RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 PKD2Q13563 968 aa21.22■□□□□ 0.99
CACNA1A-253ENST00000637927 ZNF592Q92610 1267 aa21.22■□□□□ 0.99
CACNA1A-253ENST00000637927 EVA1CP58658 441 aa21.21■□□□□ 0.99
CACNA1A-253ENST00000637927 ROCK2O75116 1388 aaKnown RBP21.2■□□□□ 0.98
CACNA1A-253ENST00000637927 CLUAP1Q96AJ1 413 aa21.2■□□□□ 0.98
CACNA1A-253ENST00000637927 SF3A1Q15459 793 aaKnown RBP21.2■□□□□ 0.98
CACNA1A-253ENST00000637927 TPM3P06753 285 aa21.19■□□□□ 0.98
CACNA1A-253ENST00000637927 PAF1Q8N7H5 531 aa21.18■□□□□ 0.98
CACNA1A-253ENST00000637927 MCTP1Q6DN14 999 aa21.17■□□□□ 0.98
CACNA1A-253ENST00000637927 RILPL2Q969X0 211 aa21.17■□□□□ 0.98
CACNA1A-253ENST00000637927 ZFYVE27Q5T4F4 411 aa21.15■□□□□ 0.98
CACNA1A-253ENST00000637927 NGDNQ8NEJ9 315 aaKnown RBP21.14■□□□□ 0.97
CACNA1A-253ENST00000637927 PPM1FP49593 454 aaPredicted RBP21.13■□□□□ 0.97
CACNA1A-253ENST00000637927 KTN1Q86UP2 1357 aaKnown RBP21.12■□□□□ 0.97
CACNA1A-253ENST00000637927 H3BQV1 296 aa21.12■□□□□ 0.97
CACNA1A-253ENST00000637927 IFFO2Q5TF58 517 aa21.12■□□□□ 0.97
CACNA1A-253ENST00000637927 RRP7AQ9Y3A4 280 aaKnown RBP21.12■□□□□ 0.97
CACNA1A-253ENST00000637927 SMC4Q9NTJ3 1288 aa21.11■□□□□ 0.97
CACNA1A-253ENST00000637927 ELL2O00472 640 aaPredicted RBP21.11■□□□□ 0.97
CACNA1A-253ENST00000637927 HNRNPMP52272 730 aaKnown RBP eCLIP21.11■□□□□ 0.97
CACNA1A-253ENST00000637927 CEP164Q9UPV0 1460 aa21.1■□□□□ 0.97
CACNA1A-253ENST00000637927 GPATCH3Q96I76 525 aa21.1■□□□□ 0.97
CACNA1A-253ENST00000637927 APPP05067 770 aa21.09■□□□□ 0.97
CACNA1A-253ENST00000637927 NAP1L1P55209 391 aaKnown RBP21.09■□□□□ 0.97
CACNA1A-253ENST00000637927 AMPHP49418 695 aa21.09■□□□□ 0.97
CACNA1A-253ENST00000637927 CUX2O14529 1486 aa21.09■□□□□ 0.97
CACNA1A-253ENST00000637927 AK7Q96M32 723 aa21.09■□□□□ 0.97
CACNA1A-253ENST00000637927 TMEM132AQ24JP5 1023 aa21.08■□□□□ 0.97
CACNA1A-253ENST00000637927 FAM177BA6PVY3 158 aa21.08■□□□□ 0.96
CACNA1A-253ENST00000637927 IPO8O15397 1037 aaKnown RBP21.07■□□□□ 0.96
CACNA1A-253ENST00000637927 STK31Q9BXU1 1019 aa21.07■□□□□ 0.96
CACNA1A-253ENST00000637927 SPAG9O60271 1321 aaKnown RBP21.07■□□□□ 0.96
CACNA1A-253ENST00000637927 EEA1Q15075 1411 aa21.06■□□□□ 0.96
CACNA1A-253ENST00000637927 SETQ01105 290 aaPredicted RBP21.06■□□□□ 0.96
CACNA1A-253ENST00000637927 CALRP27797 417 aaKnown RBP21.06■□□□□ 0.96
CACNA1A-253ENST00000637927 RCAN3Q9UKA8 241 aa21.06■□□□□ 0.96
CACNA1A-253ENST00000637927 KIF3BO15066 747 aa21.05■□□□□ 0.96
CACNA1A-253ENST00000637927 STK11IPQ8N1F8 1099 aa21.05■□□□□ 0.96
CACNA1A-253ENST00000637927 AKAP17AQ02040 695 aaKnown RBP21.05■□□□□ 0.96
CACNA1A-253ENST00000637927 TTLL5Q6EMB2 1281 aa21.04■□□□□ 0.96
CACNA1A-253ENST00000637927 VPS37DQ86XT2 251 aa21.04■□□□□ 0.96
CACNA1A-253ENST00000637927 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
CACNA1A-253ENST00000637927 CCDC43Q96MW1 224 aaKnown RBP21.04■□□□□ 0.96
CACNA1A-253ENST00000637927 PLCD4Q9BRC7 762 aa21.04■□□□□ 0.96
CACNA1A-253ENST00000637927 EIF2S2P20042 333 aaKnown RBP21.04■□□□□ 0.96
CACNA1A-253ENST00000637927 TSR1Q2NL82 804 aaKnown RBP21.03■□□□□ 0.96
CACNA1A-253ENST00000637927 RRP12Q5JTH9 1297 aaKnown RBP21.02■□□□□ 0.96
CACNA1A-253ENST00000637927 TRAK1Q9UPV9 953 aa21.02■□□□□ 0.96
CACNA1A-253ENST00000637927 CHMP4CQ96CF2 233 aa21.02■□□□□ 0.96
CACNA1A-253ENST00000637927 GBP4Q96PP9 640 aa21.01■□□□□ 0.95
CACNA1A-253ENST00000637927 CARMIL1Q5VZK9 1371 aa21.01■□□□□ 0.95
CACNA1A-253ENST00000637927 KANK4Q5T7N3 995 aaPredicted RBP21.01■□□□□ 0.95
CACNA1A-253ENST00000637927 PLIN1O60240 522 aa21.01■□□□□ 0.95
CACNA1A-253ENST00000637927 FAM184AQ8NB25 1140 aa21.01■□□□□ 0.95
CACNA1A-253ENST00000637927 HTATSF1O43719 755 aaKnown RBP21■□□□□ 0.95
CACNA1A-253ENST00000637927 BCL2L13Q9BXK5 485 aa21■□□□□ 0.95
CACNA1A-253ENST00000637927 ARHGAP35Q9NRY4 1499 aa21■□□□□ 0.95
CACNA1A-253ENST00000637927 TCERG1O14776 1098 aaKnown RBP20.99■□□□□ 0.95
CACNA1A-253ENST00000637927 NUP155O75694 1391 aa20.99■□□□□ 0.95
CACNA1A-253ENST00000637927 RBM19Q9Y4C8 960 aaKnown RBP20.99■□□□□ 0.95
CACNA1A-253ENST00000637927 SOGA1O94964 1423 aa20.99■□□□□ 0.95
CACNA1A-253ENST00000637927 RWDD1Q9H446 243 aaPredicted RBP20.99■□□□□ 0.95
CACNA1A-253ENST00000637927 TNIKQ9UKE5 1360 aa20.98■□□□□ 0.95
CACNA1A-253ENST00000637927 EID1Q9Y6B2 187 aa20.98■□□□□ 0.95
CACNA1A-253ENST00000637927 KIF16BQ96L93 1317 aa20.98■□□□□ 0.95
CACNA1A-253ENST00000637927 ODF2Q5BJF6 829 aa20.98■□□□□ 0.95
CACNA1A-253ENST00000637927 CT47A1Q5JQC4 288 aaPredicted RBP20.98■□□□□ 0.95
CACNA1A-253ENST00000637927 NOL10Q9BSC4 688 aaKnown RBP20.98■□□□□ 0.95
CACNA1A-253ENST00000637927 IKQ13123 557 aaPredicted RBP20.97■□□□□ 0.95
CACNA1A-253ENST00000637927 MPHOSPH9Q99550 1183 aa20.96■□□□□ 0.95
CACNA1A-253ENST00000637927 DCAF8L1A6NGE4 600 aa20.96■□□□□ 0.95
CACNA1A-253ENST00000637927 TPM2P07951 284 aa20.96■□□□□ 0.95
CACNA1A-253ENST00000637927 CCDC27Q2M243 656 aa20.95■□□□□ 0.95
CACNA1A-253ENST00000637927 CCDC97Q96F63 343 aaPredicted RBP20.95■□□□□ 0.94
CACNA1A-253ENST00000637927 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
CACNA1A-253ENST00000637927 WASHC2CQ9Y4E1 1318 aa20.95■□□□□ 0.94
CACNA1A-253ENST00000637927 CHMP4BP1P59074 171 aa20.95■□□□□ 0.94
CACNA1A-253ENST00000637927 SETD5Q9C0A6 1442 aa20.94■□□□□ 0.94
CACNA1A-253ENST00000637927 CALD1Q05682 793 aaKnown RBP20.94■□□□□ 0.94
CACNA1A-253ENST00000637927 ZNF771Q7L3S4 317 aaPredicted RBP20.94■□□□□ 0.94
CACNA1A-253ENST00000637927 HSP90AB2PQ58FF8 381 aa20.94■□□□□ 0.94
CACNA1A-253ENST00000637927 CCAR1Q8IX12 1150 aaKnown RBP20.94■□□□□ 0.94
CACNA1A-253ENST00000637927 SYAP1Q96A49 352 aaPredicted RBP20.92■□□□□ 0.94
CACNA1A-253ENST00000637927 NFXL1Q6ZNB6 911 aa20.91■□□□□ 0.94
CACNA1A-253ENST00000637927 GOLGA6L3A6NEY3 463 aa20.9■□□□□ 0.94
CACNA1A-253ENST00000637927 CCDC34Q96HJ3 373 aa20.9■□□□□ 0.94
CACNA1A-253ENST00000637927 FHAD1B1AJZ9 1412 aa20.9■□□□□ 0.94
CACNA1A-253ENST00000637927 MYCNP04198 464 aaPredicted RBP20.9■□□□□ 0.94
CACNA1A-253ENST00000637927 PLCD3Q8N3E9 789 aa20.89■□□□□ 0.94
CACNA1A-253ENST00000637927 USP35Q9P2H5 1018 aa20.89■□□□□ 0.94
CACNA1A-253ENST00000637927 GOLGA6L19H0YKK7 550 aa20.88■□□□□ 0.93
CACNA1A-253ENST00000637927 AMOTL1Q8IY63 956 aa20.88■□□□□ 0.93
CACNA1A-253ENST00000637927 PMFBP1Q8TBY8 1022 aa20.88■□□□□ 0.93
CACNA1A-253ENST00000637927 SYNE3Q6ZMZ3 975 aa20.86■□□□□ 0.93
CACNA1A-253ENST00000637927 TERF2IPQ9NYB0 399 aa20.86■□□□□ 0.93
CACNA1A-253ENST00000637927 C1orf141Q5JVX7 400 aa20.86■□□□□ 0.93
CACNA1A-253ENST00000637927 TIMELESSQ9UNS1 1208 aa20.85■□□□□ 0.93
CACNA1A-253ENST00000637927 R3HCC1Q9Y3T6 440 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-253ENST00000637927 BECN2A8MW95 431 aa20.85■□□□□ 0.93
CACNA1A-253ENST00000637927 ANKRD62A6NC57 917 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms