RNA–Protein interactions for RNA: ENST00000630539.1

CLPTM1L-216, Transcript of CLPTM1 like, humanhuman

TSL 5 BASIC

Gene CLPTM1L, Length 2,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-216ENST00000630539 NUP155O75694 1391 aa24.2■■□□□ 1.46
CLPTM1L-216ENST00000630539 DEPDC5O75140 1603 aa24.19■■□□□ 1.46
CLPTM1L-216ENST00000630539 REREQ9P2R6 1566 aa24.19■■□□□ 1.46
CLPTM1L-216ENST00000630539 CCER1Q8TC90 406 aaPredicted RBP24.18■■□□□ 1.46
CLPTM1L-216ENST00000630539 MROH1Q8NDA8 1641 aa24.17■■□□□ 1.46
CLPTM1L-216ENST00000630539 GGT6Q6P531 493 aa24.17■■□□□ 1.46
CLPTM1L-216ENST00000630539 PZPP20742 1482 aa24.16■■□□□ 1.46
CLPTM1L-216ENST00000630539 BCORL1Q5H9F3 1711 aa24.16■■□□□ 1.46
CLPTM1L-216ENST00000630539 RNF17Q9BXT8 1623 aaKnown RBP24.15■■□□□ 1.46
CLPTM1L-216ENST00000630539 PRDM15P57071 1507 aaPredicted RBP24.14■■□□□ 1.46
CLPTM1L-216ENST00000630539 KDM5DQ9BY66 1539 aa24.14■■□□□ 1.45
CLPTM1L-216ENST00000630539 FAM135AQ9P2D6 1515 aa24.14■■□□□ 1.45
CLPTM1L-216ENST00000630539 MPHOSPH9Q99550 1183 aa24.13■■□□□ 1.45
CLPTM1L-216ENST00000630539 SLC4A1APQ9BWU0 796 aaKnown RBP24.13■■□□□ 1.45
CLPTM1L-216ENST00000630539 IQGAP3Q86VI3 1631 aa24.11■■□□□ 1.45
CLPTM1L-216ENST00000630539 AGLP35573 1532 aa24.11■■□□□ 1.45
CLPTM1L-216ENST00000630539 FOXD1Q16676 465 aa24.1■■□□□ 1.45
CLPTM1L-216ENST00000630539 ARID4BQ4LE39 1312 aaPredicted RBP24.1■■□□□ 1.45
CLPTM1L-216ENST00000630539 MLECQ14165 292 aa24.1■■□□□ 1.45
CLPTM1L-216ENST00000630539 ACIN1Q9UKV3 1341 aaKnown RBP24.08■■□□□ 1.44
CLPTM1L-216ENST00000630539 VWDEQ8N2E2 1590 aa24.07■■□□□ 1.44
CLPTM1L-216ENST00000630539 CEP152O94986 1710 aa24.06■■□□□ 1.44
CLPTM1L-216ENST00000630539 KANK1Q14678 1352 aa24.06■■□□□ 1.44
CLPTM1L-216ENST00000630539 PKD2Q13563 968 aa24.05■■□□□ 1.44
CLPTM1L-216ENST00000630539 WASHC2CQ9Y4E1 1318 aa24.02■■□□□ 1.44
CLPTM1L-216ENST00000630539 ABCC3O15438 1527 aa24.01■■□□□ 1.43
CLPTM1L-216ENST00000630539 TET3O43151 1660 aa24■■□□□ 1.43
CLPTM1L-216ENST00000630539 E9PCH4 1651 aa23.98■■□□□ 1.43
CLPTM1L-216ENST00000630539 ZC3H13Q5T200 1668 aaKnown RBP23.96■■□□□ 1.43
CLPTM1L-216ENST00000630539 EFCAB6Q5THR3 1501 aa23.96■■□□□ 1.43
CLPTM1L-216ENST00000630539 LMTK2Q8IWU2 1503 aa23.96■■□□□ 1.43
CLPTM1L-216ENST00000630539 CLTCQ00610 1675 aaKnown RBP23.96■■□□□ 1.43
CLPTM1L-216ENST00000630539 CAMSAP1Q5T5Y3 1602 aa23.95■■□□□ 1.43
CLPTM1L-216ENST00000630539 SIN3AQ96ST3 1273 aa23.93■■□□□ 1.42
CLPTM1L-216ENST00000630539 NPATQ14207 1427 aa23.91■■□□□ 1.42
CLPTM1L-216ENST00000630539 ANKRD30BQ9BXX2 1392 aa23.91■■□□□ 1.42
CLPTM1L-216ENST00000630539 CLSPNQ9HAW4 1339 aa23.9■■□□□ 1.42
CLPTM1L-216ENST00000630539 CFAP65Q6ZU64 1925 aaKnown RBP23.89■■□□□ 1.42
CLPTM1L-216ENST00000630539 NEUROD1Q13562 356 aa23.88■■□□□ 1.41
CLPTM1L-216ENST00000630539 ESF1Q9H501 851 aaKnown RBP23.88■■□□□ 1.41
CLPTM1L-216ENST00000630539 PPP6R1Q9UPN7 881 aa23.88■■□□□ 1.41
CLPTM1L-216ENST00000630539 PLA2R1Q13018 1463 aa23.87■■□□□ 1.41
CLPTM1L-216ENST00000630539 FER1L4A9Z1Z3 1794 aa23.87■■□□□ 1.41
CLPTM1L-216ENST00000630539 SPHKAPQ2M3C7 1700 aa23.86■■□□□ 1.41
CLPTM1L-216ENST00000630539 RPRD2Q5VT52 1461 aaKnown RBP23.84■■□□□ 1.41
CLPTM1L-216ENST00000630539 MADDQ8WXG6 1647 aa23.84■■□□□ 1.41
CLPTM1L-216ENST00000630539 ARHGAP31Q2M1Z3 1444 aa23.82■■□□□ 1.4
CLPTM1L-216ENST00000630539 ZMYM3Q14202 1370 aa23.81■■□□□ 1.4
CLPTM1L-216ENST00000630539 UGGT1Q9NYU2 1555 aa23.81■■□□□ 1.4
CLPTM1L-216ENST00000630539 FBXO31Q5XUX0 539 aaPredicted RBP23.81■■□□□ 1.4
CLPTM1L-216ENST00000630539 PTPRTO14522 1441 aa23.8■■□□□ 1.4
CLPTM1L-216ENST00000630539 TRPM2O94759 1503 aa23.8■■□□□ 1.4
CLPTM1L-216ENST00000630539 ADAMTSL3P82987 1691 aa23.79■■□□□ 1.4
CLPTM1L-216ENST00000630539 PREX1Q8TCU6 1659 aa23.79■■□□□ 1.4
CLPTM1L-216ENST00000630539 CCDC144AA2RUR9 1427 aa23.79■■□□□ 1.4
CLPTM1L-216ENST00000630539 CNTLNQ9NXG0 1405 aa23.79■■□□□ 1.4
CLPTM1L-216ENST00000630539 PLPPR3Q6T4P5 718 aa23.79■■□□□ 1.4
CLPTM1L-216ENST00000630539 MROH2AA6NES4 1674 aa23.78■■□□□ 1.4
CLPTM1L-216ENST00000630539 RIMS1Q86UR5 1692 aaKnown RBP23.78■■□□□ 1.4
CLPTM1L-216ENST00000630539 CEBPAP49715 358 aaPredicted RBP23.77■■□□□ 1.4
CLPTM1L-216ENST00000630539 CLTCL1P53675 1640 aa23.76■■□□□ 1.39
CLPTM1L-216ENST00000630539 SYNMO15061 1565 aa23.76■■□□□ 1.39
CLPTM1L-216ENST00000630539 C3P01024 1663 aa23.75■■□□□ 1.39
CLPTM1L-216ENST00000630539 NOS1P29475 1434 aa23.75■■□□□ 1.39
CLPTM1L-216ENST00000630539 ERVK-7P63135 1459 aa23.75■■□□□ 1.39
CLPTM1L-216ENST00000630539 SPATA31D1Q6ZQQ2 1576 aa23.71■■□□□ 1.39
CLPTM1L-216ENST00000630539 TONSLQ96HA7 1378 aa23.69■■□□□ 1.38
CLPTM1L-216ENST00000630539 PIK3C2BO00750 1634 aa23.67■■□□□ 1.38
CLPTM1L-216ENST00000630539 IDI1Q13907 227 aa23.65■■□□□ 1.38
CLPTM1L-216ENST00000630539 RGL3Q3MIN7 710 aa23.65■■□□□ 1.38
CLPTM1L-216ENST00000630539 KIF1BO60333 1816 aa23.63■■□□□ 1.37
CLPTM1L-216ENST00000630539 L3MBTL2Q969R5 705 aa23.63■■□□□ 1.37
CLPTM1L-216ENST00000630539 SPATA31E1Q6ZUB1 1445 aa23.62■■□□□ 1.37
CLPTM1L-216ENST00000630539 CHGAP10645 457 aaKnown RBP23.62■■□□□ 1.37
CLPTM1L-216ENST00000630539 TNRQ92752 1358 aa23.62■■□□□ 1.37
CLPTM1L-216ENST00000630539 PTPRMP28827 1452 aa23.62■■□□□ 1.37
CLPTM1L-216ENST00000630539 SLC52A1Q9NWF4 448 aa23.6■■□□□ 1.37
CLPTM1L-216ENST00000630539 KDM4FA0A1W2PPD8 638 aa23.6■■□□□ 1.37
CLPTM1L-216ENST00000630539 ADGRB3O60242 1522 aa23.58■■□□□ 1.37
CLPTM1L-216ENST00000630539 MYO5BQ9ULV0 1848 aa23.57■■□□□ 1.36
CLPTM1L-216ENST00000630539 TIMELESSQ9UNS1 1208 aa23.56■■□□□ 1.36
CLPTM1L-216ENST00000630539 TMEM131LA2VDJ0 1609 aa23.55■■□□□ 1.36
CLPTM1L-216ENST00000630539 DCAF11Q8TEB1 546 aa23.55■■□□□ 1.36
CLPTM1L-216ENST00000630539 ZNF326Q5BKZ1 582 aaKnown RBP23.54■■□□□ 1.36
CLPTM1L-216ENST00000630539 KDM2AQ9Y2K7 1162 aa23.54■■□□□ 1.36
CLPTM1L-216ENST00000630539 MYO3AQ8NEV4 1616 aa23.54■■□□□ 1.36
CLPTM1L-216ENST00000630539 STAG3Q9UJ98 1225 aa23.52■■□□□ 1.36
CLPTM1L-216ENST00000630539 NEURL4Q96JN8 1562 aa23.52■■□□□ 1.36
CLPTM1L-216ENST00000630539 PPP1R15AO75807 674 aaPredicted RBP23.51■■□□□ 1.35
CLPTM1L-216ENST00000630539 NLRP1Q9C000 1473 aa23.5■■□□□ 1.35
CLPTM1L-216ENST00000630539 A2ML1A8K2U0 1454 aa23.48■■□□□ 1.35
CLPTM1L-216ENST00000630539 UBR1Q8IWV7 1749 aa23.48■■□□□ 1.35
CLPTM1L-216ENST00000630539 NUTM2DQ5VT03 806 aaPredicted RBP23.47■■□□□ 1.35
CLPTM1L-216ENST00000630539 IFT172Q9UG01 1749 aa23.47■■□□□ 1.35
CLPTM1L-216ENST00000630539 PPLO60437 1756 aa23.45■■□□□ 1.34
CLPTM1L-216ENST00000630539 NBPF8Q3BBV2 869 aa23.45■■□□□ 1.34
CLPTM1L-216ENST00000630539 NEXMIFQ5QGS0 1516 aa23.45■■□□□ 1.34
CLPTM1L-216ENST00000630539 CEP170BQ9Y4F5 1589 aaPredicted RBP23.45■■□□□ 1.34
CLPTM1L-216ENST00000630539 KDM5AP29375 1690 aaKnown RBP23.42■■□□□ 1.34
CLPTM1L-216ENST00000630539 SETD1BQ9UPS6 1966 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms