RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 CDK13Q14004 1512 aaKnown RBP19.59■□□□□ 0.73
PMS1-221ENST00000624204 ABCA10Q8WWZ4 1543 aa19.59■□□□□ 0.73
PMS1-221ENST00000624204 ROCK1Q13464 1354 aa19.58■□□□□ 0.73
PMS1-221ENST00000624204 POLA1P09884 1462 aaPredicted RBP19.58■□□□□ 0.73
PMS1-221ENST00000624204 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
PMS1-221ENST00000624204 MBD5Q9P267 1494 aa19.56■□□□□ 0.72
PMS1-221ENST00000624204 THOC2Q8NI27 1593 aaKnown RBP19.56■□□□□ 0.72
PMS1-221ENST00000624204 KIAA1107Q9UPP5 1409 aa19.56■□□□□ 0.72
PMS1-221ENST00000624204 GOLGA6L3A6NEY3 463 aa19.56■□□□□ 0.72
PMS1-221ENST00000624204 PANK2Q9BZ23 570 aa19.56■□□□□ 0.72
PMS1-221ENST00000624204 PARD3Q8TEW0 1356 aa19.56■□□□□ 0.72
PMS1-221ENST00000624204 PZPP20742 1482 aa19.56■□□□□ 0.72
PMS1-221ENST00000624204 ADAMTS8Q9UP79 889 aa19.56■□□□□ 0.72
PMS1-221ENST00000624204 SEC24BO95487 1268 aa19.55■□□□□ 0.72
PMS1-221ENST00000624204 CUL7Q14999 1698 aa19.55■□□□□ 0.72
PMS1-221ENST00000624204 CANXP27824 592 aaKnown RBP19.55■□□□□ 0.72
PMS1-221ENST00000624204 SAMD9Q5K651 1589 aa19.54■□□□□ 0.72
PMS1-221ENST00000624204 XRCC6P12956 609 aaKnown RBP eCLIP19.54■□□□□ 0.72
PMS1-221ENST00000624204 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
PMS1-221ENST00000624204 EPRSP07814 1512 aaKnown RBP19.54■□□□□ 0.72
PMS1-221ENST00000624204 CCDC146Q8IYE0 955 aa19.53■□□□□ 0.72
PMS1-221ENST00000624204 KIF14Q15058 1648 aa19.53■□□□□ 0.72
PMS1-221ENST00000624204 WDR43Q15061 677 aaKnown RBP eCLIP19.52■□□□□ 0.72
PMS1-221ENST00000624204 DUSP27Q5VZP5 1158 aa19.51■□□□□ 0.71
PMS1-221ENST00000624204 PRDM2Q13029 1718 aa19.51■□□□□ 0.71
PMS1-221ENST00000624204 RALGAPBQ86X10 1494 aa19.51■□□□□ 0.71
PMS1-221ENST00000624204 PANK3Q9H999 370 aa19.51■□□□□ 0.71
PMS1-221ENST00000624204 PER1O15534 1290 aaPredicted RBP19.5■□□□□ 0.71
PMS1-221ENST00000624204 USP19O94966 1318 aa19.5■□□□□ 0.71
PMS1-221ENST00000624204 GOLGA2Q08379 1002 aa19.5■□□□□ 0.71
PMS1-221ENST00000624204 NEUROD2Q15784 382 aa19.48■□□□□ 0.71
PMS1-221ENST00000624204 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
PMS1-221ENST00000624204 RRP9O43818 475 aaKnown RBP19.48■□□□□ 0.71
PMS1-221ENST00000624204 IGHDP01880 384 aa19.47■□□□□ 0.71
PMS1-221ENST00000624204 TOPBP1Q92547 1522 aa19.47■□□□□ 0.71
PMS1-221ENST00000624204 CLCN1P35523 988 aa19.47■□□□□ 0.71
PMS1-221ENST00000624204 UPF2Q9HAU5 1272 aaKnown RBP19.47■□□□□ 0.71
PMS1-221ENST00000624204 NUP155O75694 1391 aa19.47■□□□□ 0.71
PMS1-221ENST00000624204 PLEKHH1Q9ULM0 1364 aa19.46■□□□□ 0.71
PMS1-221ENST00000624204 BCAR3O75815 825 aa19.46■□□□□ 0.71
PMS1-221ENST00000624204 BLMP54132 1417 aaPredicted RBP19.46■□□□□ 0.7
PMS1-221ENST00000624204 ZBTB7CA1YPR0 619 aa19.45■□□□□ 0.7
PMS1-221ENST00000624204 NESP48681 1621 aa19.44■□□□□ 0.7
PMS1-221ENST00000624204 NBPF1Q3BBV0 1214 aa19.44■□□□□ 0.7
PMS1-221ENST00000624204 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
PMS1-221ENST00000624204 UHRF1BP1Q6BDS2 1440 aa19.43■□□□□ 0.7
PMS1-221ENST00000624204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.42■□□□□ 0.74e-6■■□□□ 13.1
PMS1-221ENST00000624204 ZMYM4Q5VZL5 1548 aa19.41■□□□□ 0.7
PMS1-221ENST00000624204 TBC1D2Q9BYX2 928 aa19.41■□□□□ 0.7
PMS1-221ENST00000624204 ANTXR1Q9H6X2 564 aa19.41■□□□□ 0.7
PMS1-221ENST00000624204 DNMT1P26358 1616 aaKnown RBP19.41■□□□□ 0.7
PMS1-221ENST00000624204 MYH16Q9H6N6 1097 aa19.4■□□□□ 0.7
PMS1-221ENST00000624204 MCM4P33991 863 aa19.39■□□□□ 0.7
PMS1-221ENST00000624204 COG6Q9Y2V7 657 aa19.39■□□□□ 0.69
PMS1-221ENST00000624204 PLEKHH2Q8IVE3 1493 aa19.39■□□□□ 0.69
PMS1-221ENST00000624204 BCL2L13Q9BXK5 485 aa19.39■□□□□ 0.69
PMS1-221ENST00000624204 GAPVD1Q14C86 1478 aa19.38■□□□□ 0.69
PMS1-221ENST00000624204 FOXD4L1Q9NU39 408 aa19.38■□□□□ 0.69
PMS1-221ENST00000624204 CLUAP1Q96AJ1 413 aa19.38■□□□□ 0.69
PMS1-221ENST00000624204 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
PMS1-221ENST00000624204 TRAK2O60296 914 aa19.37■□□□□ 0.69
PMS1-221ENST00000624204 TRIM44Q96DX7 344 aaPredicted RBP19.37■□□□□ 0.69
PMS1-221ENST00000624204 FSD2A1L4K1 749 aa19.37■□□□□ 0.69
PMS1-221ENST00000624204 SLFN5Q08AF3 891 aa19.37■□□□□ 0.69
PMS1-221ENST00000624204 PANK1Q8TE04 598 aa19.37■□□□□ 0.69
PMS1-221ENST00000624204 KIAA0586Q9BVV6 1533 aa19.36■□□□□ 0.69
PMS1-221ENST00000624204 SPINK5Q9NQ38 1064 aaPredicted RBP19.36■□□□□ 0.69
PMS1-221ENST00000624204 ANKRD50Q9ULJ7 1429 aa19.36■□□□□ 0.69
PMS1-221ENST00000624204 ESPNB1AK53 854 aa19.36■□□□□ 0.69
PMS1-221ENST00000624204 ANKRD30AQ9BXX3 1397 aa19.35■□□□□ 0.69
PMS1-221ENST00000624204 DISP3Q9P2K9 1392 aa19.35■□□□□ 0.69
PMS1-221ENST00000624204 MRE11P49959 708 aa19.35■□□□□ 0.69
PMS1-221ENST00000624204 KNSTRNQ9Y448 316 aa19.35■□□□□ 0.69
PMS1-221ENST00000624204 APAF1O14727 1248 aa19.34■□□□□ 0.69
PMS1-221ENST00000624204 EIF3AQ14152 1382 aaKnown RBP19.33■□□□□ 0.69
PMS1-221ENST00000624204 PPP2R1AP30153 589 aa19.33■□□□□ 0.68
PMS1-221ENST00000624204 TNNT2P45379 298 aaPredicted RBP19.33■□□□□ 0.68
PMS1-221ENST00000624204 TMF1P82094 1093 aa19.32■□□□□ 0.68
PMS1-221ENST00000624204 GRPEL1Q9HAV7 217 aa19.32■□□□□ 0.68
PMS1-221ENST00000624204 E9PCH4 1651 aa19.31■□□□□ 0.68
PMS1-221ENST00000624204 TBC1D32Q96NH3 1257 aa19.31■□□□□ 0.68
PMS1-221ENST00000624204 CGNL1Q0VF96 1302 aa19.3■□□□□ 0.68
PMS1-221ENST00000624204 ERBB4Q15303 1308 aa19.3■□□□□ 0.68
PMS1-221ENST00000624204 A0A0U1RQG5 324 aaPredicted RBP19.3■□□□□ 0.68
PMS1-221ENST00000624204 MFAP1P55081 439 aaKnown RBP19.3■□□□□ 0.68
PMS1-221ENST00000624204 RBM10P98175 930 aaKnown RBP19.29■□□□□ 0.68
PMS1-221ENST00000624204 CAMSAP2Q08AD1 1489 aa19.29■□□□□ 0.68
PMS1-221ENST00000624204 ZNF521Q96K83 1311 aa19.29■□□□□ 0.68
PMS1-221ENST00000624204 INSRP06213 1382 aa19.29■□□□□ 0.68
PMS1-221ENST00000624204 TESK2Q96S53 571 aa19.28■□□□□ 0.68
PMS1-221ENST00000624204 CHMP5Q9NZZ3 219 aa19.28■□□□□ 0.68
PMS1-221ENST00000624204 RRP7AQ9Y3A4 280 aaKnown RBP19.28■□□□□ 0.68
PMS1-221ENST00000624204 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
PMS1-221ENST00000624204 ARHGEF12Q9NZN5 1544 aa19.28■□□□□ 0.68
PMS1-221ENST00000624204 WDR62O43379 1518 aa19.27■□□□□ 0.68
PMS1-221ENST00000624204 PRG4Q92954 1404 aaPredicted RBP19.26■□□□□ 0.67
PMS1-221ENST00000624204 KIF21AQ7Z4S6 1674 aa19.26■□□□□ 0.67
PMS1-221ENST00000624204 LAMC3Q9Y6N6 1575 aa19.26■□□□□ 0.67
PMS1-221ENST00000624204 CENPJQ9HC77 1338 aaPredicted RBP19.25■□□□□ 0.67
PMS1-221ENST00000624204 PLEKHG5O94827 1062 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms