RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 U2AF1L5P0DN76 240 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-240ENST00000637432 U2AF1Q01081 240 aaKnown RBP eCLIP20.2■□□□□ 0.82
CACNA1A-240ENST00000637432 PTMSP20962 102 aa20.2■□□□□ 0.82
CACNA1A-240ENST00000637432 NOP58Q9Y2X3 529 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-240ENST00000637432 SETQ01105 290 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-240ENST00000637432 MCTP1Q6DN14 999 aa20.2■□□□□ 0.82
CACNA1A-240ENST00000637432 TMF1P82094 1093 aa20.19■□□□□ 0.82
CACNA1A-240ENST00000637432 EIF4G1Q04637 1599 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-240ENST00000637432 CT47A1Q5JQC4 288 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-240ENST00000637432 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.18■□□□□ 0.82
CACNA1A-240ENST00000637432 MFAP1P55081 439 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-240ENST00000637432 CCDC97Q96F63 343 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-240ENST00000637432 KDM4AO75164 1064 aa20.17■□□□□ 0.82
CACNA1A-240ENST00000637432 FOSBP53539 338 aa20.17■□□□□ 0.82
CACNA1A-240ENST00000637432 ZCCHC6Q5VYS8 1495 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-240ENST00000637432 IKQ13123 557 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-240ENST00000637432 RILPL2Q969X0 211 aa20.16■□□□□ 0.82
CACNA1A-240ENST00000637432 NECTIN2Q92692 538 aa20.16■□□□□ 0.82
CACNA1A-240ENST00000637432 NAP1L1P55209 391 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-240ENST00000637432 EID1Q9Y6B2 187 aa20.14■□□□□ 0.82
CACNA1A-240ENST00000637432 CALRP27797 417 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-240ENST00000637432 SKIDA1Q1XH10 827 aa20.14■□□□□ 0.81
CACNA1A-240ENST00000637432 FAM184AQ8NB25 1140 aa20.13■□□□□ 0.81
CACNA1A-240ENST00000637432 KIF16BQ96L93 1317 aa20.13■□□□□ 0.81
CACNA1A-240ENST00000637432 SYAP1Q96A49 352 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-240ENST00000637432 WWC2Q6AWC2 1192 aa20.12■□□□□ 0.81
CACNA1A-240ENST00000637432 IPO8O15397 1037 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-240ENST00000637432 GBP4Q96PP9 640 aa20.11■□□□□ 0.81
CACNA1A-240ENST00000637432 RBM33Q96EV2 1170 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-240ENST00000637432 SYNE3Q6ZMZ3 975 aa20.1■□□□□ 0.81
CACNA1A-240ENST00000637432 PPP4R2Q9NY27 417 aa20.09■□□□□ 0.81
CACNA1A-240ENST00000637432 C1orf141Q5JVX7 400 aa20.09■□□□□ 0.81
CACNA1A-240ENST00000637432 ZNF592Q92610 1267 aa20.09■□□□□ 0.81
CACNA1A-240ENST00000637432 HSP90AB2PQ58FF8 381 aa20.08■□□□□ 0.8
CACNA1A-240ENST00000637432 CCDC27Q2M243 656 aa20.07■□□□□ 0.8
CACNA1A-240ENST00000637432 CCDC180Q9P1Z9 1646 aa20.07■□□□□ 0.8
CACNA1A-240ENST00000637432 SMC4Q9NTJ3 1288 aa20.06■□□□□ 0.8
CACNA1A-240ENST00000637432 EPS15P42566 896 aa20.06■□□□□ 0.8
CACNA1A-240ENST00000637432 CCDC146Q8IYE0 955 aa20.06■□□□□ 0.8
CACNA1A-240ENST00000637432 USP35Q9P2H5 1018 aa20.05■□□□□ 0.8
CACNA1A-240ENST00000637432 PLIN1O60240 522 aa20.05■□□□□ 0.8
CACNA1A-240ENST00000637432 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-240ENST00000637432 TPM1P09493 284 aa20.05■□□□□ 0.8
CACNA1A-240ENST00000637432 EIF2S2P20042 333 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-240ENST00000637432 MYCNP04198 464 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-240ENST00000637432 CCDC70Q6NSX1 233 aa20.04■□□□□ 0.8
CACNA1A-240ENST00000637432 FAM177BA6PVY3 158 aa20.04■□□□□ 0.8
CACNA1A-240ENST00000637432 SF3B2Q13435 895 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-240ENST00000637432 CSPP1Q1MSJ5 1256 aa20.04■□□□□ 0.8
CACNA1A-240ENST00000637432 CLUAP1Q96AJ1 413 aa20.03■□□□□ 0.8
CACNA1A-240ENST00000637432 GOLGA6L19H0YKK7 550 aa20.03■□□□□ 0.8
CACNA1A-240ENST00000637432 CFAP44Q96MT7 982 aa20.03■□□□□ 0.8
CACNA1A-240ENST00000637432 NFXL1Q6ZNB6 911 aa20.03■□□□□ 0.8
CACNA1A-240ENST00000637432 SPDYE4A6NLX3 237 aa20.02■□□□□ 0.8
CACNA1A-240ENST00000637432 TRIM29Q14134 588 aa20.01■□□□□ 0.79
CACNA1A-240ENST00000637432 PAXIP1Q6ZW49 1069 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-240ENST00000637432 CHMP4BP1P59074 171 aa20.01■□□□□ 0.79
CACNA1A-240ENST00000637432 CALD1Q05682 793 aaKnown RBP20■□□□□ 0.79
CACNA1A-240ENST00000637432 SIN3AQ96ST3 1273 aa20■□□□□ 0.79
CACNA1A-240ENST00000637432 DHX37Q8IY37 1157 aaKnown RBP20■□□□□ 0.79
CACNA1A-240ENST00000637432 PLCD3Q8N3E9 789 aa19.99■□□□□ 0.79
CACNA1A-240ENST00000637432 FOXD1Q16676 465 aa19.99■□□□□ 0.79
CACNA1A-240ENST00000637432 TTC5Q8N0Z6 440 aa19.98■□□□□ 0.79
CACNA1A-240ENST00000637432 ELL2O00472 640 aaPredicted RBP19.97■□□□□ 0.79
CACNA1A-240ENST00000637432 ATP2B2Q01814 1243 aa19.97■□□□□ 0.79
CACNA1A-240ENST00000637432 HOMER1Q86YM7 354 aa19.95■□□□□ 0.78
CACNA1A-240ENST00000637432 TTLL5Q6EMB2 1281 aa19.94■□□□□ 0.78
CACNA1A-240ENST00000637432 BECN2A8MW95 431 aa19.94■□□□□ 0.78
CACNA1A-240ENST00000637432 HMMRO75330 724 aa19.94■□□□□ 0.78
CACNA1A-240ENST00000637432 ERICH2A1L162 156 aa19.94■□□□□ 0.78
CACNA1A-240ENST00000637432 ZNF428Q96B54 188 aa19.93■□□□□ 0.78
CACNA1A-240ENST00000637432 C9orf78Q9NZ63 289 aaPredicted RBP19.93■□□□□ 0.78
CACNA1A-240ENST00000637432 STK11IPQ8N1F8 1099 aa19.92■□□□□ 0.78
CACNA1A-240ENST00000637432 CCDC47Q96A33 483 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-240ENST00000637432 IPO7O95373 1038 aaKnown RBP19.91■□□□□ 0.78
CACNA1A-240ENST00000637432 ANKRD62A6NC57 917 aa19.91■□□□□ 0.78
CACNA1A-240ENST00000637432 KIF3AQ9Y496 699 aa19.91■□□□□ 0.78
CACNA1A-240ENST00000637432 PLCD4Q9BRC7 762 aa19.91■□□□□ 0.78
CACNA1A-240ENST00000637432 PHF14O94880 888 aa19.9■□□□□ 0.78
CACNA1A-240ENST00000637432 PSME1Q06323 249 aa19.9■□□□□ 0.78
CACNA1A-240ENST00000637432 RWDD1Q9H446 243 aaPredicted RBP19.89■□□□□ 0.78
CACNA1A-240ENST00000637432 RRP7AQ9Y3A4 280 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-240ENST00000637432 MAP7D2Q96T17 732 aa19.88■□□□□ 0.77
CACNA1A-240ENST00000637432 DEKP35659 375 aaKnown RBP19.88■□□□□ 0.77
CACNA1A-240ENST00000637432 NEFHP12036 1026 aa19.87■□□□□ 0.77
CACNA1A-240ENST00000637432 NUTM2BA6NNL0 878 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-240ENST00000637432 NUTM2EB1AL46 878 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-240ENST00000637432 NUTM2AQ8IVF1 878 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-240ENST00000637432 RUFY1Q96T51 708 aa19.87■□□□□ 0.77
CACNA1A-240ENST00000637432 ROCK2O75116 1388 aaKnown RBP19.87■□□□□ 0.77
CACNA1A-240ENST00000637432 RBM5P52756 815 aaKnown RBP eCLIP19.86■□□□□ 0.77
CACNA1A-240ENST00000637432 HDAC5Q9UQL6 1122 aa19.86■□□□□ 0.77
CACNA1A-240ENST00000637432 CPLX1O14810 134 aa19.86■□□□□ 0.77
CACNA1A-240ENST00000637432 ST18O60284 1047 aa19.86■□□□□ 0.77
CACNA1A-240ENST00000637432 ANKRD20A12PQ8NF67 263 aa19.85■□□□□ 0.77
CACNA1A-240ENST00000637432 TEFQ10587 303 aa19.85■□□□□ 0.77
CACNA1A-240ENST00000637432 TRDNQ13061 729 aa19.85■□□□□ 0.77
CACNA1A-240ENST00000637432 MATR3P43243 847 aaKnown RBP eCLIP19.85■□□□□ 0.77
CACNA1A-240ENST00000637432 PIP4K2BP78356 416 aa19.85■□□□□ 0.77
CACNA1A-240ENST00000637432 TMEM87AQ8NBN3 555 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms