 E9PCH4 1651 aa16.51■□□□□ 0.23
SPIN3-236ENST00000640131 GGT6Q6P531 493 aa16.49■□□□□ 0.23
SPIN3-236ENST00000640131 UGGT1Q9NYU2 1555 aa16.49■□□□□ 0.23
SPIN3-236ENST00000640131 ATP7AQ04656 1500 aa16.49■□□□□ 0.23
SPIN3-236ENST00000640131 ZBED9Q6R2W3 1325 aa16.48■□□□□ 0.23
SPIN3-236ENST00000640131 FGD1P98174 961 aa16.48■□□□□ 0.23
SPIN3-236ENST00000640131 TESK2Q96S53 571 aa16.47■□□□□ 0.23
SPIN3-236ENST00000640131 PANK3Q9H999 370 aa16.47■□□□□ 0.23
SPIN3-236ENST00000640131 ATP10AO60312 1499 aa16.46■□□□□ 0.23
SPIN3-236ENST00000640131 MAGI2Q86UL8 1455 aa16.46■□□□□ 0.23
SPIN3-236ENST00000640131 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.22
SPIN3-236ENST00000640131 RBM10P98175 930 aaKnown RBP16.45■□□□□ 0.22
SPIN3-236ENST00000640131 WASHC2CQ9Y4E1 1318 aa16.45■□□□□ 0.22
SPIN3-236ENST00000640131 ARID4BQ4LE39 1312 aaPredicted RBP16.45■□□□□ 0.22
SPIN3-236ENST00000640131 RAPGEF3O95398 923 aa16.45■□□□□ 0.22
SPIN3-236ENST00000640131 B4GALNT3Q6L9W6 998 aa16.44■□□□□ 0.22
SPIN3-236ENST00000640131 ABCA9Q8IUA7 1624 aa16.44■□□□□ 0.22
SPIN3-236ENST00000640131 NUTM2DQ5VT03 806 aaPredicted RBP16.44■□□□□ 0.22
SPIN3-236ENST00000640131 KANK1Q14678 1352 aa16.43■□□□□ 0.22
SPIN3-236ENST00000640131 CLTCL1P53675 1640 aa16.43■□□□□ 0.22
SPIN3-236ENST00000640131 AAMPQ13685 434 aa16.43■□□□□ 0.22
SPIN3-236ENST00000640131 MYBBP1AQ9BQG0 1328 aaKnown RBP16.42■□□□□ 0.22
SPIN3-236ENST00000640131 TMF1P82094 1093 aa16.42■□□□□ 0.22
SPIN3-236ENST00000640131 CFAP70Q5T0N1 1121 aa16.42■□□□□ 0.22
SPIN3-236ENST00000640131 SPHKAPQ2M3C7 1700 aa16.41■□□□□ 0.22
SPIN3-236ENST00000640131 RTEL1-TNFRSF6BF6WH68 1400 aa16.41■□□□□ 0.22
SPIN3-236ENST00000640131 PDIA4P13667 645 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms