RNA–Protein interactions for RNA: ENST00000620660.4

RYK-208, Transcript of receptor-like tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RYK, Length 2,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RYK-208ENST00000620660 NBPF1Q3BBV0 1214 aa28.87■■■□□ 2.21
RYK-208ENST00000620660 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
RYK-208ENST00000620660 PBRM1Q86U86 1689 aa28.85■■■□□ 2.21
RYK-208ENST00000620660 USP35Q9P2H5 1018 aa28.85■■■□□ 2.21
RYK-208ENST00000620660 FBLN2P98095 1184 aa28.85■■■□□ 2.21
RYK-208ENST00000620660 PDE3BQ13370 1112 aa28.84■■■□□ 2.21
RYK-208ENST00000620660 KIAA0586Q9BVV6 1533 aa28.83■■■□□ 2.21
RYK-208ENST00000620660 ADAMTS12P58397 1594 aa28.83■■■□□ 2.21
RYK-208ENST00000620660 GPATCH8Q9UKJ3 1502 aaKnown RBP28.82■■■□□ 2.2
RYK-208ENST00000620660 TROQ12816 1431 aaPredicted RBP28.82■■■□□ 2.2
RYK-208ENST00000620660 DISP1Q96F81 1524 aa28.81■■■□□ 2.2
RYK-208ENST00000620660 PLB1Q6P1J6 1458 aa28.8■■■□□ 2.2
RYK-208ENST00000620660 NFKBIBQ15653 356 aa28.8■■■□□ 2.2
RYK-208ENST00000620660 DDRGK1Q96HY6 314 aa28.8■■■□□ 2.2
RYK-208ENST00000620660 TSPY4P0CV99 314 aa28.8■■■□□ 2.2
RYK-208ENST00000620660 TSPY10P0CW01 314 aa28.8■■■□□ 2.2
RYK-208ENST00000620660 UHRF1BP1Q6BDS2 1440 aa28.79■■■□□ 2.2
RYK-208ENST00000620660 RGS3P49796 1198 aa28.79■■■□□ 2.2
RYK-208ENST00000620660 HNRNPMP52272 730 aaKnown RBP eCLIP28.79■■■□□ 2.23e-7■■■■□ 21
RYK-208ENST00000620660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.79■■■□□ 2.2
RYK-208ENST00000620660 RAPGEF6Q8TEU7 1601 aa28.78■■■□□ 2.2
RYK-208ENST00000620660 PANK3Q9H999 370 aa28.78■■■□□ 2.2
RYK-208ENST00000620660 KIAA0556O60303 1618 aa28.77■■■□□ 2.2
RYK-208ENST00000620660 PARD3Q8TEW0 1356 aa28.77■■■□□ 2.2
RYK-208ENST00000620660 GSE1Q14687 1217 aa28.76■■■□□ 2.19
RYK-208ENST00000620660 ZNF608Q9ULD9 1512 aaPredicted RBP28.74■■■□□ 2.19
RYK-208ENST00000620660 PER1O15534 1290 aaPredicted RBP28.73■■■□□ 2.19
RYK-208ENST00000620660 FRAT1Q92837 279 aaPredicted RBP28.73■■■□□ 2.19
RYK-208ENST00000620660 ADGBQ8N7X0 1667 aa28.72■■■□□ 2.19
RYK-208ENST00000620660 C9orf84Q5VXU9 1444 aa28.71■■■□□ 2.19
RYK-208ENST00000620660 ADAMTS8Q9UP79 889 aa28.71■■■□□ 2.19
RYK-208ENST00000620660 WASHC2CQ9Y4E1 1318 aa28.71■■■□□ 2.19
RYK-208ENST00000620660 DISP3Q9P2K9 1392 aa28.69■■■□□ 2.18
RYK-208ENST00000620660 ADGRL2O95490 1459 aa28.68■■■□□ 2.18
RYK-208ENST00000620660 PLEKHD1A6NEE1 506 aa28.67■■■□□ 2.18
RYK-208ENST00000620660 EIF5BO60841 1220 aaKnown RBP28.65■■■□□ 2.18
RYK-208ENST00000620660 ARHGEF12Q9NZN5 1544 aa28.64■■■□□ 2.17
RYK-208ENST00000620660 ITSN2Q9NZM3 1697 aa28.63■■■□□ 2.17
RYK-208ENST00000620660 FRAT2O75474 233 aaPredicted RBP28.63■■■□□ 2.17
RYK-208ENST00000620660 WDR43Q15061 677 aaKnown RBP eCLIP28.62■■■□□ 2.17
RYK-208ENST00000620660 CHMP7Q8WUX9 453 aaPredicted RBP28.62■■■□□ 2.17
RYK-208ENST00000620660 CCDC144AA2RUR9 1427 aa28.6■■■□□ 2.17
RYK-208ENST00000620660 CCDC146Q8IYE0 955 aa28.59■■■□□ 2.17
RYK-208ENST00000620660 E9PCH4 1651 aa28.59■■■□□ 2.17
RYK-208ENST00000620660 FAM161AQ3B820 660 aa28.59■■■□□ 2.17
RYK-208ENST00000620660 CENPQQ7L2Z9 268 aaPredicted RBP28.58■■■□□ 2.17
RYK-208ENST00000620660 C8orf34Q49A92 452 aa28.58■■■□□ 2.17
RYK-208ENST00000620660 KDM2BQ8NHM5 1336 aa28.58■■■□□ 2.17
RYK-208ENST00000620660 CROCC2H7BZ55 1655 aa28.57■■■□□ 2.16
RYK-208ENST00000620660 TESK2Q96S53 571 aa28.57■■■□□ 2.16
RYK-208ENST00000620660 PRAG1Q86YV5 1406 aa28.56■■■□□ 2.16
RYK-208ENST00000620660 PLEKHH1Q9ULM0 1364 aa28.56■■■□□ 2.16
RYK-208ENST00000620660 TMF1P82094 1093 aa28.55■■■□□ 2.16
RYK-208ENST00000620660 BLMP54132 1417 aaPredicted RBP28.54■■■□□ 2.16
RYK-208ENST00000620660 DUSP27Q5VZP5 1158 aa28.53■■■□□ 2.16
RYK-208ENST00000620660 CEP170Q5SW79 1584 aa28.52■■■□□ 2.16
RYK-208ENST00000620660 GRIN2AQ12879 1464 aa28.51■■■□□ 2.15
RYK-208ENST00000620660 KNSTRNQ9Y448 316 aa28.51■■■□□ 2.15
RYK-208ENST00000620660 GOLGA2Q08379 1002 aa28.5■■■□□ 2.15
RYK-208ENST00000620660 KDM5DQ9BY66 1539 aa28.49■■■□□ 2.15
RYK-208ENST00000620660 ERBINQ96RT1 1412 aa28.49■■■□□ 2.15
RYK-208ENST00000620660 ARXQ96QS3 562 aa28.48■■■□□ 2.15
RYK-208ENST00000620660 COL17A1Q9UMD9 1497 aaPredicted RBP28.48■■■□□ 2.15
RYK-208ENST00000620660 JPH4Q96JJ6 628 aa28.48■■■□□ 2.15
RYK-208ENST00000620660 PPP2R1AP30153 589 aa28.47■■■□□ 2.15
RYK-208ENST00000620660 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.46■■■□□ 2.15
RYK-208ENST00000620660 ZMYM4Q5VZL5 1548 aa28.46■■■□□ 2.15
RYK-208ENST00000620660 BCAR3O75815 825 aa28.46■■■□□ 2.15
RYK-208ENST00000620660 CDC42BPAQ5VT25 1732 aa28.45■■■□□ 2.14
RYK-208ENST00000620660 FAM135AQ9P2D6 1515 aa28.44■■■□□ 2.14
RYK-208ENST00000620660 SPINK5Q9NQ38 1064 aaPredicted RBP28.43■■■□□ 2.14
RYK-208ENST00000620660 SLKQ9H2G2 1235 aaPredicted RBP28.43■■■□□ 2.14
RYK-208ENST00000620660 MRC2Q9UBG0 1479 aa28.43■■■□□ 2.14
RYK-208ENST00000620660 TRPM1Q7Z4N2 1603 aa28.43■■■□□ 2.14
RYK-208ENST00000620660 A2MP01023 1474 aa28.42■■■□□ 2.14
RYK-208ENST00000620660 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
RYK-208ENST00000620660 APAF1O14727 1248 aa28.4■■■□□ 2.14
RYK-208ENST00000620660 MAGI1Q96QZ7 1491 aaPredicted RBP28.4■■■□□ 2.14
RYK-208ENST00000620660 PTPRGP23470 1445 aa28.37■■■□□ 2.13
RYK-208ENST00000620660 CARMIL2Q6F5E8 1435 aa28.37■■■□□ 2.13
RYK-208ENST00000620660 CANXP27824 592 aaKnown RBP28.37■■■□□ 2.13
RYK-208ENST00000620660 SHANK2Q9UPX8 1470 aa28.37■■■□□ 2.13
RYK-208ENST00000620660 IGHDP01880 384 aa28.36■■■□□ 2.13
RYK-208ENST00000620660 PLEKHH2Q8IVE3 1493 aa28.35■■■□□ 2.13
RYK-208ENST00000620660 ADCY10Q96PN6 1610 aa28.34■■■□□ 2.13
RYK-208ENST00000620660 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
RYK-208ENST00000620660 SEC24BO95487 1268 aa28.34■■■□□ 2.13
RYK-208ENST00000620660 POGKQ9P215 609 aa28.34■■■□□ 2.13
RYK-208ENST00000620660 SLFN5Q08AF3 891 aa28.34■■■□□ 2.13
RYK-208ENST00000620660 ATP10BO94823 1461 aa28.33■■■□□ 2.13
RYK-208ENST00000620660 PLA2R1Q13018 1463 aa28.33■■■□□ 2.13
RYK-208ENST00000620660 ABCC10Q5T3U5 1492 aa28.33■■■□□ 2.13
RYK-208ENST00000620660 MAGI2Q86UL8 1455 aa28.32■■■□□ 2.12
RYK-208ENST00000620660 GPRASP1Q5JY77 1395 aa28.32■■■□□ 2.12
RYK-208ENST00000620660 DMRT2Q9Y5R5 561 aa28.32■■■□□ 2.12
RYK-208ENST00000620660 NEUROD2Q15784 382 aa28.31■■■□□ 2.12
RYK-208ENST00000620660 COG6Q9Y2V7 657 aa28.3■■■□□ 2.12
RYK-208ENST00000620660 PANK1Q8TE04 598 aa28.3■■■□□ 2.12
RYK-208ENST00000620660 AMER1Q5JTC6 1135 aaPredicted RBP28.29■■■□□ 2.12
RYK-208ENST00000620660 ZNF521Q96K83 1311 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms