RNA–Protein interactions for RNA: ENST00000636987.1

ARHGEF4-218, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 2

Gene ARHGEF4, Length 3,656 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-218ENST00000636987 WASHC2AQ641Q2 1341 aa13.41□□□□□ -0.26
ARHGEF4-218ENST00000636987 AKNAQ7Z591 1439 aa13.41□□□□□ -0.26
ARHGEF4-218ENST00000636987 C11orf95C9JLR9 678 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF4-218ENST00000636987 GLIPR1L2Q4G1C9 344 aa13.41□□□□□ -0.26
ARHGEF4-218ENST00000636987 NUDCQ9Y266 331 aa13.4□□□□□ -0.26
ARHGEF4-218ENST00000636987 RAPGEF3O95398 923 aa13.4□□□□□ -0.27
ARHGEF4-218ENST00000636987 PDE4AP27815 886 aa13.4□□□□□ -0.27
ARHGEF4-218ENST00000636987 GSE1Q14687 1217 aa13.4□□□□□ -0.27
ARHGEF4-218ENST00000636987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.39□□□□□ -0.27
ARHGEF4-218ENST00000636987 FOXD1Q16676 465 aa13.38□□□□□ -0.27
ARHGEF4-218ENST00000636987 DDRGK1Q96HY6 314 aa13.38□□□□□ -0.27
ARHGEF4-218ENST00000636987 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
ARHGEF4-218ENST00000636987 TTC37Q6PGP7 1564 aa13.37□□□□□ -0.27
ARHGEF4-218ENST00000636987 MAPKBP1O60336 1514 aa13.37□□□□□ -0.27
ARHGEF4-218ENST00000636987 EXOC6Q8TAG9 804 aa13.36□□□□□ -0.27
ARHGEF4-218ENST00000636987 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
ARHGEF4-218ENST00000636987 FANCAO15360 1455 aa13.35□□□□□ -0.27
ARHGEF4-218ENST00000636987 PLCH2O75038 1416 aa13.35□□□□□ -0.27
ARHGEF4-218ENST00000636987 TCERG1O14776 1098 aaKnown RBP13.34□□□□□ -0.27
ARHGEF4-218ENST00000636987 HAP1P54257 671 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF4-218ENST00000636987 SCAPERQ9BY12 1400 aa13.34□□□□□ -0.27
ARHGEF4-218ENST00000636987 MIA2Q96PC5 1412 aa13.34□□□□□ -0.27
ARHGEF4-218ENST00000636987 FRAT1Q92837 279 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF4-218ENST00000636987 NAP1L5Q96NT1 182 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF4-218ENST00000636987 CAMSAP2Q08AD1 1489 aa13.33□□□□□ -0.28
ARHGEF4-218ENST00000636987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.28
ARHGEF4-218ENST00000636987 SPAG9O60271 1321 aaKnown RBP13.33□□□□□ -0.28
ARHGEF4-218ENST00000636987 TSPOAP1O95153 1857 aa13.33□□□□□ -0.28
ARHGEF4-218ENST00000636987 NFKBIBQ15653 356 aa13.32□□□□□ -0.28
ARHGEF4-218ENST00000636987 CHMP4BQ9H444 224 aaKnown RBP13.32□□□□□ -0.28
ARHGEF4-218ENST00000636987 PTPN23Q9H3S7 1636 aa13.31□□□□□ -0.28
ARHGEF4-218ENST00000636987 SKAP1Q86WV1 359 aa13.31□□□□□ -0.28
ARHGEF4-218ENST00000636987 ADGRL1O94910 1474 aa13.31□□□□□ -0.28
ARHGEF4-218ENST00000636987 RGS3P49796 1198 aa13.31□□□□□ -0.28
ARHGEF4-218ENST00000636987 ARID4BQ4LE39 1312 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF4-218ENST00000636987 L3MBTL2Q969R5 705 aa13.3□□□□□ -0.28
ARHGEF4-218ENST00000636987 TAF7LQ5H9L4 462 aa13.29□□□□□ -0.28
ARHGEF4-218ENST00000636987 CHMP4AQ9BY43 222 aa13.29□□□□□ -0.28
ARHGEF4-218ENST00000636987 PTPRKQ15262 1439 aa13.28□□□□□ -0.28
ARHGEF4-218ENST00000636987 PLIN1O60240 522 aa13.28□□□□□ -0.28
ARHGEF4-218ENST00000636987 SYCP2Q9BX26 1530 aa13.28□□□□□ -0.28
ARHGEF4-218ENST00000636987 RCAN3Q9UKA8 241 aa13.28□□□□□ -0.28
ARHGEF4-218ENST00000636987 TRAPPC8Q9Y2L5 1435 aa13.28□□□□□ -0.28
ARHGEF4-218ENST00000636987 MLECQ14165 292 aa13.27□□□□□ -0.29
ARHGEF4-218ENST00000636987 CDC42BPAQ5VT25 1732 aa13.27□□□□□ -0.29
ARHGEF4-218ENST00000636987 ABCC5O15440 1437 aa13.27□□□□□ -0.29
ARHGEF4-218ENST00000636987 DAPK1P53355 1430 aa13.26□□□□□ -0.29
ARHGEF4-218ENST00000636987 RSPH4AQ5TD94 716 aa13.26□□□□□ -0.29
ARHGEF4-218ENST00000636987 RSPH6AQ9H0K4 717 aa13.26□□□□□ -0.29
ARHGEF4-218ENST00000636987 ITSN2Q9NZM3 1697 aa13.26□□□□□ -0.29
ARHGEF4-218ENST00000636987 MYO5CQ9NQX4 1742 aa13.26□□□□□ -0.29
ARHGEF4-218ENST00000636987 DIP2BQ9P265 1576 aa13.25□□□□□ -0.29
ARHGEF4-218ENST00000636987 CNTLNQ9NXG0 1405 aa13.25□□□□□ -0.29
ARHGEF4-218ENST00000636987 ANKRD30AQ9BXX3 1397 aa13.24□□□□□ -0.29
ARHGEF4-218ENST00000636987 C9orf84Q5VXU9 1444 aa13.24□□□□□ -0.29
ARHGEF4-218ENST00000636987 RRP1P56182 461 aaKnown RBP13.24□□□□□ -0.29
ARHGEF4-218ENST00000636987 ABCA9Q8IUA7 1624 aa13.24□□□□□ -0.29
ARHGEF4-218ENST00000636987 GGT6Q6P531 493 aa13.24□□□□□ -0.29
ARHGEF4-218ENST00000636987 BACH2Q9BYV9 841 aa13.23□□□□□ -0.29
ARHGEF4-218ENST00000636987 CDC42BPBQ9Y5S2 1711 aa13.23□□□□□ -0.29
ARHGEF4-218ENST00000636987 FRAT2O75474 233 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF4-218ENST00000636987 SAMD9LQ8IVG5 1584 aa13.23□□□□□ -0.29
ARHGEF4-218ENST00000636987 PREX2Q70Z35 1606 aa13.23□□□□□ -0.29
ARHGEF4-218ENST00000636987 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
ARHGEF4-218ENST00000636987 KIF3BO15066 747 aa13.23□□□□□ -0.29
ARHGEF4-218ENST00000636987 SLKQ9H2G2 1235 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF4-218ENST00000636987 ARHGEF12Q9NZN5 1544 aa13.22□□□□□ -0.29
ARHGEF4-218ENST00000636987 KIF15Q9NS87 1388 aa13.22□□□□□ -0.29
ARHGEF4-218ENST00000636987 PLEKHH2Q8IVE3 1493 aa13.22□□□□□ -0.29
ARHGEF4-218ENST00000636987 CCDC7Q96M83 1385 aa13.22□□□□□ -0.29
ARHGEF4-218ENST00000636987 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
ARHGEF4-218ENST00000636987 KDM2AQ9Y2K7 1162 aa13.21□□□□□ -0.29
ARHGEF4-218ENST00000636987 DENND4BO75064 1496 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF4-218ENST00000636987 TCOF1Q13428 1488 aaKnown RBP13.2□□□□□ -0.3
ARHGEF4-218ENST00000636987 TEX14Q8IWB6 1497 aa13.2□□□□□ -0.3
ARHGEF4-218ENST00000636987 TULP1O00294 542 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF4-218ENST00000636987 KIF7Q2M1P5 1343 aa13.2□□□□□ -0.3
ARHGEF4-218ENST00000636987 MBD5Q9P267 1494 aa13.2□□□□□ -0.3
ARHGEF4-218ENST00000636987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.2□□□□□ -0.3
ARHGEF4-218ENST00000636987 NAP1L2Q9ULW6 460 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF4-218ENST00000636987 GZF1Q9H116 711 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF4-218ENST00000636987 KIAA1107Q9UPP5 1409 aa13.19□□□□□ -0.3
ARHGEF4-218ENST00000636987 SPRYD3Q8NCJ5 442 aa13.17□□□□□ -0.3
ARHGEF4-218ENST00000636987 MPHOSPH9Q99550 1183 aa13.17□□□□□ -0.3
ARHGEF4-218ENST00000636987 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
ARHGEF4-218ENST00000636987 NCOA1Q15788 1441 aa13.17□□□□□ -0.3
ARHGEF4-218ENST00000636987 NEO1Q92859 1461 aa13.16□□□□□ -0.3
ARHGEF4-218ENST00000636987 ANKRD50Q9ULJ7 1429 aa13.16□□□□□ -0.3
ARHGEF4-218ENST00000636987 ABCC1P33527 1531 aa13.16□□□□□ -0.3
ARHGEF4-218ENST00000636987 CRBNQ96SW2 442 aa13.16□□□□□ -0.3
ARHGEF4-218ENST00000636987 SMG6Q86US8 1419 aaKnown RBP13.16□□□□□ -0.3
ARHGEF4-218ENST00000636987 ZNF518AQ6AHZ1 1483 aa13.16□□□□□ -0.3
ARHGEF4-218ENST00000636987 MS4A1P11836 297 aa13.16□□□□□ -0.3
ARHGEF4-218ENST00000636987 NAIPQ13075 1403 aa13.16□□□□□ -0.3
ARHGEF4-218ENST00000636987 HSP90AA2PQ14568 343 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF4-218ENST00000636987 HSP90AA1P07900 732 aaKnown RBP13.15□□□□□ -0.3
ARHGEF4-218ENST00000636987 BBXQ8WY36 941 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF4-218ENST00000636987 CANXP27824 592 aaKnown RBP13.15□□□□□ -0.31
ARHGEF4-218ENST00000636987 ESF1Q9H501 851 aaKnown RBP13.15□□□□□ -0.31
ARHGEF4-218ENST00000636987 NUP155O75694 1391 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms