RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 UHRF1BP1Q6BDS2 1440 aa11.11□□□□□ -0.63
CHD2-226ENST00000636881 RGS3P49796 1198 aa11.1□□□□□ -0.63
CHD2-226ENST00000636881 PARD3Q8TEW0 1356 aa11.1□□□□□ -0.63
CHD2-226ENST00000636881 CC2D1BQ5T0F9 858 aaKnown RBP11.1□□□□□ -0.63
CHD2-226ENST00000636881 C20orf194Q5TEA3 1177 aa11.1□□□□□ -0.63
CHD2-226ENST00000636881 DCAF11Q8TEB1 546 aa11.1□□□□□ -0.63
CHD2-226ENST00000636881 CFDP1Q9UEE9 299 aaPredicted RBP11.09□□□□□ -0.63
CHD2-226ENST00000636881 IQGAP2Q13576 1575 aa11.09□□□□□ -0.63
CHD2-226ENST00000636881 KDM2BQ8NHM5 1336 aa11.09□□□□□ -0.63
CHD2-226ENST00000636881 C8orf34Q49A92 452 aa11.08□□□□□ -0.64
CHD2-226ENST00000636881 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.08□□□□□ -0.64
CHD2-226ENST00000636881 E9PCH4 1651 aa11.08□□□□□ -0.64
CHD2-226ENST00000636881 URB2Q14146 1524 aaKnown RBP11.08□□□□□ -0.64
CHD2-226ENST00000636881 ADGBQ8N7X0 1667 aa11.07□□□□□ -0.64
CHD2-226ENST00000636881 ANKRD30AQ9BXX3 1397 aa11.07□□□□□ -0.64
CHD2-226ENST00000636881 CAMSAP2Q08AD1 1489 aa11.06□□□□□ -0.64
CHD2-226ENST00000636881 PLEKHH2Q8IVE3 1493 aa11.06□□□□□ -0.64
CHD2-226ENST00000636881 NUP155O75694 1391 aa11.06□□□□□ -0.64
CHD2-226ENST00000636881 ARHGEF12Q9NZN5 1544 aa11.06□□□□□ -0.64
CHD2-226ENST00000636881 BLMP54132 1417 aaPredicted RBP11.06□□□□□ -0.64
CHD2-226ENST00000636881 ANKRD50Q9ULJ7 1429 aa11.04□□□□□ -0.64
CHD2-226ENST00000636881 ZMYM4Q5VZL5 1548 aa11.04□□□□□ -0.64
CHD2-226ENST00000636881 KIAA0586Q9BVV6 1533 aa11.03□□□□□ -0.64
CHD2-226ENST00000636881 BECN1Q14457 450 aa11.03□□□□□ -0.64
CHD2-226ENST00000636881 L1TD1Q5T7N2 865 aaKnown RBP11.03□□□□□ -0.64
CHD2-226ENST00000636881 INSRP06213 1382 aa11.03□□□□□ -0.64
CHD2-226ENST00000636881 PER1O15534 1290 aaPredicted RBP11.02□□□□□ -0.64
CHD2-226ENST00000636881 WDR43Q15061 677 aaKnown RBP eCLIP11.02□□□□□ -0.641e-6■■□□□ 11.8
CHD2-226ENST00000636881 POGKQ9P215 609 aa11.02□□□□□ -0.65
CHD2-226ENST00000636881 ADGRL2O95490 1459 aa11.01□□□□□ -0.65
CHD2-226ENST00000636881 PANK3Q9H999 370 aa11.01□□□□□ -0.65
CHD2-226ENST00000636881 ITSN2Q9NZM3 1697 aa11.01□□□□□ -0.65
CHD2-226ENST00000636881 GLIPR1L2Q4G1C9 344 aa11.01□□□□□ -0.65
CHD2-226ENST00000636881 ADAMTS8Q9UP79 889 aa11.01□□□□□ -0.65
CHD2-226ENST00000636881 GOLGA2Q08379 1002 aa11□□□□□ -0.65
CHD2-226ENST00000636881 SLKQ9H2G2 1235 aaPredicted RBP11□□□□□ -0.65
CHD2-226ENST00000636881 DUSP27Q5VZP5 1158 aa11□□□□□ -0.65
CHD2-226ENST00000636881 ARXQ96QS3 562 aa11□□□□□ -0.65
CHD2-226ENST00000636881 PRG4Q92954 1404 aaPredicted RBP10.99□□□□□ -0.65
CHD2-226ENST00000636881 NUP153P49790 1475 aaKnown RBP10.99□□□□□ -0.65
CHD2-226ENST00000636881 TROQ12816 1431 aaPredicted RBP10.99□□□□□ -0.65
CHD2-226ENST00000636881 CROCC2H7BZ55 1655 aa10.99□□□□□ -0.65
CHD2-226ENST00000636881 RGL3Q3MIN7 710 aa10.98□□□□□ -0.65
CHD2-226ENST00000636881 RRAGDQ9NQL2 400 aaPredicted RBP10.98□□□□□ -0.65
CHD2-226ENST00000636881 RAPGEF6Q8TEU7 1601 aa10.98□□□□□ -0.65
CHD2-226ENST00000636881 PBRM1Q86U86 1689 aa10.98□□□□□ -0.65
CHD2-226ENST00000636881 NBPF1Q3BBV0 1214 aa10.97□□□□□ -0.65
CHD2-226ENST00000636881 NAP1L5Q96NT1 182 aaPredicted RBP10.97□□□□□ -0.65
CHD2-226ENST00000636881 GPATCH8Q9UKJ3 1502 aaKnown RBP10.97□□□□□ -0.65
CHD2-226ENST00000636881 PLEKHH1Q9ULM0 1364 aa10.97□□□□□ -0.65
CHD2-226ENST00000636881 TMF1P82094 1093 aa10.97□□□□□ -0.65
CHD2-226ENST00000636881 TSPY4P0CV99 314 aa10.97□□□□□ -0.65
CHD2-226ENST00000636881 TSPY10P0CW01 314 aa10.97□□□□□ -0.65
CHD2-226ENST00000636881 CEP170Q5SW79 1584 aa10.97□□□□□ -0.65
CHD2-226ENST00000636881 ZNF608Q9ULD9 1512 aaPredicted RBP10.97□□□□□ -0.65
CHD2-226ENST00000636881 COL17A1Q9UMD9 1497 aaPredicted RBP10.96□□□□□ -0.65
CHD2-226ENST00000636881 DISP3Q9P2K9 1392 aa10.96□□□□□ -0.65
CHD2-226ENST00000636881 EIF3AQ14152 1382 aaKnown RBP10.96□□□□□ -0.66
CHD2-226ENST00000636881 PRAG1Q86YV5 1406 aa10.95□□□□□ -0.66
CHD2-226ENST00000636881 ADAMTS12P58397 1594 aa10.95□□□□□ -0.66
CHD2-226ENST00000636881 KIAA0556O60303 1618 aa10.95□□□□□ -0.66
CHD2-226ENST00000636881 TRPM1Q7Z4N2 1603 aa10.95□□□□□ -0.66
CHD2-226ENST00000636881 UPF2Q9HAU5 1272 aaKnown RBP10.95□□□□□ -0.66
CHD2-226ENST00000636881 C9orf84Q5VXU9 1444 aa10.95□□□□□ -0.66
CHD2-226ENST00000636881 ERBINQ96RT1 1412 aa10.95□□□□□ -0.66
CHD2-226ENST00000636881 KNSTRNQ9Y448 316 aa10.95□□□□□ -0.66
CHD2-226ENST00000636881 CANXP27824 592 aaKnown RBP10.94□□□□□ -0.66
CHD2-226ENST00000636881 PKNOX2Q96KN3 472 aa10.94□□□□□ -0.66
CHD2-226ENST00000636881 PNNQ9H307 717 aaKnown RBP10.94□□□□□ -0.66
CHD2-226ENST00000636881 MAPK8IP3Q9UPT6 1336 aa10.94□□□□□ -0.66
CHD2-226ENST00000636881 CCDC144AA2RUR9 1427 aa10.94□□□□□ -0.66
CHD2-226ENST00000636881 PDS5BQ9NTI5 1447 aa10.94□□□□□ -0.66
CHD2-226ENST00000636881 GOLGA6L3A6NEY3 463 aa10.94□□□□□ -0.66
CHD2-226ENST00000636881 SLFN5Q08AF3 891 aa10.94□□□□□ -0.66
CHD2-226ENST00000636881 VIRMAQ69YN4 1812 aaKnown RBP10.94□□□□□ -0.66
CHD2-226ENST00000636881 TARBP1Q13395 1621 aaKnown RBP10.93□□□□□ -0.66
CHD2-226ENST00000636881 USP19O94966 1318 aa10.93□□□□□ -0.66
CHD2-226ENST00000636881 KDM5DQ9BY66 1539 aa10.93□□□□□ -0.66
CHD2-226ENST00000636881 PPP2R1AP30153 589 aa10.93□□□□□ -0.66
CHD2-226ENST00000636881 SEC24BO95487 1268 aa10.92□□□□□ -0.66
CHD2-226ENST00000636881 IGHDP01880 384 aa10.92□□□□□ -0.66
CHD2-226ENST00000636881 CCDC146Q8IYE0 955 aa10.92□□□□□ -0.66
CHD2-226ENST00000636881 TESK2Q96S53 571 aa10.92□□□□□ -0.66
CHD2-226ENST00000636881 BCAR3O75815 825 aa10.92□□□□□ -0.66
CHD2-226ENST00000636881 DISP1Q96F81 1524 aa10.91□□□□□ -0.66
CHD2-226ENST00000636881 ZNF521Q96K83 1311 aa10.91□□□□□ -0.66
CHD2-226ENST00000636881 CGNL1Q0VF96 1302 aa10.91□□□□□ -0.66
CHD2-226ENST00000636881 HSP90AA1P07900 732 aaKnown RBP10.91□□□□□ -0.66
CHD2-226ENST00000636881 GZF1Q9H116 711 aaPredicted RBP10.91□□□□□ -0.66
CHD2-226ENST00000636881 GPRASP1Q5JY77 1395 aa10.9□□□□□ -0.66
CHD2-226ENST00000636881 NKTRP30414 1462 aaKnown RBP10.9□□□□□ -0.66
CHD2-226ENST00000636881 SHANK2Q9UPX8 1470 aa10.9□□□□□ -0.67
CHD2-226ENST00000636881 VSIG10Q8N0Z9 540 aa10.89□□□□□ -0.67
CHD2-226ENST00000636881 SPRYD3Q8NCJ5 442 aa10.89□□□□□ -0.67
CHD2-226ENST00000636881 EIF4G3O43432 1585 aaKnown RBP10.89□□□□□ -0.67
CHD2-226ENST00000636881 XRCC6P12956 609 aaKnown RBP eCLIP10.89□□□□□ -0.675e-9■□□□□ 8.2
CHD2-226ENST00000636881 HSP90AA2PQ14568 343 aaPredicted RBP10.89□□□□□ -0.67
CHD2-226ENST00000636881 CLUAP1Q96AJ1 413 aa10.89□□□□□ -0.67
CHD2-226ENST00000636881 APAF1O14727 1248 aa10.89□□□□□ -0.67
CHD2-226ENST00000636881 PRDM15P57071 1507 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms