RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 MYT1LQ9UL68 1186 aa29.51■■■□□ 2.31
CNTNAP3B-212ENST00000617422 FAM69CQ0P6D2 419 aa29.5■■■□□ 2.31
CNTNAP3B-212ENST00000617422 DEPDC5O75140 1603 aa29.5■■■□□ 2.31
CNTNAP3B-212ENST00000617422 DHX29Q7Z478 1369 aaKnown RBP29.48■■■□□ 2.31
CNTNAP3B-212ENST00000617422 PLA2R1Q13018 1463 aa29.47■■■□□ 2.31
CNTNAP3B-212ENST00000617422 RAPGEF3O95398 923 aa29.47■■■□□ 2.31
CNTNAP3B-212ENST00000617422 MLH3Q9UHC1 1453 aa29.46■■■□□ 2.31
CNTNAP3B-212ENST00000617422 HECW2Q9P2P5 1572 aa29.45■■■□□ 2.31
CNTNAP3B-212ENST00000617422 HIRIP3Q9BW71 556 aaPredicted RBP29.43■■■□□ 2.3
CNTNAP3B-212ENST00000617422 PPRC1Q5VV67 1664 aaKnown RBP29.43■■■□□ 2.3
CNTNAP3B-212ENST00000617422 RICTORQ6R327 1708 aa29.43■■■□□ 2.3
CNTNAP3B-212ENST00000617422 NBPF8Q3BBV2 869 aa29.43■■■□□ 2.3
CNTNAP3B-212ENST00000617422 EIF2AK4Q9P2K8 1649 aaKnown RBP29.43■■■□□ 2.3
CNTNAP3B-212ENST00000617422 MROH1Q8NDA8 1641 aa29.42■■■□□ 2.3
CNTNAP3B-212ENST00000617422 TSPOAP1O95153 1857 aa29.42■■■□□ 2.3
CNTNAP3B-212ENST00000617422 KIF3BO15066 747 aa29.41■■■□□ 2.3
CNTNAP3B-212ENST00000617422 ABCA6Q8N139 1617 aa29.41■■■□□ 2.3
CNTNAP3B-212ENST00000617422 FRMPD1Q5SYB0 1578 aa29.41■■■□□ 2.3
CNTNAP3B-212ENST00000617422 VWDEQ8N2E2 1590 aa29.39■■■□□ 2.3
CNTNAP3B-212ENST00000617422 A2MP01023 1474 aa29.38■■■□□ 2.29
CNTNAP3B-212ENST00000617422 CENPBP07199 599 aaPredicted RBP29.38■■■□□ 2.29
CNTNAP3B-212ENST00000617422 E9PCH4 1651 aa29.37■■■□□ 2.29
CNTNAP3B-212ENST00000617422 PRDM15P57071 1507 aaPredicted RBP29.36■■■□□ 2.29
CNTNAP3B-212ENST00000617422 KIF13AQ9H1H9 1805 aa29.36■■■□□ 2.29
CNTNAP3B-212ENST00000617422 ATP10AO60312 1499 aa29.32■■■□□ 2.28
CNTNAP3B-212ENST00000617422 CCDC144AA2RUR9 1427 aa29.32■■■□□ 2.28
CNTNAP3B-212ENST00000617422 TET3O43151 1660 aa29.31■■■□□ 2.28
CNTNAP3B-212ENST00000617422 DIP2CQ9Y2E4 1556 aa29.3■■■□□ 2.28
CNTNAP3B-212ENST00000617422 RNF17Q9BXT8 1623 aaKnown RBP29.29■■■□□ 2.28
CNTNAP3B-212ENST00000617422 MIER1Q8N108 512 aa29.28■■■□□ 2.28
CNTNAP3B-212ENST00000617422 YEATS2Q9ULM3 1422 aa29.27■■■□□ 2.28
CNTNAP3B-212ENST00000617422 KANK1Q14678 1352 aa29.26■■■□□ 2.27
CNTNAP3B-212ENST00000617422 BCORL1Q5H9F3 1711 aa29.24■■■□□ 2.27
CNTNAP3B-212ENST00000617422 HSPA5P11021 654 aaKnown RBP29.22■■■□□ 2.27
CNTNAP3B-212ENST00000617422 CEP152O94986 1710 aa29.22■■■□□ 2.27
CNTNAP3B-212ENST00000617422 SPHKAPQ2M3C7 1700 aa29.22■■■□□ 2.27
CNTNAP3B-212ENST00000617422 UHRF1BP1Q6BDS2 1440 aa29.21■■■□□ 2.27
CNTNAP3B-212ENST00000617422 ZNF326Q5BKZ1 582 aaKnown RBP29.21■■■□□ 2.27
CNTNAP3B-212ENST00000617422 PTPRTO14522 1441 aa29.21■■■□□ 2.27
CNTNAP3B-212ENST00000617422 ZMYM4Q5VZL5 1548 aa29.2■■■□□ 2.27
CNTNAP3B-212ENST00000617422 TRPM2O94759 1503 aa29.2■■■□□ 2.26
CNTNAP3B-212ENST00000617422 DCAF11Q8TEB1 546 aa29.19■■■□□ 2.26
CNTNAP3B-212ENST00000617422 KDM2AQ9Y2K7 1162 aa29.18■■■□□ 2.26
CNTNAP3B-212ENST00000617422 EFCAB6Q5THR3 1501 aa29.18■■■□□ 2.26
CNTNAP3B-212ENST00000617422 LMTK2Q8IWU2 1503 aa29.17■■■□□ 2.26
CNTNAP3B-212ENST00000617422 RGL3Q3MIN7 710 aa29.17■■■□□ 2.26
CNTNAP3B-212ENST00000617422 EIF4G2P78344 907 aaKnown RBP eCLIP29.16■■■□□ 2.26
CNTNAP3B-212ENST00000617422 GGT6Q6P531 493 aa29.16■■■□□ 2.26
CNTNAP3B-212ENST00000617422 CLTCL1P53675 1640 aa29.15■■■□□ 2.26
CNTNAP3B-212ENST00000617422 COL17A1Q9UMD9 1497 aaPredicted RBP29.15■■■□□ 2.26
CNTNAP3B-212ENST00000617422 DDX10Q13206 875 aaKnown RBP29.14■■■□□ 2.26
CNTNAP3B-212ENST00000617422 SPATA31E1Q6ZUB1 1445 aa29.14■■■□□ 2.25
CNTNAP3B-212ENST00000617422 RALGAPBQ86X10 1494 aa29.11■■■□□ 2.25
CNTNAP3B-212ENST00000617422 ABCC3O15438 1527 aa29.09■■■□□ 2.25
CNTNAP3B-212ENST00000617422 UGGT1Q9NYU2 1555 aa29.09■■■□□ 2.25
CNTNAP3B-212ENST00000617422 PRAG1Q86YV5 1406 aa29.07■■■□□ 2.24
CNTNAP3B-212ENST00000617422 NPATQ14207 1427 aa29.06■■■□□ 2.24
CNTNAP3B-212ENST00000617422 GTF3C3Q9Y5Q9 886 aa29.05■■■□□ 2.24
CNTNAP3B-212ENST00000617422 C11orf95C9JLR9 678 aaPredicted RBP29.04■■■□□ 2.24
CNTNAP3B-212ENST00000617422 WASHC2AQ641Q2 1341 aa29.04■■■□□ 2.24
CNTNAP3B-212ENST00000617422 CFAP65Q6ZU64 1925 aaKnown RBP29.03■■■□□ 2.24
CNTNAP3B-212ENST00000617422 WASHC2CQ9Y4E1 1318 aa29.03■■■□□ 2.24
CNTNAP3B-212ENST00000617422 TRPM1Q7Z4N2 1603 aa29.02■■■□□ 2.24
CNTNAP3B-212ENST00000617422 CAMSAP1Q5T5Y3 1602 aa29.01■■■□□ 2.24
CNTNAP3B-212ENST00000617422 SIGLEC1Q9BZZ2 1709 aa29.01■■■□□ 2.24
CNTNAP3B-212ENST00000617422 USP47Q96K76 1375 aa29.01■■■□□ 2.23
CNTNAP3B-212ENST00000617422 REREQ9P2R6 1566 aa28.96■■■□□ 2.23
CNTNAP3B-212ENST00000617422 CARD11Q9BXL7 1154 aa28.95■■■□□ 2.23
CNTNAP3B-212ENST00000617422 NBPF1Q3BBV0 1214 aa28.94■■■□□ 2.22
CNTNAP3B-212ENST00000617422 ROCK2O75116 1388 aaKnown RBP28.93■■■□□ 2.22
CNTNAP3B-212ENST00000617422 MROH2AA6NES4 1674 aa28.93■■■□□ 2.22
CNTNAP3B-212ENST00000617422 ZC3H13Q5T200 1668 aaKnown RBP28.93■■■□□ 2.22
CNTNAP3B-212ENST00000617422 NEURL4Q96JN8 1562 aa28.92■■■□□ 2.22
CNTNAP3B-212ENST00000617422 KIF1BO60333 1816 aa28.92■■■□□ 2.22
CNTNAP3B-212ENST00000617422 MADDQ8WXG6 1647 aa28.91■■■□□ 2.22
CNTNAP3B-212ENST00000617422 CCDC7Q96M83 1385 aa28.91■■■□□ 2.22
CNTNAP3B-212ENST00000617422 ARHGEF40Q8TER5 1519 aa28.91■■■□□ 2.22
CNTNAP3B-212ENST00000617422 POLR1AO95602 1720 aaPredicted RBP28.9■■■□□ 2.22
CNTNAP3B-212ENST00000617422 AGLP35573 1532 aa28.9■■■□□ 2.22
CNTNAP3B-212ENST00000617422 NOS1P29475 1434 aa28.88■■■□□ 2.21
CNTNAP3B-212ENST00000617422 GPRASP1Q5JY77 1395 aa28.88■■■□□ 2.21
CNTNAP3B-212ENST00000617422 CNTLNQ9NXG0 1405 aa28.88■■■□□ 2.21
CNTNAP3B-212ENST00000617422 KIF7Q2M1P5 1343 aa28.87■■■□□ 2.21
CNTNAP3B-212ENST00000617422 ARHGAP31Q2M1Z3 1444 aa28.87■■■□□ 2.21
CNTNAP3B-212ENST00000617422 SYNMO15061 1565 aa28.87■■■□□ 2.21
CNTNAP3B-212ENST00000617422 ADGRB3O60242 1522 aa28.85■■■□□ 2.21
CNTNAP3B-212ENST00000617422 IFT172Q9UG01 1749 aa28.84■■■□□ 2.21
CNTNAP3B-212ENST00000617422 LAMC1P11047 1609 aa28.82■■■□□ 2.2
CNTNAP3B-212ENST00000617422 ST20-MTHFSA0A0A6YYL1 179 aa28.82■■■□□ 2.2
CNTNAP3B-212ENST00000617422 PIK3C2BO00750 1634 aa28.82■■■□□ 2.2
CNTNAP3B-212ENST00000617422 PREX1Q8TCU6 1659 aa28.78■■■□□ 2.2
CNTNAP3B-212ENST00000617422 YTHDC1Q96MU7 727 aaKnown RBP28.77■■■□□ 2.2
CNTNAP3B-212ENST00000617422 MYOM2P54296 1465 aa28.76■■■□□ 2.19
CNTNAP3B-212ENST00000617422 CLTCQ00610 1675 aaKnown RBP28.75■■■□□ 2.19
CNTNAP3B-212ENST00000617422 CHGAP10645 457 aaKnown RBP28.75■■■□□ 2.19
CNTNAP3B-212ENST00000617422 ADGRF5Q8IZF2 1346 aa28.75■■■□□ 2.19
CNTNAP3B-212ENST00000617422 STAC3Q96MF2 364 aa28.75■■■□□ 2.19
CNTNAP3B-212ENST00000617422 MLECQ14165 292 aa28.74■■■□□ 2.19
CNTNAP3B-212ENST00000617422 TRHP20396 242 aaPredicted RBP28.73■■■□□ 2.19
CNTNAP3B-212ENST00000617422 FBXO31Q5XUX0 539 aaPredicted RBP28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms