RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 FGD1P98174 961 aa13.93□□□□□ -0.18
SPIN3-230ENST00000639888 PHLDB1Q86UU1 1377 aa13.93□□□□□ -0.18
SPIN3-230ENST00000639888 MAPK8IP3Q9UPT6 1336 aa13.92□□□□□ -0.18
SPIN3-230ENST00000639888 FANCD2Q9BXW9 1451 aa13.92□□□□□ -0.18
SPIN3-230ENST00000639888 AAMPQ13685 434 aa13.92□□□□□ -0.18
SPIN3-230ENST00000639888 ZSCAN30Q86W11 494 aa13.92□□□□□ -0.18
SPIN3-230ENST00000639888 PLCD3Q8N3E9 789 aa13.92□□□□□ -0.18
SPIN3-230ENST00000639888 CBX1P83916 185 aa13.92□□□□□ -0.18
SPIN3-230ENST00000639888 GOLGA2Q08379 1002 aa13.92□□□□□ -0.18
SPIN3-230ENST00000639888 CLUAP1Q96AJ1 413 aa13.92□□□□□ -0.18
SPIN3-230ENST00000639888 KNSTRNQ9Y448 316 aa13.91□□□□□ -0.18
SPIN3-230ENST00000639888 FMN1Q68DA7 1419 aa13.91□□□□□ -0.18
SPIN3-230ENST00000639888 CCDC173Q0VFZ6 552 aa13.9□□□□□ -0.18
SPIN3-230ENST00000639888 RGL3Q3MIN7 710 aa13.9□□□□□ -0.18
SPIN3-230ENST00000639888 MPHOSPH9Q99550 1183 aa13.9□□□□□ -0.18
SPIN3-230ENST00000639888 COG6Q9Y2V7 657 aa13.9□□□□□ -0.19
SPIN3-230ENST00000639888 MYBBP1AQ9BQG0 1328 aaKnown RBP13.89□□□□□ -0.19
SPIN3-230ENST00000639888 PNISRQ8TF01 805 aaKnown RBP13.89□□□□□ -0.19
SPIN3-230ENST00000639888 RWDD1Q9H446 243 aaPredicted RBP13.89□□□□□ -0.19
SPIN3-230ENST00000639888 LRRC9Q6ZRR7 1453 aa13.89□□□□□ -0.19
SPIN3-230ENST00000639888 RAD54L2Q9Y4B4 1467 aa13.89□□□□□ -0.19
SPIN3-230ENST00000639888 CHMP4BQ9H444 224 aaKnown RBP13.89□□□□□ -0.19
SPIN3-230ENST00000639888 XPCQ01831 940 aaPredicted RBP13.88□□□□□ -0.19
SPIN3-230ENST00000639888 FOXD4L5Q5VV16 416 aaPredicted RBP13.87□□□□□ -0.19
SPIN3-230ENST00000639888 FOXD4L4Q8WXT5 416 aaPredicted RBP13.87□□□□□ -0.19
SPIN3-230ENST00000639888 CGNQ9P2M7 1197 aaKnown RBP13.87□□□□□ -0.19
SPIN3-230ENST00000639888 MPNDQ8N594 471 aa13.87□□□□□ -0.19
SPIN3-230ENST00000639888 PMFBP1Q8TBY8 1022 aa13.87□□□□□ -0.19
SPIN3-230ENST00000639888 NAP1L2Q9ULW6 460 aaPredicted RBP13.86□□□□□ -0.19
SPIN3-230ENST00000639888 RNF214Q8ND24 703 aa13.86□□□□□ -0.19
SPIN3-230ENST00000639888 C22orf23Q9BZE7 217 aa13.86□□□□□ -0.19
SPIN3-230ENST00000639888 ISY1Q9ULR0 285 aaKnown RBP13.85□□□□□ -0.19
SPIN3-230ENST00000639888 CCDC146Q8IYE0 955 aa13.84□□□□□ -0.19
SPIN3-230ENST00000639888 C20orf194Q5TEA3 1177 aa13.84□□□□□ -0.19
SPIN3-230ENST00000639888 BIVM-ERCC5R4GMW8 1640 aa13.84□□□□□ -0.19
SPIN3-230ENST00000639888 DRC7Q8IY82 874 aa13.84□□□□□ -0.19
SPIN3-230ENST00000639888 VGLL3A8MV65 326 aa13.83□□□□□ -0.2
SPIN3-230ENST00000639888 CAVIN1Q6NZI2 390 aaKnown RBP13.82□□□□□ -0.2
SPIN3-230ENST00000639888 KIF15Q9NS87 1388 aa13.82□□□□□ -0.2
SPIN3-230ENST00000639888 AEBP1Q8IUX7 1158 aa13.82□□□□□ -0.2
SPIN3-230ENST00000639888 E9PSI1 815 aa13.81□□□□□ -0.2
SPIN3-230ENST00000639888 CHMP4AQ9BY43 222 aa13.81□□□□□ -0.2
SPIN3-230ENST00000639888 MCTP1Q6DN14 999 aa13.81□□□□□ -0.2
SPIN3-230ENST00000639888 CHMP7Q8WUX9 453 aaPredicted RBP13.81□□□□□ -0.2
SPIN3-230ENST00000639888 BCL2L13Q9BXK5 485 aa13.81□□□□□ -0.2
SPIN3-230ENST00000639888 APPP05067 770 aa13.8□□□□□ -0.2
SPIN3-230ENST00000639888 TBC1D2Q9BYX2 928 aa13.8□□□□□ -0.2
SPIN3-230ENST00000639888 IGSF3O75054 1194 aa13.8□□□□□ -0.2
SPIN3-230ENST00000639888 FOXD4L6Q3SYB3 417 aaPredicted RBP13.8□□□□□ -0.2
SPIN3-230ENST00000639888 FOXD4L3Q6VB84 417 aaPredicted RBP13.8□□□□□ -0.2
SPIN3-230ENST00000639888 PDS5BQ9NTI5 1447 aa13.8□□□□□ -0.2
SPIN3-230ENST00000639888 ST20-MTHFSA0A0A6YYL1 179 aa13.79□□□□□ -0.2
SPIN3-230ENST00000639888 PAXIP1Q6ZW49 1069 aaPredicted RBP13.79□□□□□ -0.2
SPIN3-230ENST00000639888 TIAM1Q13009 1591 aa13.79□□□□□ -0.2
SPIN3-230ENST00000639888 CCDC39Q9UFE4 941 aa13.78□□□□□ -0.2
SPIN3-230ENST00000639888 CGNL1Q0VF96 1302 aa13.78□□□□□ -0.2
SPIN3-230ENST00000639888 CENPJQ9HC77 1338 aaPredicted RBP13.78□□□□□ -0.2
SPIN3-230ENST00000639888 SMAP1Q8IYB5 467 aaPredicted RBP13.78□□□□□ -0.2
SPIN3-230ENST00000639888 CFDP1Q9UEE9 299 aaPredicted RBP13.78□□□□□ -0.2
SPIN3-230ENST00000639888 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.2
SPIN3-230ENST00000639888 PANK1Q8TE04 598 aa13.77□□□□□ -0.21
SPIN3-230ENST00000639888 CCDC66A2RUB6 948 aa13.77□□□□□ -0.21
SPIN3-230ENST00000639888 SYAP1Q96A49 352 aaPredicted RBP13.77□□□□□ -0.21
SPIN3-230ENST00000639888 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
SPIN3-230ENST00000639888 HMGN5P82970 282 aaKnown RBP13.76□□□□□ -0.21
SPIN3-230ENST00000639888 C8orf34Q49A92 452 aa13.76□□□□□ -0.21
SPIN3-230ENST00000639888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.76□□□□□ -0.21
SPIN3-230ENST00000639888 CASKIN1Q8WXD9 1431 aa13.76□□□□□ -0.21
SPIN3-230ENST00000639888 OFD1O75665 1012 aa13.75□□□□□ -0.21
SPIN3-230ENST00000639888 CCDC18Q5T9S5 1454 aa13.75□□□□□ -0.21
SPIN3-230ENST00000639888 DYNC1I1O14576 645 aa13.75□□□□□ -0.21
SPIN3-230ENST00000639888 SASS6Q6UVJ0 657 aa13.75□□□□□ -0.21
SPIN3-230ENST00000639888 ITPRIPQ8IWB1 547 aa13.75□□□□□ -0.21
SPIN3-230ENST00000639888 TRERF1Q96PN7 1200 aa13.74□□□□□ -0.21
SPIN3-230ENST00000639888 PPP4R3BQ5MIZ7 849 aa13.74□□□□□ -0.21
SPIN3-230ENST00000639888 CASC1Q6TDU7 716 aa13.74□□□□□ -0.21
SPIN3-230ENST00000639888 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
SPIN3-230ENST00000639888 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
SPIN3-230ENST00000639888 PDCL2Q8N4E4 241 aa13.73□□□□□ -0.21
SPIN3-230ENST00000639888 NESP48681 1621 aa13.73□□□□□ -0.21
SPIN3-230ENST00000639888 ROCK2O75116 1388 aaKnown RBP13.73□□□□□ -0.21
SPIN3-230ENST00000639888 USP47Q96K76 1375 aa13.73□□□□□ -0.21
SPIN3-230ENST00000639888 KCNJ4P48050 445 aa13.73□□□□□ -0.21
SPIN3-230ENST00000639888 ZNF592Q92610 1267 aa13.73□□□□□ -0.21
SPIN3-230ENST00000639888 TAF3Q5VWG9 929 aa13.73□□□□□ -0.21
SPIN3-230ENST00000639888 ERICH4A6NGS2 130 aa13.72□□□□□ -0.21
SPIN3-230ENST00000639888 TAF7LQ5H9L4 462 aa13.72□□□□□ -0.21
SPIN3-230ENST00000639888 NBPF8Q3BBV2 869 aa13.72□□□□□ -0.21
SPIN3-230ENST00000639888 KIF3AQ9Y496 699 aa13.72□□□□□ -0.21
SPIN3-230ENST00000639888 APAF1O14727 1248 aa13.72□□□□□ -0.21
SPIN3-230ENST00000639888 DIAPH3Q9NSV4 1193 aa13.72□□□□□ -0.21
SPIN3-230ENST00000639888 GAPVD1Q14C86 1478 aa13.71□□□□□ -0.21
SPIN3-230ENST00000639888 FYCO1Q9BQS8 1478 aa13.71□□□□□ -0.21
SPIN3-230ENST00000639888 NOL8Q76FK4 1167 aaKnown RBP13.71□□□□□ -0.21
SPIN3-230ENST00000639888 PDZRN3Q9UPQ7 1066 aa13.71□□□□□ -0.21
SPIN3-230ENST00000639888 POLA1P09884 1462 aaPredicted RBP13.71□□□□□ -0.21
SPIN3-230ENST00000639888 BCAR3O75815 825 aa13.71□□□□□ -0.22
SPIN3-230ENST00000639888 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
SPIN3-230ENST00000639888 PRPF40AO75400 957 aaKnown RBP13.7□□□□□ -0.22
SPIN3-230ENST00000639888 PKD2Q13563 968 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms