RNA–Protein interactions for RNA: ENST00000626839.2

KCNQ2-213, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KCNQ2, Length 9,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-213ENST00000626839 CENPJQ9HC77 1338 aaPredicted RBP21.66■■□□□ 1.06
KCNQ2-213ENST00000626839 GOLGA6L19H0YKK7 550 aa21.66■■□□□ 1.06
KCNQ2-213ENST00000626839 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
KCNQ2-213ENST00000626839 H3BQV1 296 aa21.66■■□□□ 1.06
KCNQ2-213ENST00000626839 IFFO2Q5TF58 517 aa21.66■■□□□ 1.06
KCNQ2-213ENST00000626839 PDE3BQ13370 1112 aa21.65■■□□□ 1.06
KCNQ2-213ENST00000626839 VPS53Q5VIR6 699 aa21.64■■□□□ 1.06
KCNQ2-213ENST00000626839 PKD2Q13563 968 aa21.64■■□□□ 1.06
KCNQ2-213ENST00000626839 CCDC18Q5T9S5 1454 aa21.64■■□□□ 1.06
KCNQ2-213ENST00000626839 MLECQ14165 292 aa21.64■■□□□ 1.05
KCNQ2-213ENST00000626839 SKOR2Q2VWA4 1001 aaPredicted RBP21.63■■□□□ 1.05
KCNQ2-213ENST00000626839 MARCH6O60337 910 aa21.63■■□□□ 1.05
KCNQ2-213ENST00000626839 PES1O00541 588 aaKnown RBP21.63■■□□□ 1.05
KCNQ2-213ENST00000626839 RSPH6AQ9H0K4 717 aa21.62■■□□□ 1.05
KCNQ2-213ENST00000626839 PRDM2Q13029 1718 aa21.62■■□□□ 1.05
KCNQ2-213ENST00000626839 HSP90AA2PQ14568 343 aaPredicted RBP21.61■■□□□ 1.05
KCNQ2-213ENST00000626839 NUP155O75694 1391 aa21.61■■□□□ 1.05
KCNQ2-213ENST00000626839 PDE4CQ08493 712 aa21.61■■□□□ 1.05
KCNQ2-213ENST00000626839 UACAQ9BZF9 1416 aa21.6■■□□□ 1.05
KCNQ2-213ENST00000626839 AKAP17AQ02040 695 aaKnown RBP21.59■■□□□ 1.05
KCNQ2-213ENST00000626839 FRAT2O75474 233 aaPredicted RBP21.59■■□□□ 1.05
KCNQ2-213ENST00000626839 KIF15Q9NS87 1388 aa21.59■■□□□ 1.05
KCNQ2-213ENST00000626839 TCEAL9Q9UHQ7 104 aa21.59■■□□□ 1.05
KCNQ2-213ENST00000626839 IPO7O95373 1038 aaKnown RBP21.58■■□□□ 1.05
KCNQ2-213ENST00000626839 NLRP13Q86W25 1043 aa21.58■■□□□ 1.05
KCNQ2-213ENST00000626839 SLC4A10Q6U841 1118 aa21.57■■□□□ 1.04
KCNQ2-213ENST00000626839 HOOK1Q9UJC3 728 aaKnown RBP21.57■■□□□ 1.04
KCNQ2-213ENST00000626839 ANKRD20A12PQ8NF67 263 aa21.56■■□□□ 1.04
KCNQ2-213ENST00000626839 BECN2A8MW95 431 aa21.56■■□□□ 1.04
KCNQ2-213ENST00000626839 GGT6Q6P531 493 aa21.56■■□□□ 1.04
KCNQ2-213ENST00000626839 TOMM22Q9NS69 142 aa21.56■■□□□ 1.04
KCNQ2-213ENST00000626839 TRHP20396 242 aaPredicted RBP21.56■■□□□ 1.04
KCNQ2-213ENST00000626839 FAM184AQ8NB25 1140 aa21.55■■□□□ 1.04
KCNQ2-213ENST00000626839 EID1Q9Y6B2 187 aa21.55■■□□□ 1.04
KCNQ2-213ENST00000626839 AMOTL1Q8IY63 956 aa21.53■■□□□ 1.04
KCNQ2-213ENST00000626839 RAB3GAP2Q9H2M9 1393 aa21.53■■□□□ 1.04
KCNQ2-213ENST00000626839 GTF2E1P29083 439 aaPredicted RBP21.53■■□□□ 1.04
KCNQ2-213ENST00000626839 TEX35Q5T0J7 233 aa21.52■■□□□ 1.04
KCNQ2-213ENST00000626839 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.52■■□□□ 1.04
KCNQ2-213ENST00000626839 CENPQQ7L2Z9 268 aaPredicted RBP21.52■■□□□ 1.03
KCNQ2-213ENST00000626839 CCAR2Q8N163 923 aaKnown RBP21.51■■□□□ 1.03
KCNQ2-213ENST00000626839 NOL8Q76FK4 1167 aaKnown RBP21.51■■□□□ 1.03
KCNQ2-213ENST00000626839 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
KCNQ2-213ENST00000626839 AMPHP49418 695 aa21.51■■□□□ 1.03
KCNQ2-213ENST00000626839 ROCK1Q13464 1354 aa21.5■■□□□ 1.03
KCNQ2-213ENST00000626839 SYNE3Q6ZMZ3 975 aa21.5■■□□□ 1.03
KCNQ2-213ENST00000626839 REC8O95072 547 aa21.5■■□□□ 1.03
KCNQ2-213ENST00000626839 CPLX2Q6PUV4 134 aaKnown RBP21.5■■□□□ 1.03
KCNQ2-213ENST00000626839 MPHOSPH9Q99550 1183 aa21.49■■□□□ 1.03
KCNQ2-213ENST00000626839 RUFY2Q8WXA3 655 aa21.48■■□□□ 1.03
KCNQ2-213ENST00000626839 NOL10Q9BSC4 688 aaKnown RBP21.47■■□□□ 1.03
KCNQ2-213ENST00000626839 NGDNQ8NEJ9 315 aaKnown RBP21.47■■□□□ 1.03
KCNQ2-213ENST00000626839 TRIM29Q14134 588 aa21.46■■□□□ 1.03
KCNQ2-213ENST00000626839 CGNL1Q0VF96 1302 aa21.46■■□□□ 1.03
KCNQ2-213ENST00000626839 CCDC9Q9Y3X0 531 aaKnown RBP21.46■■□□□ 1.03
KCNQ2-213ENST00000626839 CCDC47Q96A33 483 aaKnown RBP21.45■■□□□ 1.03
KCNQ2-213ENST00000626839 DDX49Q9Y6V7 483 aaKnown RBP21.45■■□□□ 1.02
KCNQ2-213ENST00000626839 DIAPH3Q9NSV4 1193 aa21.45■■□□□ 1.02
KCNQ2-213ENST00000626839 EFCAB2Q5VUJ9 269 aa21.45■■□□□ 1.02
KCNQ2-213ENST00000626839 TRIM34Q9BYJ4 488 aa21.44■■□□□ 1.02
KCNQ2-213ENST00000626839 FAM161AQ3B820 660 aa21.44■■□□□ 1.02
KCNQ2-213ENST00000626839 RSPH4AQ5TD94 716 aa21.44■■□□□ 1.02
KCNQ2-213ENST00000626839 CALRP27797 417 aaKnown RBP21.44■■□□□ 1.02
KCNQ2-213ENST00000626839 CCDC144AA2RUR9 1427 aa21.44■■□□□ 1.02
KCNQ2-213ENST00000626839 ZKSCAN1P17029 563 aaPredicted RBP21.43■■□□□ 1.02
KCNQ2-213ENST00000626839 RRP12Q5JTH9 1297 aaKnown RBP21.43■■□□□ 1.02
KCNQ2-213ENST00000626839 NEXNQ0ZGT2 675 aa21.43■■□□□ 1.02
KCNQ2-213ENST00000626839 FOXD1Q16676 465 aa21.43■■□□□ 1.02
KCNQ2-213ENST00000626839 MCTP1Q6DN14 999 aa21.43■■□□□ 1.02
KCNQ2-213ENST00000626839 FOXD4L1Q9NU39 408 aa21.43■■□□□ 1.02
KCNQ2-213ENST00000626839 MYBBP1AQ9BQG0 1328 aaKnown RBP21.43■■□□□ 1.02
KCNQ2-213ENST00000626839 RILPL2Q969X0 211 aa21.42■■□□□ 1.02
KCNQ2-213ENST00000626839 CLUAP1Q96AJ1 413 aa21.42■■□□□ 1.02
KCNQ2-213ENST00000626839 CDR1P51861 262 aa21.41■■□□□ 1.02
KCNQ2-213ENST00000626839 C1orf141Q5JVX7 400 aa21.4■■□□□ 1.02
KCNQ2-213ENST00000626839 PDS5BQ9NTI5 1447 aa21.4■■□□□ 1.02
KCNQ2-213ENST00000626839 AK7Q96M32 723 aa21.39■■□□□ 1.01
KCNQ2-213ENST00000626839 ZNF771Q7L3S4 317 aaPredicted RBP21.39■■□□□ 1.01
KCNQ2-213ENST00000626839 CCDC146Q8IYE0 955 aa21.39■■□□□ 1.01
KCNQ2-213ENST00000626839 RNF20Q5VTR2 975 aa21.38■■□□□ 1.01
KCNQ2-213ENST00000626839 NOM1Q5C9Z4 860 aaKnown RBP21.38■■□□□ 1.01
KCNQ2-213ENST00000626839 RUFY1Q96T51 708 aa21.38■■□□□ 1.01
KCNQ2-213ENST00000626839 FOXD4L5Q5VV16 416 aaPredicted RBP21.38■■□□□ 1.01
KCNQ2-213ENST00000626839 FOXD4L4Q8WXT5 416 aaPredicted RBP21.38■■□□□ 1.01
KCNQ2-213ENST00000626839 PCMTD1Q96MG8 357 aaPredicted RBP21.38■■□□□ 1.01
KCNQ2-213ENST00000626839 E9PSI1 815 aa21.38■■□□□ 1.01
KCNQ2-213ENST00000626839 ACBD3Q9H3P7 528 aa21.37■■□□□ 1.01
KCNQ2-213ENST00000626839 GSE1Q14687 1217 aa21.37■■□□□ 1.01
KCNQ2-213ENST00000626839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.37■■□□□ 1.01
KCNQ2-213ENST00000626839 ANKRD45Q5TZF3 282 aa21.36■■□□□ 1.01
KCNQ2-213ENST00000626839 SOGA1O94964 1423 aa21.36■■□□□ 1.01
KCNQ2-213ENST00000626839 CPLX1O14810 134 aa21.36■■□□□ 1.01
KCNQ2-213ENST00000626839 CTDP1Q9Y5B0 961 aaPredicted RBP21.36■■□□□ 1.01
KCNQ2-213ENST00000626839 ZKSCAN2Q63HK3 967 aa21.35■■□□□ 1.01
KCNQ2-213ENST00000626839 WASHC2CQ9Y4E1 1318 aa21.35■■□□□ 1.01
KCNQ2-213ENST00000626839 HOMER1Q86YM7 354 aa21.35■■□□□ 1.01
KCNQ2-213ENST00000626839 C9orf78Q9NZ63 289 aaPredicted RBP21.35■■□□□ 1.01
KCNQ2-213ENST00000626839 KRI1Q8N9T8 703 aaKnown RBP21.34■■□□□ 1.01
KCNQ2-213ENST00000626839 WIZO95785 1651 aa21.34■■□□□ 1.01
KCNQ2-213ENST00000626839 TRDNQ13061 729 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms