RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
KCNMA1-228ENST00000638223 FRAT1Q92837 279 aaPredicted RBP12.91□□□□□ -0.34
KCNMA1-228ENST00000638223 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
KCNMA1-228ENST00000638223 PANK3Q9H999 370 aa12.91□□□□□ -0.34
KCNMA1-228ENST00000638223 RRBP1Q9P2E9 1410 aaKnown RBP12.91□□□□□ -0.34
KCNMA1-228ENST00000638223 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.91□□□□□ -0.34
KCNMA1-228ENST00000638223 PCF11O94913 1555 aaKnown RBP12.91□□□□□ -0.34
KCNMA1-228ENST00000638223 SUPT16HQ9Y5B9 1047 aaKnown RBP12.9□□□□□ -0.34
KCNMA1-228ENST00000638223 USP47Q96K76 1375 aa12.9□□□□□ -0.34
KCNMA1-228ENST00000638223 CHD1O14646 1710 aa12.9□□□□□ -0.35
KCNMA1-228ENST00000638223 AMPHP49418 695 aa12.89□□□□□ -0.35
KCNMA1-228ENST00000638223 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
KCNMA1-228ENST00000638223 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
KCNMA1-228ENST00000638223 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
KCNMA1-228ENST00000638223 DAPK1P53355 1430 aa12.87□□□□□ -0.35
KCNMA1-228ENST00000638223 SLC26A8Q96RN1 970 aa12.87□□□□□ -0.35
KCNMA1-228ENST00000638223 FTSJ3Q8IY81 847 aaKnown RBP12.87□□□□□ -0.35
KCNMA1-228ENST00000638223 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
KCNMA1-228ENST00000638223 CENPJQ9HC77 1338 aaPredicted RBP12.86□□□□□ -0.35
KCNMA1-228ENST00000638223 CEBPAP49715 358 aaPredicted RBP12.86□□□□□ -0.35
KCNMA1-228ENST00000638223 ADGRL1O94910 1474 aa12.85□□□□□ -0.35
KCNMA1-228ENST00000638223 RALBP1Q15311 655 aa12.85□□□□□ -0.35
KCNMA1-228ENST00000638223 NBPF1Q3BBV0 1214 aa12.84□□□□□ -0.35
KCNMA1-228ENST00000638223 THEMISQ8N1K5 641 aaPredicted RBP12.84□□□□□ -0.35
KCNMA1-228ENST00000638223 NPHP1O15259 732 aa12.84□□□□□ -0.35
KCNMA1-228ENST00000638223 SLC52A1Q9NWF4 448 aa12.83□□□□□ -0.36
KCNMA1-228ENST00000638223 CCDC146Q8IYE0 955 aa12.83□□□□□ -0.36
KCNMA1-228ENST00000638223 PSME1Q06323 249 aa12.82□□□□□ -0.36
KCNMA1-228ENST00000638223 SUPT6HQ7KZ85 1726 aaKnown RBP12.82□□□□□ -0.36
KCNMA1-228ENST00000638223 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
KCNMA1-228ENST00000638223 ATP10BO94823 1461 aa12.82□□□□□ -0.36
KCNMA1-228ENST00000638223 CEP170Q5SW79 1584 aa12.82□□□□□ -0.36
KCNMA1-228ENST00000638223 CCER2I3L3R5 266 aa12.82□□□□□ -0.36
KCNMA1-228ENST00000638223 CCDC141Q6ZP82 1450 aa12.82□□□□□ -0.36
KCNMA1-228ENST00000638223 ATF3P18847 181 aa12.81□□□□□ -0.36
KCNMA1-228ENST00000638223 RTL5Q5HYW3 569 aaPredicted RBP12.81□□□□□ -0.36
KCNMA1-228ENST00000638223 PROSER2Q86WR7 435 aaPredicted RBP12.81□□□□□ -0.36
KCNMA1-228ENST00000638223 COG3Q96JB2 828 aa12.81□□□□□ -0.36
KCNMA1-228ENST00000638223 ZNF330Q9Y3S2 320 aaPredicted RBP12.81□□□□□ -0.36
KCNMA1-228ENST00000638223 SHROOM2Q13796 1616 aa12.81□□□□□ -0.36
KCNMA1-228ENST00000638223 HFM1A2PYH4 1435 aa12.81□□□□□ -0.36
KCNMA1-228ENST00000638223 NLRP13Q86W25 1043 aa12.81□□□□□ -0.36
KCNMA1-228ENST00000638223 FBXO31Q5XUX0 539 aaPredicted RBP12.81□□□□□ -0.36
KCNMA1-228ENST00000638223 ASXL2Q76L83 1435 aa12.81□□□□□ -0.36
KCNMA1-228ENST00000638223 POGZQ7Z3K3 1410 aa12.8□□□□□ -0.36
KCNMA1-228ENST00000638223 NUTM2GQ5VZR2 741 aa12.8□□□□□ -0.36
KCNMA1-228ENST00000638223 FANCAO15360 1455 aa12.8□□□□□ -0.36
KCNMA1-228ENST00000638223 CAMSAP2Q08AD1 1489 aa12.79□□□□□ -0.36
KCNMA1-228ENST00000638223 STAC3Q96MF2 364 aa12.79□□□□□ -0.36
KCNMA1-228ENST00000638223 ABCC5O15440 1437 aa12.79□□□□□ -0.36
KCNMA1-228ENST00000638223 SAMD9Q5K651 1589 aa12.79□□□□□ -0.36
KCNMA1-228ENST00000638223 UPF2Q9HAU5 1272 aaKnown RBP12.79□□□□□ -0.36
KCNMA1-228ENST00000638223 NAIPQ13075 1403 aa12.79□□□□□ -0.36
KCNMA1-228ENST00000638223 KIAA1107Q9UPP5 1409 aa12.79□□□□□ -0.36
KCNMA1-228ENST00000638223 ANP32AP39687 249 aaKnown RBP12.79□□□□□ -0.36
KCNMA1-228ENST00000638223 PRAM1Q96QH2 718 aa12.79□□□□□ -0.36
KCNMA1-228ENST00000638223 CGNL1Q0VF96 1302 aa12.79□□□□□ -0.36
KCNMA1-228ENST00000638223 NBPF8Q3BBV2 869 aa12.78□□□□□ -0.36
KCNMA1-228ENST00000638223 ANKLE2Q86XL3 938 aa12.78□□□□□ -0.36
KCNMA1-228ENST00000638223 RRP7AQ9Y3A4 280 aaKnown RBP12.77□□□□□ -0.36
KCNMA1-228ENST00000638223 DENND4BO75064 1496 aaPredicted RBP12.77□□□□□ -0.37
KCNMA1-228ENST00000638223 HSP90AA1P07900 732 aaKnown RBP12.77□□□□□ -0.37
KCNMA1-228ENST00000638223 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.37
KCNMA1-228ENST00000638223 KIF14Q15058 1648 aa12.77□□□□□ -0.37
KCNMA1-228ENST00000638223 PMFBP1Q8TBY8 1022 aa12.76□□□□□ -0.37
KCNMA1-228ENST00000638223 GGNBP2Q9H3C7 697 aa12.76□□□□□ -0.37
KCNMA1-228ENST00000638223 NUP153P49790 1475 aaKnown RBP12.76□□□□□ -0.37
KCNMA1-228ENST00000638223 LRRIQ1Q96JM4 1722 aa12.76□□□□□ -0.37
KCNMA1-228ENST00000638223 AKNAQ7Z591 1439 aa12.75□□□□□ -0.37
KCNMA1-228ENST00000638223 EVA1CP58658 441 aa12.75□□□□□ -0.37
KCNMA1-228ENST00000638223 NUP160Q12769 1436 aa12.75□□□□□ -0.37
KCNMA1-228ENST00000638223 ESCO1Q5FWF5 840 aa12.74□□□□□ -0.37
KCNMA1-228ENST00000638223 KIF7Q2M1P5 1343 aa12.74□□□□□ -0.37
KCNMA1-228ENST00000638223 IDI1Q13907 227 aa12.74□□□□□ -0.37
KCNMA1-228ENST00000638223 PRKRIP1Q9H875 184 aaPredicted RBP12.74□□□□□ -0.37
KCNMA1-228ENST00000638223 GPATCH8Q9UKJ3 1502 aaKnown RBP12.73□□□□□ -0.37
KCNMA1-228ENST00000638223 NCOA1Q15788 1441 aa12.73□□□□□ -0.37
KCNMA1-228ENST00000638223 NLRP6P59044 892 aa12.73□□□□□ -0.37
KCNMA1-228ENST00000638223 ROCK1Q13464 1354 aa12.72□□□□□ -0.37
KCNMA1-228ENST00000638223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.72□□□□□ -0.37
KCNMA1-228ENST00000638223 ERBINQ96RT1 1412 aa12.72□□□□□ -0.37
KCNMA1-228ENST00000638223 RBM33Q96EV2 1170 aaKnown RBP12.71□□□□□ -0.37
KCNMA1-228ENST00000638223 SLC12A5Q9H2X9 1139 aa12.71□□□□□ -0.37
KCNMA1-228ENST00000638223 MYBBP1AQ9BQG0 1328 aaKnown RBP12.7□□□□□ -0.38
KCNMA1-228ENST00000638223 RGS3P49796 1198 aa12.7□□□□□ -0.38
KCNMA1-228ENST00000638223 OS9Q13438 667 aaPredicted RBP12.7□□□□□ -0.38
KCNMA1-228ENST00000638223 ELL2O00472 640 aaPredicted RBP12.7□□□□□ -0.38
KCNMA1-228ENST00000638223 RAPGEF6Q8TEU7 1601 aa12.7□□□□□ -0.38
KCNMA1-228ENST00000638223 PTPN23Q9H3S7 1636 aa12.7□□□□□ -0.38
KCNMA1-228ENST00000638223 UGGT2Q9NYU1 1516 aa12.69□□□□□ -0.38
KCNMA1-228ENST00000638223 PLCH2O75038 1416 aa12.69□□□□□ -0.38
KCNMA1-228ENST00000638223 CALD1Q05682 793 aaKnown RBP12.69□□□□□ -0.38
KCNMA1-228ENST00000638223 CCDC7Q96M83 1385 aa12.68□□□□□ -0.38
KCNMA1-228ENST00000638223 WDR7Q9Y4E6 1490 aa12.68□□□□□ -0.38
KCNMA1-228ENST00000638223 B4GALNT3Q6L9W6 998 aa12.68□□□□□ -0.38
KCNMA1-228ENST00000638223 ABTB2Q8N961 1025 aa12.67□□□□□ -0.38
KCNMA1-228ENST00000638223 MAP3K1Q13233 1512 aa12.67□□□□□ -0.38
KCNMA1-228ENST00000638223 CABP1Q9NZU7 370 aa12.67□□□□□ -0.38
KCNMA1-228ENST00000638223 KIAA0556O60303 1618 aa12.67□□□□□ -0.38
KCNMA1-228ENST00000638223 GOLGA2Q08379 1002 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms