RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 COL9A1P20849 921 aa6.56□□□□□ -1.36
GYPB-216ENST00000638448 FBXW7Q969H0 707 aa6.56□□□□□ -1.36
GYPB-216ENST00000638448 STAC3Q96MF2 364 aa6.56□□□□□ -1.36
GYPB-216ENST00000638448 HCSTQ9UBK5 93 aa6.56□□□□□ -1.36
GYPB-216ENST00000638448 BHMG1C9JSJ3 638 aaPredicted RBP6.55□□□□□ -1.36
GYPB-216ENST00000638448 PDIA6Q15084 440 aa6.55□□□□□ -1.36
GYPB-216ENST00000638448 DDX12PQ92771 950 aa6.55□□□□□ -1.36
GYPB-216ENST00000638448 TSHZ2Q9NRE2 1034 aa6.55□□□□□ -1.36
GYPB-216ENST00000638448 E2F4Q16254 413 aa6.54□□□□□ -1.36
GYPB-216ENST00000638448 PROX2Q3B8N5 592 aa6.54□□□□□ -1.36
GYPB-216ENST00000638448 RBM33Q96EV2 1170 aaKnown RBP6.53□□□□□ -1.36
GYPB-216ENST00000638448 EPAS1Q99814 870 aa6.53□□□□□ -1.36
GYPB-216ENST00000638448 NBR1Q14596 966 aa6.52□□□□□ -1.37
GYPB-216ENST00000638448 MRPL50Q8N5N7 158 aaKnown RBP6.52□□□□□ -1.37
GYPB-216ENST00000638448 NBPF3Q9H094 633 aa6.52□□□□□ -1.37
GYPB-216ENST00000638448 WDR70Q9NW82 654 aa6.52□□□□□ -1.37
GYPB-216ENST00000638448 C6orf132Q5T0Z8 1188 aa6.51□□□□□ -1.37
GYPB-216ENST00000638448 SPDYE16A6NNV3 312 aaPredicted RBP6.5□□□□□ -1.37
GYPB-216ENST00000638448 PTPN5P54829 565 aa6.5□□□□□ -1.37
GYPB-216ENST00000638448 EN1Q05925 392 aaPredicted RBP6.5□□□□□ -1.37
GYPB-216ENST00000638448 THSD4Q6ZMP0 1018 aa6.5□□□□□ -1.37
GYPB-216ENST00000638448 PLA2G2EQ9NZK7 142 aa6.5□□□□□ -1.37
GYPB-216ENST00000638448 RABGEF1Q9UJ41 708 aa6.5□□□□□ -1.37
GYPB-216ENST00000638448 ARIH1Q9Y4X5 557 aaPredicted RBP6.5□□□□□ -1.37
GYPB-216ENST00000638448 GOLGA8CPA6NN73 597 aa6.49□□□□□ -1.37
GYPB-216ENST00000638448 MAP3K7O43318 606 aa6.49□□□□□ -1.37
GYPB-216ENST00000638448 PRIM1P49642 420 aaKnown RBP6.49□□□□□ -1.37
GYPB-216ENST00000638448 TSR1Q2NL82 804 aaKnown RBP6.49□□□□□ -1.37
GYPB-216ENST00000638448 WNT2BQ93097 391 aa6.49□□□□□ -1.37
GYPB-216ENST00000638448 TRIM6-TRIM34B2RNG4 842 aa6.47□□□□□ -1.37
GYPB-216ENST00000638448 KIAA1468Q9P260 1216 aa6.47□□□□□ -1.37
GYPB-216ENST00000638448 GRXCR2A6NFK2 248 aa6.46□□□□□ -1.38
GYPB-216ENST00000638448 SEPT9Q9UHD8 586 aaPredicted RBP6.46□□□□□ -1.38
GYPB-216ENST00000638448 PRKCSHP14314 528 aaPredicted RBP6.45□□□□□ -1.38
GYPB-216ENST00000638448 TPRNQ4KMQ1 711 aa6.45□□□□□ -1.38
GYPB-216ENST00000638448 ANKK1Q8NFD2 765 aa6.45□□□□□ -1.38
GYPB-216ENST00000638448 BCAMP50895 628 aa6.44□□□□□ -1.38
GYPB-216ENST00000638448 LAPTM4BQ86VI4 370 aa6.44□□□□□ -1.38
GYPB-216ENST00000638448 CDHR5Q9HBB8 845 aa6.44□□□□□ -1.38
GYPB-216ENST00000638448 ONECUT3O60422 494 aaPredicted RBP6.43□□□□□ -1.38
GYPB-216ENST00000638448 KCNV2Q8TDN2 545 aa6.43□□□□□ -1.38
GYPB-216ENST00000638448 ZFRQ96KR1 1074 aaKnown RBP6.43□□□□□ -1.38
GYPB-216ENST00000638448 TSKSQ9UJT2 592 aa6.43□□□□□ -1.38
GYPB-216ENST00000638448 OSBPP22059 807 aa6.42□□□□□ -1.38
GYPB-216ENST00000638448 SOWAHBA6NEL2 793 aa6.41□□□□□ -1.38
GYPB-216ENST00000638448 FAM98CQ17RN3 349 aaKnown RBP6.41□□□□□ -1.38
GYPB-216ENST00000638448 FAM198AQ9UFP1 575 aa6.41□□□□□ -1.38
GYPB-216ENST00000638448 PRSS12P56730 875 aa6.4□□□□□ -1.38
GYPB-216ENST00000638448 CDCA7LQ96GN5 454 aa6.4□□□□□ -1.38
GYPB-216ENST00000638448 C3orf80F5H4A9 247 aa6.39□□□□□ -1.39
GYPB-216ENST00000638448 PACS2Q86VP3 889 aa6.39□□□□□ -1.39
GYPB-216ENST00000638448 ARHGEF1Q92888 912 aaKnown RBP6.39□□□□□ -1.39
GYPB-216ENST00000638448 SMAPO00193 183 aa6.38□□□□□ -1.39
GYPB-216ENST00000638448 MLLT3P42568 568 aaPredicted RBP6.38□□□□□ -1.39
GYPB-216ENST00000638448 P3H3Q8IVL6 736 aa6.38□□□□□ -1.39
GYPB-216ENST00000638448 CERKQ8TCT0 537 aa6.38□□□□□ -1.39
GYPB-216ENST00000638448 LRCH3Q96II8 777 aa6.37□□□□□ -1.39
GYPB-216ENST00000638448 WBP1LQ9NX94 342 aa6.37□□□□□ -1.39
GYPB-216ENST00000638448 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.37□□□□□ -1.39
GYPB-216ENST00000638448 NBPF26B4DH59 902 aa6.36□□□□□ -1.39
GYPB-216ENST00000638448 IFFO2Q5TF58 517 aa6.36□□□□□ -1.39
GYPB-216ENST00000638448 HPS5Q9UPZ3 1129 aa6.36□□□□□ -1.39
GYPB-216ENST00000638448 PADI6Q6TGC4 694 aa6.35□□□□□ -1.39
GYPB-216ENST00000638448 TATDN2Q93075 761 aa6.35□□□□□ -1.39
GYPB-216ENST00000638448 NPDC1Q9NQX5 325 aaPredicted RBP6.35□□□□□ -1.39
GYPB-216ENST00000638448 RBM27Q9P2N5 1060 aaKnown RBP6.35□□□□□ -1.39
GYPB-216ENST00000638448 PNMA3Q9UL41 463 aa6.35□□□□□ -1.39
GYPB-216ENST00000638448 A0A0G2JS52 829 aa6.34□□□□□ -1.39
GYPB-216ENST00000638448 ITGBL1O95965 494 aaPredicted RBP6.34□□□□□ -1.39
GYPB-216ENST00000638448 SAMD7Q7Z3H4 446 aa6.34□□□□□ -1.39
GYPB-216ENST00000638448 TSR3Q9UJK0 312 aaKnown RBP6.34□□□□□ -1.39
GYPB-216ENST00000638448 NYAP1Q6ZVC0 841 aa6.33□□□□□ -1.4
GYPB-216ENST00000638448 NUDT18Q6ZVK8 323 aa6.33□□□□□ -1.4
GYPB-216ENST00000638448 TTC13Q8NBP0 860 aa6.33□□□□□ -1.4
GYPB-216ENST00000638448 SEMA3EO15041 775 aa6.3□□□□□ -1.4
GYPB-216ENST00000638448 RNF40O75150 1001 aa6.3□□□□□ -1.4
GYPB-216ENST00000638448 RGS20O76081 388 aa6.29□□□□□ -1.4
GYPB-216ENST00000638448 PPP4CP60510 307 aa6.29□□□□□ -1.4
GYPB-216ENST00000638448 PTGDRQ13258 359 aa6.29□□□□□ -1.4
GYPB-216ENST00000638448 NUTM2FA1L443 756 aa6.27□□□□□ -1.41
GYPB-216ENST00000638448 KCNC4Q03721 635 aa6.27□□□□□ -1.41
GYPB-216ENST00000638448 SWT1Q5T5J6 900 aaKnown RBP6.27□□□□□ -1.41
GYPB-216ENST00000638448 EYA1Q99502 592 aa6.26□□□□□ -1.41
GYPB-216ENST00000638448 TESPA1A2RU30 521 aaPredicted RBP6.25□□□□□ -1.41
GYPB-216ENST00000638448 APLP1P51693 650 aa6.25□□□□□ -1.41
GYPB-216ENST00000638448 ADGRG1Q9Y653 693 aa6.25□□□□□ -1.41
GYPB-216ENST00000638448 HDGFP51858 240 aaKnown RBP6.24□□□□□ -1.41
GYPB-216ENST00000638448 FAM161AQ3B820 660 aa6.24□□□□□ -1.41
GYPB-216ENST00000638448 TJAP1Q5JTD0 557 aa6.24□□□□□ -1.41
GYPB-216ENST00000638448 MTRQ99707 1265 aa6.24□□□□□ -1.41
GYPB-216ENST00000638448 FCHSD2O94868 740 aa6.23□□□□□ -1.41
GYPB-216ENST00000638448 RBM26Q5T8P6 1007 aaKnown RBP6.23□□□□□ -1.41
GYPB-216ENST00000638448 SLF2Q8IX21 1173 aa6.23□□□□□ -1.41
GYPB-216ENST00000638448 DNAJB2P25686 324 aa6.22□□□□□ -1.41
GYPB-216ENST00000638448 ERICH6Q7L0X2 663 aa6.22□□□□□ -1.41
GYPB-216ENST00000638448 RBM46Q8TBY0 533 aaKnown RBP6.21□□□□□ -1.42
GYPB-216ENST00000638448 NECTIN2Q92692 538 aa6.21□□□□□ -1.42
GYPB-216ENST00000638448 TMEM134Q9H6X4 195 aa6.21□□□□□ -1.42
GYPB-216ENST00000638448 IL21Q9HBE4 155 aa6.21□□□□□ -1.42
GYPB-216ENST00000638448 TULP1O00294 542 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms