RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 DEPDC5O75140 1603 aa28.22■■■□□ 2.11
MECP2-216ENST00000627864 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.22■■■□□ 2.11
MECP2-216ENST00000627864 MADDQ8WXG6 1647 aa28.21■■■□□ 2.11
MECP2-216ENST00000627864 MROH1Q8NDA8 1641 aa28.21■■■□□ 2.11
MECP2-216ENST00000627864 SETD5Q9C0A6 1442 aa28.2■■■□□ 2.11
MECP2-216ENST00000627864 RIMS1Q86UR5 1692 aaKnown RBP28.19■■■□□ 2.1
MECP2-216ENST00000627864 ESF1Q9H501 851 aaKnown RBP28.19■■■□□ 2.1
MECP2-216ENST00000627864 CLTCQ00610 1675 aaKnown RBP28.19■■■□□ 2.1
MECP2-216ENST00000627864 CEP152O94986 1710 aa28.18■■■□□ 2.1
MECP2-216ENST00000627864 UNC13BO14795 1591 aa28.17■■■□□ 2.1
MECP2-216ENST00000627864 KDM4FA0A1W2PPD8 638 aa28.17■■■□□ 2.1
MECP2-216ENST00000627864 PPP6R1Q9UPN7 881 aa28.16■■■□□ 2.1
MECP2-216ENST00000627864 PRDM15P57071 1507 aaPredicted RBP28.15■■■□□ 2.1
MECP2-216ENST00000627864 KANK1Q14678 1352 aa28.14■■■□□ 2.1
MECP2-216ENST00000627864 WASHC2CQ9Y4E1 1318 aa28.14■■■□□ 2.09
MECP2-216ENST00000627864 ZC3H13Q5T200 1668 aaKnown RBP28.12■■■□□ 2.09
MECP2-216ENST00000627864 KDM5DQ9BY66 1539 aa28.11■■■□□ 2.09
MECP2-216ENST00000627864 TRIM52Q96A61 297 aa28.1■■■□□ 2.09
MECP2-216ENST00000627864 CFAP65Q6ZU64 1925 aaKnown RBP28.1■■■□□ 2.09
MECP2-216ENST00000627864 RAB3GAP2Q9H2M9 1393 aa28.1■■■□□ 2.09
MECP2-216ENST00000627864 MROH2AA6NES4 1674 aa28.1■■■□□ 2.09
MECP2-216ENST00000627864 FAM135AQ9P2D6 1515 aa28.09■■■□□ 2.09
MECP2-216ENST00000627864 CNTLNQ9NXG0 1405 aa28.09■■■□□ 2.09
MECP2-216ENST00000627864 ABCC3O15438 1527 aa28.08■■■□□ 2.09
MECP2-216ENST00000627864 VWDEQ8N2E2 1590 aa28.08■■■□□ 2.09
MECP2-216ENST00000627864 NUP155O75694 1391 aa28.08■■■□□ 2.09
MECP2-216ENST00000627864 PCGF6Q9BYE7 350 aa28.07■■■□□ 2.08
MECP2-216ENST00000627864 IQGAP3Q86VI3 1631 aa28.07■■■□□ 2.08
MECP2-216ENST00000627864 CAMSAP1Q5T5Y3 1602 aa28.06■■■□□ 2.08
MECP2-216ENST00000627864 C3P01024 1663 aa28.05■■■□□ 2.08
MECP2-216ENST00000627864 PLPPR3Q6T4P5 718 aa28.05■■■□□ 2.08
MECP2-216ENST00000627864 PTPRMP28827 1452 aa28.02■■■□□ 2.08
MECP2-216ENST00000627864 ZMYM3Q14202 1370 aa28.02■■■□□ 2.08
MECP2-216ENST00000627864 TET3O43151 1660 aa28.01■■■□□ 2.07
MECP2-216ENST00000627864 CEBPAP49715 358 aaPredicted RBP28■■■□□ 2.07
MECP2-216ENST00000627864 LMTK2Q8IWU2 1503 aa28■■■□□ 2.07
MECP2-216ENST00000627864 ACIN1Q9UKV3 1341 aaKnown RBP27.99■■■□□ 2.07
MECP2-216ENST00000627864 HRCP23327 699 aa27.99■■■□□ 2.07
MECP2-216ENST00000627864 EFCAB6Q5THR3 1501 aa27.94■■■□□ 2.06
MECP2-216ENST00000627864 PZPP20742 1482 aa27.94■■■□□ 2.06
MECP2-216ENST00000627864 E9PCH4 1651 aa27.94■■■□□ 2.06
MECP2-216ENST00000627864 SLC4A1APQ9BWU0 796 aaKnown RBP27.92■■■□□ 2.06
MECP2-216ENST00000627864 SETD1BQ9UPS6 1966 aaKnown RBP27.91■■■□□ 2.06
MECP2-216ENST00000627864 ARHGAP31Q2M1Z3 1444 aa27.91■■■□□ 2.06
MECP2-216ENST00000627864 FBXO31Q5XUX0 539 aaPredicted RBP27.9■■■□□ 2.06
MECP2-216ENST00000627864 PREX1Q8TCU6 1659 aa27.9■■■□□ 2.06
MECP2-216ENST00000627864 NPATQ14207 1427 aa27.89■■■□□ 2.06
MECP2-216ENST00000627864 MPHOSPH9Q99550 1183 aa27.88■■■□□ 2.05
MECP2-216ENST00000627864 PKD2Q13563 968 aa27.86■■■□□ 2.05
MECP2-216ENST00000627864 RPRD2Q5VT52 1461 aaKnown RBP27.84■■■□□ 2.05
MECP2-216ENST00000627864 ERVK-7P63135 1459 aa27.83■■■□□ 2.04
MECP2-216ENST00000627864 SPATA31D1Q6ZQQ2 1576 aa27.82■■■□□ 2.04
MECP2-216ENST00000627864 SPHKAPQ2M3C7 1700 aa27.81■■■□□ 2.04
MECP2-216ENST00000627864 AEBP2Q6ZN18 517 aaPredicted RBP27.8■■■□□ 2.04
MECP2-216ENST00000627864 TNRQ92752 1358 aa27.78■■■□□ 2.04
MECP2-216ENST00000627864 FOXD1Q16676 465 aa27.78■■■□□ 2.04
MECP2-216ENST00000627864 NOS1P29475 1434 aa27.75■■■□□ 2.03
MECP2-216ENST00000627864 SYNMO15061 1565 aa27.75■■■□□ 2.03
MECP2-216ENST00000627864 MYO3AQ8NEV4 1616 aa27.74■■■□□ 2.03
MECP2-216ENST00000627864 PTPRTO14522 1441 aa27.69■■■□□ 2.02
MECP2-216ENST00000627864 UHRF1BP1Q6BDS2 1440 aa27.67■■■□□ 2.02
MECP2-216ENST00000627864 TRPM2O94759 1503 aa27.67■■■□□ 2.02
MECP2-216ENST00000627864 UGGT1Q9NYU2 1555 aa27.66■■■□□ 2.02
MECP2-216ENST00000627864 PLA2R1Q13018 1463 aa27.66■■■□□ 2.02
MECP2-216ENST00000627864 PIK3C2BO00750 1634 aa27.66■■■□□ 2.02
MECP2-216ENST00000627864 ZNF142P52746 1687 aaPredicted RBP27.65■■■□□ 2.02
MECP2-216ENST00000627864 NLRP1Q9C000 1473 aa27.65■■■□□ 2.02
MECP2-216ENST00000627864 DHX57Q6P158 1386 aaKnown RBP27.65■■■□□ 2.02
MECP2-216ENST00000627864 IDI1Q13907 227 aa27.65■■■□□ 2.02
MECP2-216ENST00000627864 SLC52A1Q9NWF4 448 aa27.64■■■□□ 2.02
MECP2-216ENST00000627864 MYO5BQ9ULV0 1848 aa27.64■■■□□ 2.01
MECP2-216ENST00000627864 CEP170BQ9Y4F5 1589 aaPredicted RBP27.64■■■□□ 2.01
MECP2-216ENST00000627864 CLTCL1P53675 1640 aa27.63■■■□□ 2.01
MECP2-216ENST00000627864 KIF1BO60333 1816 aa27.63■■■□□ 2.01
MECP2-216ENST00000627864 A2ML1A8K2U0 1454 aa27.63■■■□□ 2.01
MECP2-216ENST00000627864 UBR1Q8IWV7 1749 aa27.61■■■□□ 2.01
MECP2-216ENST00000627864 STAG3Q9UJ98 1225 aa27.59■■■□□ 2.01
MECP2-216ENST00000627864 ANKRD30BQ9BXX2 1392 aa27.59■■■□□ 2.01
MECP2-216ENST00000627864 LMTK3Q96Q04 1460 aa27.58■■■□□ 2.01
MECP2-216ENST00000627864 CHGAP10645 457 aaKnown RBP27.58■■■□□ 2.01
MECP2-216ENST00000627864 CCDC144AA2RUR9 1427 aa27.57■■■□□ 2
MECP2-216ENST00000627864 TMEM131LA2VDJ0 1609 aa27.55■■■□□ 2
MECP2-216ENST00000627864 KDM5AP29375 1690 aaKnown RBP27.55■■■□□ 2
MECP2-216ENST00000627864 ADGRB3O60242 1522 aa27.54■■■□□ 2
MECP2-216ENST00000627864 HSPA2P54652 639 aa27.52■■■□□ 2
MECP2-216ENST00000627864 THEMISQ8N1K5 641 aaPredicted RBP27.52■■■□□ 2
MECP2-216ENST00000627864 ZNF326Q5BKZ1 582 aaKnown RBP27.44■■□□□ 1.98
MECP2-216ENST00000627864 CCER1Q8TC90 406 aaPredicted RBP27.43■■□□□ 1.98
MECP2-216ENST00000627864 SIN3AQ96ST3 1273 aa27.43■■□□□ 1.98
MECP2-216ENST00000627864 RGL3Q3MIN7 710 aa27.41■■□□□ 1.98
MECP2-216ENST00000627864 POLR1AO95602 1720 aaPredicted RBP27.41■■□□□ 1.98
MECP2-216ENST00000627864 TMEM2Q9UHN6 1383 aa27.4■■□□□ 1.98
MECP2-216ENST00000627864 NEUROD1Q13562 356 aa27.39■■□□□ 1.98
MECP2-216ENST00000627864 SLIT1O75093 1534 aa27.39■■□□□ 1.98
MECP2-216ENST00000627864 STRCQ7RTU9 1775 aa27.39■■□□□ 1.98
MECP2-216ENST00000627864 SPATA31E1Q6ZUB1 1445 aa27.39■■□□□ 1.97
MECP2-216ENST00000627864 ARHGAP23Q9P227 1491 aa27.38■■□□□ 1.97
MECP2-216ENST00000627864 RIMS2Q9UQ26 1411 aa27.37■■□□□ 1.97
MECP2-216ENST00000627864 PPLO60437 1756 aa27.37■■□□□ 1.97
MECP2-216ENST00000627864 NEURL4Q96JN8 1562 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms