RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 PDE3BQ13370 1112 aa18.16■□□□□ 0.5
UBE3A-209ENST00000625778 ARID4BQ4LE39 1312 aaPredicted RBP18.16■□□□□ 0.5
UBE3A-209ENST00000625778 PANK3Q9H999 370 aa18.15■□□□□ 0.5
UBE3A-209ENST00000625778 LAMC3Q9Y6N6 1575 aa18.14■□□□□ 0.49
UBE3A-209ENST00000625778 WASHC2CQ9Y4E1 1318 aa18.14■□□□□ 0.49
UBE3A-209ENST00000625778 ABCA5Q8WWZ7 1642 aa18.14■□□□□ 0.49
UBE3A-209ENST00000625778 ANKRD30AQ9BXX3 1397 aa18.12■□□□□ 0.49
UBE3A-209ENST00000625778 SLC24A1O60721 1099 aa18.12■□□□□ 0.49
UBE3A-209ENST00000625778 TSPY4P0CV99 314 aa18.12■□□□□ 0.49
UBE3A-209ENST00000625778 TSPY10P0CW01 314 aa18.12■□□□□ 0.49
UBE3A-209ENST00000625778 ADAMTS8Q9UP79 889 aa18.11■□□□□ 0.49
UBE3A-209ENST00000625778 ANKRD50Q9ULJ7 1429 aa18.11■□□□□ 0.49
UBE3A-209ENST00000625778 WDR43Q15061 677 aaKnown RBP eCLIP18.1■□□□□ 0.491e-6■□□□□ 10.7
UBE3A-209ENST00000625778 HNRNPMP52272 730 aaKnown RBP eCLIP18.1■□□□□ 0.49
UBE3A-209ENST00000625778 CCDC146Q8IYE0 955 aa18.09■□□□□ 0.49
UBE3A-209ENST00000625778 KDM5CP41229 1560 aa18.09■□□□□ 0.49
UBE3A-209ENST00000625778 FAM161AQ3B820 660 aa18.08■□□□□ 0.49
UBE3A-209ENST00000625778 MBD5Q9P267 1494 aa18.08■□□□□ 0.49
UBE3A-209ENST00000625778 CAMSAP2Q08AD1 1489 aa18.08■□□□□ 0.48
UBE3A-209ENST00000625778 IQGAP2Q13576 1575 aa18.08■□□□□ 0.48
UBE3A-209ENST00000625778 WDR62O43379 1518 aa18.07■□□□□ 0.48
UBE3A-209ENST00000625778 SLKQ9H2G2 1235 aaPredicted RBP18.07■□□□□ 0.48
UBE3A-209ENST00000625778 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
UBE3A-209ENST00000625778 PODXL2Q9NZ53 605 aa18.06■□□□□ 0.48
UBE3A-209ENST00000625778 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
UBE3A-209ENST00000625778 RALGAPBQ86X10 1494 aa18.05■□□□□ 0.48
UBE3A-209ENST00000625778 PER1O15534 1290 aaPredicted RBP18.04■□□□□ 0.48
UBE3A-209ENST00000625778 C8orf34Q49A92 452 aa18.04■□□□□ 0.48
UBE3A-209ENST00000625778 PARD3Q8TEW0 1356 aa18.03■□□□□ 0.48
UBE3A-209ENST00000625778 POLR1AO95602 1720 aaPredicted RBP18.03■□□□□ 0.48
UBE3A-209ENST00000625778 KIF14Q15058 1648 aa18.03■□□□□ 0.48
UBE3A-209ENST00000625778 ZMYND15Q9H091 742 aa18.03■□□□□ 0.48
UBE3A-209ENST00000625778 NUP153P49790 1475 aaKnown RBP18.02■□□□□ 0.48
UBE3A-209ENST00000625778 A0A0U1RQG5 324 aaPredicted RBP18.02■□□□□ 0.48
UBE3A-209ENST00000625778 CANXP27824 592 aaKnown RBP18.01■□□□□ 0.47
UBE3A-209ENST00000625778 SPRYD3Q8NCJ5 442 aa18.01■□□□□ 0.47
UBE3A-209ENST00000625778 DISP3Q9P2K9 1392 aa18.01■□□□□ 0.47
UBE3A-209ENST00000625778 KIAA0586Q9BVV6 1533 aa18■□□□□ 0.47
UBE3A-209ENST00000625778 PLEKHD1A6NEE1 506 aa18■□□□□ 0.47
UBE3A-209ENST00000625778 GOLGA6L2Q8N9W4 650 aaPredicted RBP18■□□□□ 0.47
UBE3A-209ENST00000625778 KNSTRNQ9Y448 316 aa18■□□□□ 0.47
UBE3A-209ENST00000625778 GOLGA2Q08379 1002 aa17.99■□□□□ 0.47
UBE3A-209ENST00000625778 BCAR3O75815 825 aa17.99■□□□□ 0.47
UBE3A-209ENST00000625778 POGKQ9P215 609 aa17.98■□□□□ 0.47
UBE3A-209ENST00000625778 KDM2BQ8NHM5 1336 aa17.98■□□□□ 0.47
UBE3A-209ENST00000625778 TMF1P82094 1093 aa17.98■□□□□ 0.47
UBE3A-209ENST00000625778 DUSP27Q5VZP5 1158 aa17.97■□□□□ 0.47
UBE3A-209ENST00000625778 TROQ12816 1431 aaPredicted RBP17.97■□□□□ 0.47
UBE3A-209ENST00000625778 PLB1Q6P1J6 1458 aa17.97■□□□□ 0.47
UBE3A-209ENST00000625778 GPATCH8Q9UKJ3 1502 aaKnown RBP17.97■□□□□ 0.47
UBE3A-209ENST00000625778 PLEKHH1Q9ULM0 1364 aa17.97■□□□□ 0.47
UBE3A-209ENST00000625778 UHRF1BP1Q6BDS2 1440 aa17.96■□□□□ 0.47
UBE3A-209ENST00000625778 NEUROD2Q15784 382 aa17.96■□□□□ 0.47
UBE3A-209ENST00000625778 GLIPR1L2Q4G1C9 344 aa17.95■□□□□ 0.46
UBE3A-209ENST00000625778 CHMP7Q8WUX9 453 aaPredicted RBP17.95■□□□□ 0.46
UBE3A-209ENST00000625778 C9orf84Q5VXU9 1444 aa17.94■□□□□ 0.46
UBE3A-209ENST00000625778 APAF1O14727 1248 aa17.94■□□□□ 0.46
UBE3A-209ENST00000625778 CCDC144AA2RUR9 1427 aa17.94■□□□□ 0.46
UBE3A-209ENST00000625778 GZF1Q9H116 711 aaPredicted RBP17.93■□□□□ 0.46
UBE3A-209ENST00000625778 SPINK5Q9NQ38 1064 aaPredicted RBP17.93■□□□□ 0.46
UBE3A-209ENST00000625778 SEC24BO95487 1268 aa17.93■□□□□ 0.46
UBE3A-209ENST00000625778 PPP2R1AP30153 589 aa17.93■□□□□ 0.46
UBE3A-209ENST00000625778 KIF21AQ7Z4S6 1674 aa17.92■□□□□ 0.46
UBE3A-209ENST00000625778 TESK2Q96S53 571 aa17.92■□□□□ 0.46
UBE3A-209ENST00000625778 COG6Q9Y2V7 657 aa17.91■□□□□ 0.46
UBE3A-209ENST00000625778 IGHDP01880 384 aa17.91■□□□□ 0.46
UBE3A-209ENST00000625778 NAP1L5Q96NT1 182 aaPredicted RBP17.91■□□□□ 0.46
UBE3A-209ENST00000625778 PANK1Q8TE04 598 aa17.9■□□□□ 0.46
UBE3A-209ENST00000625778 DISP1Q96F81 1524 aa17.88■□□□□ 0.45
UBE3A-209ENST00000625778 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
UBE3A-209ENST00000625778 TNNT2P45379 298 aaPredicted RBP17.88■□□□□ 0.45
UBE3A-209ENST00000625778 BLMP54132 1417 aaPredicted RBP17.87■□□□□ 0.45
UBE3A-209ENST00000625778 ERBINQ96RT1 1412 aa17.87■□□□□ 0.45
UBE3A-209ENST00000625778 BCL2L13Q9BXK5 485 aa17.87■□□□□ 0.45
UBE3A-209ENST00000625778 PRAG1Q86YV5 1406 aa17.86■□□□□ 0.45
UBE3A-209ENST00000625778 BECN1Q14457 450 aa17.85■□□□□ 0.45
UBE3A-209ENST00000625778 RAPGEF6Q8TEU7 1601 aa17.85■□□□□ 0.45
UBE3A-209ENST00000625778 SLFN5Q08AF3 891 aa17.85■□□□□ 0.45
UBE3A-209ENST00000625778 RRP7AQ9Y3A4 280 aaKnown RBP17.85■□□□□ 0.45
UBE3A-209ENST00000625778 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
UBE3A-209ENST00000625778 CLUAP1Q96AJ1 413 aa17.84■□□□□ 0.45
UBE3A-209ENST00000625778 RSPH6AQ9H0K4 717 aa17.83■□□□□ 0.44
UBE3A-209ENST00000625778 ARHGEF12Q9NZN5 1544 aa17.83■□□□□ 0.44
UBE3A-209ENST00000625778 KIAA0556O60303 1618 aa17.83■□□□□ 0.44
UBE3A-209ENST00000625778 ADAMTS12P58397 1594 aa17.83■□□□□ 0.44
UBE3A-209ENST00000625778 FAM43AQ8N2R8 423 aa17.82■□□□□ 0.44
UBE3A-209ENST00000625778 JPH4Q96JJ6 628 aa17.82■□□□□ 0.44
UBE3A-209ENST00000625778 ADGRL2O95490 1459 aa17.82■□□□□ 0.44
UBE3A-209ENST00000625778 ZMYM4Q5VZL5 1548 aa17.82■□□□□ 0.44
UBE3A-209ENST00000625778 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
UBE3A-209ENST00000625778 UPF2Q9HAU5 1272 aaKnown RBP17.81■□□□□ 0.44
UBE3A-209ENST00000625778 RRAGDQ9NQL2 400 aaPredicted RBP17.81■□□□□ 0.44
UBE3A-209ENST00000625778 COL17A1Q9UMD9 1497 aaPredicted RBP17.79■□□□□ 0.44
UBE3A-209ENST00000625778 PBRM1Q86U86 1689 aa17.79■□□□□ 0.44
UBE3A-209ENST00000625778 TNNQ9UQP3 1299 aa17.79■□□□□ 0.44
UBE3A-209ENST00000625778 CENPJQ9HC77 1338 aaPredicted RBP17.78■□□□□ 0.44
UBE3A-209ENST00000625778 AMER1Q5JTC6 1135 aaPredicted RBP17.77■□□□□ 0.44
UBE3A-209ENST00000625778 USP19O94966 1318 aa17.77■□□□□ 0.44
UBE3A-209ENST00000625778 ADGBQ8N7X0 1667 aa17.77■□□□□ 0.44
UBE3A-209ENST00000625778 HSP90AA2PQ14568 343 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms