RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 HSPA5P11021 654 aaKnown RBP11.05□□□□□ -0.64
NEK3-207ENST00000617054 FAM135AQ9P2D6 1515 aa11.05□□□□□ -0.64
NEK3-207ENST00000617054 DCAF11Q8TEB1 546 aa11.04□□□□□ -0.64
NEK3-207ENST00000617054 NCBP3Q53F19 620 aaKnown RBP11.04□□□□□ -0.64
NEK3-207ENST00000617054 ACIN1Q9UKV3 1341 aaKnown RBP11.03□□□□□ -0.64
NEK3-207ENST00000617054 MAST1Q9Y2H9 1570 aa11.03□□□□□ -0.64
NEK3-207ENST00000617054 TEX14Q8IWB6 1497 aa11.02□□□□□ -0.64
NEK3-207ENST00000617054 DUOX2Q9NRD8 1548 aa11.02□□□□□ -0.64
NEK3-207ENST00000617054 ZFYVE16Q7Z3T8 1539 aa11.02□□□□□ -0.65
NEK3-207ENST00000617054 C11orf95C9JLR9 678 aaPredicted RBP11.01□□□□□ -0.65
NEK3-207ENST00000617054 GGT6Q6P531 493 aa11.01□□□□□ -0.65
NEK3-207ENST00000617054 PLXNC1O60486 1568 aa11.01□□□□□ -0.65
NEK3-207ENST00000617054 ARAP3Q8WWN8 1544 aa11□□□□□ -0.65
NEK3-207ENST00000617054 EIF4G2P78344 907 aaKnown RBP eCLIP11□□□□□ -0.65
NEK3-207ENST00000617054 ATP7AQ04656 1500 aa11□□□□□ -0.65
NEK3-207ENST00000617054 PLA2R1Q13018 1463 aa10.99□□□□□ -0.65
NEK3-207ENST00000617054 ERBINQ96RT1 1412 aa10.99□□□□□ -0.65
NEK3-207ENST00000617054 RTEL1-TNFRSF6BF6WH68 1400 aa10.99□□□□□ -0.65
NEK3-207ENST00000617054 POLR3GLQ9BT43 218 aa10.99□□□□□ -0.65
NEK3-207ENST00000617054 KDM5DQ9BY66 1539 aa10.99□□□□□ -0.65
NEK3-207ENST00000617054 CCDC144AA2RUR9 1427 aa10.98□□□□□ -0.65
NEK3-207ENST00000617054 CNGB1Q14028 1251 aaPredicted RBP10.97□□□□□ -0.65
NEK3-207ENST00000617054 PIAS4Q8N2W9 510 aaPredicted RBP10.97□□□□□ -0.65
NEK3-207ENST00000617054 WASHC2AQ641Q2 1341 aa10.97□□□□□ -0.65
NEK3-207ENST00000617054 DHX29Q7Z478 1369 aaKnown RBP10.97□□□□□ -0.65
NEK3-207ENST00000617054 TSPOAP1O95153 1857 aa10.97□□□□□ -0.65
NEK3-207ENST00000617054 ZNF518AQ6AHZ1 1483 aa10.96□□□□□ -0.65
NEK3-207ENST00000617054 UNC13BO14795 1591 aa10.96□□□□□ -0.65
NEK3-207ENST00000617054 KIDINS220Q9ULH0 1771 aa10.96□□□□□ -0.66
NEK3-207ENST00000617054 INO80Q9ULG1 1556 aaPredicted RBP10.95□□□□□ -0.66
NEK3-207ENST00000617054 POGZQ7Z3K3 1410 aa10.95□□□□□ -0.66
NEK3-207ENST00000617054 NBPF1Q3BBV0 1214 aa10.95□□□□□ -0.66
NEK3-207ENST00000617054 CARD11Q9BXL7 1154 aa10.94□□□□□ -0.66
NEK3-207ENST00000617054 IQGAP3Q86VI3 1631 aa10.94□□□□□ -0.66
NEK3-207ENST00000617054 CFAP65Q6ZU64 1925 aaKnown RBP10.94□□□□□ -0.66
NEK3-207ENST00000617054 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
NEK3-207ENST00000617054 A2MP01023 1474 aa10.92□□□□□ -0.66
NEK3-207ENST00000617054 YEATS2Q9ULM3 1422 aa10.92□□□□□ -0.66
NEK3-207ENST00000617054 MAGI2Q86UL8 1455 aa10.92□□□□□ -0.66
NEK3-207ENST00000617054 KANK1Q14678 1352 aa10.92□□□□□ -0.66
NEK3-207ENST00000617054 CHGAP10645 457 aaKnown RBP10.91□□□□□ -0.66
NEK3-207ENST00000617054 WASHC2CQ9Y4E1 1318 aa10.91□□□□□ -0.66
NEK3-207ENST00000617054 USP47Q96K76 1375 aa10.91□□□□□ -0.66
NEK3-207ENST00000617054 E9PCH4 1651 aa10.91□□□□□ -0.66
NEK3-207ENST00000617054 ST20-MTHFSA0A0A6YYL1 179 aa10.9□□□□□ -0.66
NEK3-207ENST00000617054 MAP3K4Q9Y6R4 1608 aa10.9□□□□□ -0.66
NEK3-207ENST00000617054 UGGT1Q9NYU2 1555 aa10.9□□□□□ -0.67
NEK3-207ENST00000617054 NEO1Q92859 1461 aa10.89□□□□□ -0.67
NEK3-207ENST00000617054 MLECQ14165 292 aa10.89□□□□□ -0.67
NEK3-207ENST00000617054 TAOK2Q9UL54 1235 aa10.89□□□□□ -0.67
NEK3-207ENST00000617054 ROCK2O75116 1388 aaKnown RBP10.89□□□□□ -0.67
NEK3-207ENST00000617054 ATP10AO60312 1499 aa10.89□□□□□ -0.67
NEK3-207ENST00000617054 SPATA31E1Q6ZUB1 1445 aa10.89□□□□□ -0.67
NEK3-207ENST00000617054 KIF7Q2M1P5 1343 aa10.89□□□□□ -0.67
NEK3-207ENST00000617054 DIP2BQ9P265 1576 aa10.89□□□□□ -0.67
NEK3-207ENST00000617054 TPRNQ4KMQ1 711 aa10.89□□□□□ -0.67
NEK3-207ENST00000617054 MLH3Q9UHC1 1453 aa10.88□□□□□ -0.67
NEK3-207ENST00000617054 KDM5CP41229 1560 aa10.88□□□□□ -0.67
NEK3-207ENST00000617054 FRMPD1Q5SYB0 1578 aa10.88□□□□□ -0.67
NEK3-207ENST00000617054 ANP32CO43423 234 aa10.88□□□□□ -0.67
NEK3-207ENST00000617054 HAP1P54257 671 aaPredicted RBP10.88□□□□□ -0.67
NEK3-207ENST00000617054 NUTM2DQ5VT03 806 aaPredicted RBP10.88□□□□□ -0.67
NEK3-207ENST00000617054 ABCA6Q8N139 1617 aa10.88□□□□□ -0.67
NEK3-207ENST00000617054 HECW2Q9P2P5 1572 aa10.88□□□□□ -0.67
NEK3-207ENST00000617054 MROH1Q8NDA8 1641 aa10.87□□□□□ -0.67
NEK3-207ENST00000617054 CFAP74Q9C0B2 1584 aa10.87□□□□□ -0.67
NEK3-207ENST00000617054 CCDC7Q96M83 1385 aa10.87□□□□□ -0.67
NEK3-207ENST00000617054 DEPDC5O75140 1603 aa10.86□□□□□ -0.67
NEK3-207ENST00000617054 CENPBP07199 599 aaPredicted RBP10.86□□□□□ -0.67
NEK3-207ENST00000617054 UHRF1BP1Q6BDS2 1440 aa10.86□□□□□ -0.67
NEK3-207ENST00000617054 PRAG1Q86YV5 1406 aa10.85□□□□□ -0.67
NEK3-207ENST00000617054 COL17A1Q9UMD9 1497 aaPredicted RBP10.85□□□□□ -0.67
NEK3-207ENST00000617054 CEP152O94986 1710 aa10.85□□□□□ -0.67
NEK3-207ENST00000617054 RICTORQ6R327 1708 aa10.84□□□□□ -0.67
NEK3-207ENST00000617054 PRDM15P57071 1507 aaPredicted RBP10.84□□□□□ -0.67
NEK3-207ENST00000617054 SCAF1Q9H7N4 1312 aaKnown RBP10.84□□□□□ -0.67
NEK3-207ENST00000617054 MAPK8IP2Q13387 824 aaPredicted RBP10.84□□□□□ -0.67
NEK3-207ENST00000617054 GLI2P10070 1586 aa10.84□□□□□ -0.67
NEK3-207ENST00000617054 CLTCL1P53675 1640 aa10.83□□□□□ -0.67
NEK3-207ENST00000617054 PLCB2Q00722 1185 aa10.83□□□□□ -0.67
NEK3-207ENST00000617054 PTPRTO14522 1441 aa10.83□□□□□ -0.68
NEK3-207ENST00000617054 VWDEQ8N2E2 1590 aa10.83□□□□□ -0.68
NEK3-207ENST00000617054 BCORL1Q5H9F3 1711 aa10.83□□□□□ -0.68
NEK3-207ENST00000617054 TRHP20396 242 aaPredicted RBP10.83□□□□□ -0.68
NEK3-207ENST00000617054 FBXO31Q5XUX0 539 aaPredicted RBP10.83□□□□□ -0.68
NEK3-207ENST00000617054 NPATQ14207 1427 aa10.83□□□□□ -0.68
NEK3-207ENST00000617054 RALGAPBQ86X10 1494 aa10.83□□□□□ -0.68
NEK3-207ENST00000617054 DIP2CQ9Y2E4 1556 aa10.83□□□□□ -0.68
NEK3-207ENST00000617054 TET3O43151 1660 aa10.83□□□□□ -0.68
NEK3-207ENST00000617054 PPRC1Q5VV67 1664 aaKnown RBP10.83□□□□□ -0.68
NEK3-207ENST00000617054 CCDC184Q52MB2 194 aa10.82□□□□□ -0.68
NEK3-207ENST00000617054 ADGRF5Q8IZF2 1346 aa10.82□□□□□ -0.68
NEK3-207ENST00000617054 SPHKAPQ2M3C7 1700 aa10.82□□□□□ -0.68
NEK3-207ENST00000617054 EIF2AK4Q9P2K8 1649 aaKnown RBP10.82□□□□□ -0.68
NEK3-207ENST00000617054 CFAP70Q5T0N1 1121 aa10.82□□□□□ -0.68
NEK3-207ENST00000617054 TRPM2O94759 1503 aa10.81□□□□□ -0.68
NEK3-207ENST00000617054 EFCAB6Q5THR3 1501 aa10.8□□□□□ -0.68
NEK3-207ENST00000617054 KIF13AQ9H1H9 1805 aa10.8□□□□□ -0.68
NEK3-207ENST00000617054 GTF3C3Q9Y5Q9 886 aa10.79□□□□□ -0.68
NEK3-207ENST00000617054 TRPM1Q7Z4N2 1603 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms