RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 ARHGEF12Q9NZN5 1544 aa19.71■□□□□ 0.75
SRRT-217ENST00000618411 BLMP54132 1417 aaPredicted RBP19.71■□□□□ 0.75
SRRT-217ENST00000618411 WDR62O43379 1518 aa19.7■□□□□ 0.74
SRRT-217ENST00000618411 PKD2Q13563 968 aa19.7■□□□□ 0.74
SRRT-217ENST00000618411 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
SRRT-217ENST00000618411 TDRD9Q8NDG6 1382 aaKnown RBP19.69■□□□□ 0.74
SRRT-217ENST00000618411 ZNF644Q9H582 1327 aaPredicted RBP19.69■□□□□ 0.74
SRRT-217ENST00000618411 C20orf194Q5TEA3 1177 aa19.66■□□□□ 0.74
SRRT-217ENST00000618411 PER1O15534 1290 aaPredicted RBP19.65■□□□□ 0.74
SRRT-217ENST00000618411 ADGBQ8N7X0 1667 aa19.63■□□□□ 0.73
SRRT-217ENST00000618411 ADGRL2O95490 1459 aa19.62■□□□□ 0.73
SRRT-217ENST00000618411 L1TD1Q5T7N2 865 aaKnown RBP19.62■□□□□ 0.73
SRRT-217ENST00000618411 GLIPR1L2Q4G1C9 344 aa19.61■□□□□ 0.73
SRRT-217ENST00000618411 IQGAP2Q13576 1575 aa19.61■□□□□ 0.73
SRRT-217ENST00000618411 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.6■□□□□ 0.73
SRRT-217ENST00000618411 URB2Q14146 1524 aaKnown RBP19.58■□□□□ 0.73
SRRT-217ENST00000618411 ARID3CA6NKF2 412 aa19.58■□□□□ 0.72
SRRT-217ENST00000618411 RRAGDQ9NQL2 400 aaPredicted RBP19.58■□□□□ 0.72
SRRT-217ENST00000618411 POGKQ9P215 609 aa19.58■□□□□ 0.72
SRRT-217ENST00000618411 KIAA0586Q9BVV6 1533 aa19.58■□□□□ 0.72
SRRT-217ENST00000618411 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
SRRT-217ENST00000618411 CAMSAP2Q08AD1 1489 aa19.56■□□□□ 0.72
SRRT-217ENST00000618411 KDM2AQ9Y2K7 1162 aa19.56■□□□□ 0.72
SRRT-217ENST00000618411 ANKRD30AQ9BXX3 1397 aa19.56■□□□□ 0.72
SRRT-217ENST00000618411 RGS3P49796 1198 aa19.56■□□□□ 0.72
SRRT-217ENST00000618411 PKNOX2Q96KN3 472 aa19.56■□□□□ 0.72
SRRT-217ENST00000618411 DUSP27Q5VZP5 1158 aa19.55■□□□□ 0.72
SRRT-217ENST00000618411 ANKRD50Q9ULJ7 1429 aa19.54■□□□□ 0.72
SRRT-217ENST00000618411 BECN1Q14457 450 aa19.54■□□□□ 0.72
SRRT-217ENST00000618411 USP19O94966 1318 aa19.53■□□□□ 0.72
SRRT-217ENST00000618411 VIRMAQ69YN4 1812 aaKnown RBP19.53■□□□□ 0.72
SRRT-217ENST00000618411 CFDP1Q9UEE9 299 aaPredicted RBP19.52■□□□□ 0.72
SRRT-217ENST00000618411 CC2D1BQ5T0F9 858 aaKnown RBP19.51■□□□□ 0.71
SRRT-217ENST00000618411 CROCC2H7BZ55 1655 aa19.51■□□□□ 0.71
SRRT-217ENST00000618411 NUP155O75694 1391 aa19.51■□□□□ 0.71
SRRT-217ENST00000618411 CEP170Q5SW79 1584 aa19.51■□□□□ 0.71
SRRT-217ENST00000618411 EIF3AQ14152 1382 aaKnown RBP19.5■□□□□ 0.71
SRRT-217ENST00000618411 ITSN2Q9NZM3 1697 aa19.49■□□□□ 0.71
SRRT-217ENST00000618411 ADAMTS8Q9UP79 889 aa19.49■□□□□ 0.71
SRRT-217ENST00000618411 ZNF521Q96K83 1311 aa19.49■□□□□ 0.71
SRRT-217ENST00000618411 COL17A1Q9UMD9 1497 aaPredicted RBP19.49■□□□□ 0.71
SRRT-217ENST00000618411 GOLGA2Q08379 1002 aa19.48■□□□□ 0.71
SRRT-217ENST00000618411 NUP153P49790 1475 aaKnown RBP19.48■□□□□ 0.71
SRRT-217ENST00000618411 KDM5DQ9BY66 1539 aa19.48■□□□□ 0.71
SRRT-217ENST00000618411 PLEKHH1Q9ULM0 1364 aa19.47■□□□□ 0.71
SRRT-217ENST00000618411 TRPM1Q7Z4N2 1603 aa19.46■□□□□ 0.71
SRRT-217ENST00000618411 PANK3Q9H999 370 aa19.46■□□□□ 0.71
SRRT-217ENST00000618411 TROQ12816 1431 aaPredicted RBP19.45■□□□□ 0.7
SRRT-217ENST00000618411 GPATCH8Q9UKJ3 1502 aaKnown RBP19.45■□□□□ 0.7
SRRT-217ENST00000618411 CLCN1P35523 988 aa19.45■□□□□ 0.7
SRRT-217ENST00000618411 GPRASP1Q5JY77 1395 aa19.45■□□□□ 0.7
SRRT-217ENST00000618411 ANTXR1Q9H6X2 564 aa19.45■□□□□ 0.7
SRRT-217ENST00000618411 PRAG1Q86YV5 1406 aa19.45■□□□□ 0.7
SRRT-217ENST00000618411 PNNQ9H307 717 aaKnown RBP19.45■□□□□ 0.7
SRRT-217ENST00000618411 MAPK8IP3Q9UPT6 1336 aa19.44■□□□□ 0.7
SRRT-217ENST00000618411 SLFN5Q08AF3 891 aa19.43■□□□□ 0.7
SRRT-217ENST00000618411 FSD2A1L4K1 749 aa19.42■□□□□ 0.7
SRRT-217ENST00000618411 RRP9O43818 475 aaKnown RBP19.42■□□□□ 0.7
SRRT-217ENST00000618411 CLASP1Q7Z460 1538 aa19.42■□□□□ 0.7
SRRT-217ENST00000618411 XRCC6P12956 609 aaKnown RBP eCLIP19.42■□□□□ 0.7
SRRT-217ENST00000618411 TESK2Q96S53 571 aa19.42■□□□□ 0.7
SRRT-217ENST00000618411 SLKQ9H2G2 1235 aaPredicted RBP19.42■□□□□ 0.7
SRRT-217ENST00000618411 RAPGEF6Q8TEU7 1601 aa19.42■□□□□ 0.7
SRRT-217ENST00000618411 GOLGA6L3A6NEY3 463 aa19.42■□□□□ 0.7
SRRT-217ENST00000618411 WDR43Q15061 677 aaKnown RBP eCLIP19.42■□□□□ 0.7
SRRT-217ENST00000618411 TRMT2AQ8IZ69 625 aaKnown RBP19.42■□□□□ 0.7
SRRT-217ENST00000618411 PTPRGP23470 1445 aa19.41■□□□□ 0.7
SRRT-217ENST00000618411 NAP1L5Q96NT1 182 aaPredicted RBP19.41■□□□□ 0.7
SRRT-217ENST00000618411 LAMC1P11047 1609 aa19.41■□□□□ 0.7
SRRT-217ENST00000618411 DISP3Q9P2K9 1392 aa19.41■□□□□ 0.7
SRRT-217ENST00000618411 HSP90AA2PQ14568 343 aaPredicted RBP19.4■□□□□ 0.7
SRRT-217ENST00000618411 ZNF777Q9ULD5 760 aaPredicted RBP19.4■□□□□ 0.7
SRRT-217ENST00000618411 PRG4Q92954 1404 aaPredicted RBP19.4■□□□□ 0.7
SRRT-217ENST00000618411 TARBP1Q13395 1621 aaKnown RBP19.4■□□□□ 0.7
SRRT-217ENST00000618411 SEC24BO95487 1268 aa19.39■□□□□ 0.7
SRRT-217ENST00000618411 SHANK2Q9UPX8 1470 aa19.39■□□□□ 0.69
SRRT-217ENST00000618411 HSP90AA1P07900 732 aaKnown RBP19.39■□□□□ 0.69
SRRT-217ENST00000618411 EIF4G3O43432 1585 aaKnown RBP19.39■□□□□ 0.69
SRRT-217ENST00000618411 NLRP1Q9C000 1473 aa19.39■□□□□ 0.69
SRRT-217ENST00000618411 IGHDP01880 384 aa19.38■□□□□ 0.69
SRRT-217ENST00000618411 NBPF1Q3BBV0 1214 aa19.38■□□□□ 0.69
SRRT-217ENST00000618411 ERBINQ96RT1 1412 aa19.38■□□□□ 0.69
SRRT-217ENST00000618411 PBRM1Q86U86 1689 aa19.38■□□□□ 0.69
SRRT-217ENST00000618411 ADAMTS12P58397 1594 aa19.38■□□□□ 0.69
SRRT-217ENST00000618411 VSIG10Q8N0Z9 540 aa19.38■□□□□ 0.69
SRRT-217ENST00000618411 ZMYND15Q9H091 742 aa19.38■□□□□ 0.69
SRRT-217ENST00000618411 PRDM15P57071 1507 aaPredicted RBP19.37■□□□□ 0.69
SRRT-217ENST00000618411 KIAA0556O60303 1618 aa19.37■□□□□ 0.69
SRRT-217ENST00000618411 CGNL1Q0VF96 1302 aa19.37■□□□□ 0.69
SRRT-217ENST00000618411 TMF1P82094 1093 aa19.37■□□□□ 0.69
SRRT-217ENST00000618411 NKTRP30414 1462 aaKnown RBP19.36■□□□□ 0.69
SRRT-217ENST00000618411 PPP2R1AP30153 589 aa19.36■□□□□ 0.69
SRRT-217ENST00000618411 ADCY10Q96PN6 1610 aa19.36■□□□□ 0.69
SRRT-217ENST00000618411 DISP1Q96F81 1524 aa19.35■□□□□ 0.69
SRRT-217ENST00000618411 PDE3AQ14432 1141 aa19.35■□□□□ 0.69
SRRT-217ENST00000618411 UPF2Q9HAU5 1272 aaKnown RBP19.35■□□□□ 0.69
SRRT-217ENST00000618411 C9orf84Q5VXU9 1444 aa19.35■□□□□ 0.69
SRRT-217ENST00000618411 ZMYM3Q14202 1370 aa19.34■□□□□ 0.69
SRRT-217ENST00000618411 MCM4P33991 863 aa19.33■□□□□ 0.69
SRRT-217ENST00000618411 TBC1D32Q96NH3 1257 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms