RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 DENND4BO75064 1496 aaPredicted RBP11□□□□□ -0.65
PTP4A1-206ENST00000627002 ATP7AQ04656 1500 aa10.99□□□□□ -0.65
PTP4A1-206ENST00000627002 MPHOSPH9Q99550 1183 aa10.99□□□□□ -0.65
PTP4A1-206ENST00000627002 INO80Q9ULG1 1556 aaPredicted RBP10.99□□□□□ -0.65
PTP4A1-206ENST00000627002 KDM5DQ9BY66 1539 aa10.98□□□□□ -0.65
PTP4A1-206ENST00000627002 KDM5CP41229 1560 aa10.98□□□□□ -0.65
PTP4A1-206ENST00000627002 SLC4A1APQ9BWU0 796 aaKnown RBP10.97□□□□□ -0.65
PTP4A1-206ENST00000627002 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
PTP4A1-206ENST00000627002 TIMELESSQ9UNS1 1208 aa10.97□□□□□ -0.65
PTP4A1-206ENST00000627002 NUP155O75694 1391 aa10.97□□□□□ -0.65
PTP4A1-206ENST00000627002 MLH3Q9UHC1 1453 aa10.97□□□□□ -0.65
PTP4A1-206ENST00000627002 PZPP20742 1482 aa10.96□□□□□ -0.65
PTP4A1-206ENST00000627002 DHX29Q7Z478 1369 aaKnown RBP10.95□□□□□ -0.66
PTP4A1-206ENST00000627002 UNC13BO14795 1591 aa10.94□□□□□ -0.66
PTP4A1-206ENST00000627002 HECW2Q9P2P5 1572 aa10.94□□□□□ -0.66
PTP4A1-206ENST00000627002 RAPGEF3O95398 923 aa10.93□□□□□ -0.66
PTP4A1-206ENST00000627002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTP4A1-206ENST00000627002 TSPOAP1O95153 1857 aa10.93□□□□□ -0.66
PTP4A1-206ENST00000627002 MAGI2Q86UL8 1455 aa10.93□□□□□ -0.66
PTP4A1-206ENST00000627002 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
PTP4A1-206ENST00000627002 NEUROD1Q13562 356 aa10.92□□□□□ -0.66
PTP4A1-206ENST00000627002 SIN3AQ96ST3 1273 aa10.92□□□□□ -0.66
PTP4A1-206ENST00000627002 A2MP01023 1474 aa10.92□□□□□ -0.66
PTP4A1-206ENST00000627002 ANKRD30BQ9BXX2 1392 aa10.91□□□□□ -0.66
PTP4A1-206ENST00000627002 KIDINS220Q9ULH0 1771 aa10.91□□□□□ -0.66
PTP4A1-206ENST00000627002 FAM135AQ9P2D6 1515 aa10.91□□□□□ -0.66
PTP4A1-206ENST00000627002 PKD2Q13563 968 aa10.91□□□□□ -0.66
PTP4A1-206ENST00000627002 PPRC1Q5VV67 1664 aaKnown RBP10.91□□□□□ -0.66
PTP4A1-206ENST00000627002 EIF2AK4Q9P2K8 1649 aaKnown RBP10.91□□□□□ -0.66
PTP4A1-206ENST00000627002 ZMYM4Q5VZL5 1548 aa10.9□□□□□ -0.66
PTP4A1-206ENST00000627002 KANK1Q14678 1352 aa10.9□□□□□ -0.67
PTP4A1-206ENST00000627002 TONSLQ96HA7 1378 aa10.9□□□□□ -0.67
PTP4A1-206ENST00000627002 RICTORQ6R327 1708 aa10.89□□□□□ -0.67
PTP4A1-206ENST00000627002 IQGAP3Q86VI3 1631 aa10.89□□□□□ -0.67
PTP4A1-206ENST00000627002 KIF3BO15066 747 aa10.88□□□□□ -0.67
PTP4A1-206ENST00000627002 FRMPD1Q5SYB0 1578 aa10.88□□□□□ -0.67
PTP4A1-206ENST00000627002 DEPDC5O75140 1603 aa10.87□□□□□ -0.67
PTP4A1-206ENST00000627002 RPRD2Q5VT52 1461 aaKnown RBP10.87□□□□□ -0.67
PTP4A1-206ENST00000627002 DIP2CQ9Y2E4 1556 aa10.86□□□□□ -0.67
PTP4A1-206ENST00000627002 PRDM15P57071 1507 aaPredicted RBP10.86□□□□□ -0.67
PTP4A1-206ENST00000627002 SLC4A2P04920 1241 aa10.86□□□□□ -0.67
PTP4A1-206ENST00000627002 U3KPZ7 1027 aaPredicted RBP10.86□□□□□ -0.67
PTP4A1-206ENST00000627002 ABCA6Q8N139 1617 aa10.86□□□□□ -0.67
PTP4A1-206ENST00000627002 COL17A1Q9UMD9 1497 aaPredicted RBP10.85□□□□□ -0.67
PTP4A1-206ENST00000627002 VWDEQ8N2E2 1590 aa10.85□□□□□ -0.67
PTP4A1-206ENST00000627002 YEATS2Q9ULM3 1422 aa10.84□□□□□ -0.67
PTP4A1-206ENST00000627002 RNF17Q9BXT8 1623 aaKnown RBP10.84□□□□□ -0.67
PTP4A1-206ENST00000627002 PPP1R15AO75807 674 aaPredicted RBP10.84□□□□□ -0.67
PTP4A1-206ENST00000627002 ATP10AO60312 1499 aa10.84□□□□□ -0.67
PTP4A1-206ENST00000627002 BCORL1Q5H9F3 1711 aa10.84□□□□□ -0.67
PTP4A1-206ENST00000627002 LMTK2Q8IWU2 1503 aa10.83□□□□□ -0.68
PTP4A1-206ENST00000627002 REREQ9P2R6 1566 aa10.82□□□□□ -0.68
PTP4A1-206ENST00000627002 FBXO41Q8TF61 875 aa10.82□□□□□ -0.68
PTP4A1-206ENST00000627002 MROH1Q8NDA8 1641 aa10.82□□□□□ -0.68
PTP4A1-206ENST00000627002 TET3O43151 1660 aa10.81□□□□□ -0.68
PTP4A1-206ENST00000627002 CCDC144AA2RUR9 1427 aa10.81□□□□□ -0.68
PTP4A1-206ENST00000627002 GGT6Q6P531 493 aa10.8□□□□□ -0.68
PTP4A1-206ENST00000627002 AGLP35573 1532 aa10.79□□□□□ -0.68
PTP4A1-206ENST00000627002 ARHGEF40Q8TER5 1519 aa10.79□□□□□ -0.68
PTP4A1-206ENST00000627002 L3MBTL2Q969R5 705 aa10.79□□□□□ -0.68
PTP4A1-206ENST00000627002 PLA2R1Q13018 1463 aa10.79□□□□□ -0.68
PTP4A1-206ENST00000627002 PTPRTO14522 1441 aa10.78□□□□□ -0.68
PTP4A1-206ENST00000627002 ZNF316A6NFI3 1004 aaPredicted RBP10.78□□□□□ -0.68
PTP4A1-206ENST00000627002 WASHC2CQ9Y4E1 1318 aa10.78□□□□□ -0.68
PTP4A1-206ENST00000627002 EFCAB6Q5THR3 1501 aa10.78□□□□□ -0.68
PTP4A1-206ENST00000627002 ABCC3O15438 1527 aa10.77□□□□□ -0.69
PTP4A1-206ENST00000627002 TRPM2O94759 1503 aa10.77□□□□□ -0.69
PTP4A1-206ENST00000627002 E9PCH4 1651 aa10.76□□□□□ -0.69
PTP4A1-206ENST00000627002 ZC3H13Q5T200 1668 aaKnown RBP10.75□□□□□ -0.69
PTP4A1-206ENST00000627002 ARHGAP31Q2M1Z3 1444 aa10.75□□□□□ -0.69
PTP4A1-206ENST00000627002 NPATQ14207 1427 aa10.73□□□□□ -0.69
PTP4A1-206ENST00000627002 CNTLNQ9NXG0 1405 aa10.73□□□□□ -0.69
PTP4A1-206ENST00000627002 UHRF1BP1Q6BDS2 1440 aa10.72□□□□□ -0.69
PTP4A1-206ENST00000627002 CEP152O94986 1710 aa10.72□□□□□ -0.69
PTP4A1-206ENST00000627002 SPHKAPQ2M3C7 1700 aa10.72□□□□□ -0.69
PTP4A1-206ENST00000627002 CAMSAP1Q5T5Y3 1602 aa10.71□□□□□ -0.69
PTP4A1-206ENST00000627002 STAC3Q96MF2 364 aa10.71□□□□□ -0.69
PTP4A1-206ENST00000627002 NEURL4Q96JN8 1562 aa10.7□□□□□ -0.7
PTP4A1-206ENST00000627002 SPATA31E1Q6ZUB1 1445 aa10.7□□□□□ -0.7
PTP4A1-206ENST00000627002 DCAF11Q8TEB1 546 aa10.7□□□□□ -0.7
PTP4A1-206ENST00000627002 NOS1P29475 1434 aa10.69□□□□□ -0.7
PTP4A1-206ENST00000627002 ARID4BQ4LE39 1312 aaPredicted RBP10.69□□□□□ -0.7
PTP4A1-206ENST00000627002 ESF1Q9H501 851 aaKnown RBP10.69□□□□□ -0.7
PTP4A1-206ENST00000627002 CLTCL1P53675 1640 aa10.69□□□□□ -0.7
PTP4A1-206ENST00000627002 NBPF8Q3BBV2 869 aa10.68□□□□□ -0.7
PTP4A1-206ENST00000627002 RGL3Q3MIN7 710 aa10.68□□□□□ -0.7
PTP4A1-206ENST00000627002 SLC52A1Q9NWF4 448 aa10.67□□□□□ -0.7
PTP4A1-206ENST00000627002 KDM2AQ9Y2K7 1162 aa10.67□□□□□ -0.7
PTP4A1-206ENST00000627002 EIF4G2P78344 907 aaKnown RBP eCLIP10.66□□□□□ -0.7
PTP4A1-206ENST00000627002 MLECQ14165 292 aa10.66□□□□□ -0.7
PTP4A1-206ENST00000627002 ZNF326Q5BKZ1 582 aaKnown RBP10.66□□□□□ -0.7
PTP4A1-206ENST00000627002 PTPRMP28827 1452 aa10.66□□□□□ -0.7
PTP4A1-206ENST00000627002 RALGAPBQ86X10 1494 aa10.66□□□□□ -0.7
PTP4A1-206ENST00000627002 PRAG1Q86YV5 1406 aa10.66□□□□□ -0.7
PTP4A1-206ENST00000627002 SIGLEC1Q9BZZ2 1709 aa10.65□□□□□ -0.7
PTP4A1-206ENST00000627002 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.7
PTP4A1-206ENST00000627002 ADGRB3O60242 1522 aa10.64□□□□□ -0.71
PTP4A1-206ENST00000627002 ERVK-7P63135 1459 aa10.64□□□□□ -0.71
PTP4A1-206ENST00000627002 DIEXFQ68CQ4 756 aaKnown RBP10.64□□□□□ -0.71
PTP4A1-206ENST00000627002 UGGT1Q9NYU2 1555 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms