RNA–Protein interactions for RNA: ENST00000616659.1

C3orf49-203, Transcript of chromosome 3 open reading frame 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C3orf49, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-203ENST00000616659 ZBED2Q9BTP6 218 aa11.54□□□□□ -0.56
C3orf49-203ENST00000616659 VPS9D1Q9Y2B5 631 aa11.54□□□□□ -0.56
C3orf49-203ENST00000616659 PPP1R3GB7ZBB8 358 aa11.51□□□□□ -0.57
C3orf49-203ENST00000616659 KCNV2Q8TDN2 545 aa11.51□□□□□ -0.57
C3orf49-203ENST00000616659 COL9A1P20849 921 aa11.5□□□□□ -0.57
C3orf49-203ENST00000616659 EN1Q05925 392 aaPredicted RBP11.48□□□□□ -0.57
C3orf49-203ENST00000616659 NBR1Q14596 966 aa11.48□□□□□ -0.57
C3orf49-203ENST00000616659 BHMG1C9JSJ3 638 aaPredicted RBP11.47□□□□□ -0.57
C3orf49-203ENST00000616659 C6orf132Q5T0Z8 1188 aa11.47□□□□□ -0.57
C3orf49-203ENST00000616659 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.57
C3orf49-203ENST00000616659 ARHGEF1Q92888 912 aaKnown RBP11.46□□□□□ -0.57
C3orf49-203ENST00000616659 RBM33Q96EV2 1170 aaKnown RBP11.45□□□□□ -0.58
C3orf49-203ENST00000616659 PROX2Q3B8N5 592 aa11.44□□□□□ -0.58
C3orf49-203ENST00000616659 TSR1Q2NL82 804 aaKnown RBP11.42□□□□□ -0.58
C3orf49-203ENST00000616659 GRXCR2A6NFK2 248 aa11.41□□□□□ -0.58
C3orf49-203ENST00000616659 MAP3K7O43318 606 aa11.41□□□□□ -0.58
C3orf49-203ENST00000616659 OSBPP22059 807 aa11.4□□□□□ -0.58
C3orf49-203ENST00000616659 P3H3Q8IVL6 736 aa11.4□□□□□ -0.58
C3orf49-203ENST00000616659 RABGEF1Q9UJ41 708 aa11.39□□□□□ -0.59
C3orf49-203ENST00000616659 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
C3orf49-203ENST00000616659 STAC3Q96MF2 364 aa11.37□□□□□ -0.59
C3orf49-203ENST00000616659 NBPF3Q9H094 633 aa11.37□□□□□ -0.59
C3orf49-203ENST00000616659 ONECUT3O60422 494 aaPredicted RBP11.36□□□□□ -0.59
C3orf49-203ENST00000616659 KCTD12Q96CX2 325 aaKnown RBP11.36□□□□□ -0.59
C3orf49-203ENST00000616659 TRIM6-TRIM34B2RNG4 842 aa11.35□□□□□ -0.59
C3orf49-203ENST00000616659 MLLT3P42568 568 aaPredicted RBP11.35□□□□□ -0.59
C3orf49-203ENST00000616659 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
C3orf49-203ENST00000616659 CDHR5Q9HBB8 845 aa11.35□□□□□ -0.59
C3orf49-203ENST00000616659 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
C3orf49-203ENST00000616659 HCSTQ9UBK5 93 aa11.33□□□□□ -0.6
C3orf49-203ENST00000616659 KDM2AQ9Y2K7 1162 aa11.33□□□□□ -0.6
C3orf49-203ENST00000616659 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
C3orf49-203ENST00000616659 THSD4Q6ZMP0 1018 aa11.3□□□□□ -0.6
C3orf49-203ENST00000616659 LAPTM4BQ86VI4 370 aa11.3□□□□□ -0.6
C3orf49-203ENST00000616659 CERKQ8TCT0 537 aa11.3□□□□□ -0.6
C3orf49-203ENST00000616659 PRSS12P56730 875 aa11.28□□□□□ -0.6
C3orf49-203ENST00000616659 WNT2BQ93097 391 aa11.28□□□□□ -0.6
C3orf49-203ENST00000616659 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
C3orf49-203ENST00000616659 FAM198AQ9UFP1 575 aa11.28□□□□□ -0.6
C3orf49-203ENST00000616659 SEPT9Q9UHD8 586 aaPredicted RBP11.28□□□□□ -0.6
C3orf49-203ENST00000616659 GOLGA8CPA6NN73 597 aa11.27□□□□□ -0.61
C3orf49-203ENST00000616659 SEMA3EO15041 775 aa11.27□□□□□ -0.61
C3orf49-203ENST00000616659 NPDC1Q9NQX5 325 aaPredicted RBP11.27□□□□□ -0.61
C3orf49-203ENST00000616659 RBM27Q9P2N5 1060 aaKnown RBP11.26□□□□□ -0.61
C3orf49-203ENST00000616659 C3orf80F5H4A9 247 aa11.24□□□□□ -0.61
C3orf49-203ENST00000616659 FAM98CQ17RN3 349 aaKnown RBP11.24□□□□□ -0.61
C3orf49-203ENST00000616659 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
C3orf49-203ENST00000616659 PACS2Q86VP3 889 aa11.23□□□□□ -0.61
C3orf49-203ENST00000616659 TTC13Q8NBP0 860 aa11.23□□□□□ -0.61
C3orf49-203ENST00000616659 ANKK1Q8NFD2 765 aa11.23□□□□□ -0.61
C3orf49-203ENST00000616659 PTPN5P54829 565 aa11.22□□□□□ -0.61
C3orf49-203ENST00000616659 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
C3orf49-203ENST00000616659 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
C3orf49-203ENST00000616659 SOWAHBA6NEL2 793 aa11.2□□□□□ -0.62
C3orf49-203ENST00000616659 BCAMP50895 628 aa11.19□□□□□ -0.62
C3orf49-203ENST00000616659 PADI6Q6TGC4 694 aa11.19□□□□□ -0.62
C3orf49-203ENST00000616659 NBPF26B4DH59 902 aa11.18□□□□□ -0.62
C3orf49-203ENST00000616659 PTGDRQ13258 359 aa11.18□□□□□ -0.62
C3orf49-203ENST00000616659 SMAPO00193 183 aa11.17□□□□□ -0.62
C3orf49-203ENST00000616659 TATDN2Q93075 761 aa11.17□□□□□ -0.62
C3orf49-203ENST00000616659 PLA2G2EQ9NZK7 142 aa11.16□□□□□ -0.62
C3orf49-203ENST00000616659 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
C3orf49-203ENST00000616659 NUDT18Q6ZVK8 323 aa11.14□□□□□ -0.63
C3orf49-203ENST00000616659 NUTM2FA1L443 756 aa11.12□□□□□ -0.63
C3orf49-203ENST00000616659 LRCH3Q96II8 777 aa11.12□□□□□ -0.63
C3orf49-203ENST00000616659 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.12□□□□□ -0.63
C3orf49-203ENST00000616659 RBM26Q5T8P6 1007 aaKnown RBP11.1□□□□□ -0.63
C3orf49-203ENST00000616659 SAMD7Q7Z3H4 446 aa11.1□□□□□ -0.63
C3orf49-203ENST00000616659 WBP1LQ9NX94 342 aa11.1□□□□□ -0.63
C3orf49-203ENST00000616659 EYA1Q99502 592 aa11.09□□□□□ -0.63
C3orf49-203ENST00000616659 GPR37O15354 613 aa11.08□□□□□ -0.64
C3orf49-203ENST00000616659 FCHSD2O94868 740 aa11.08□□□□□ -0.64
C3orf49-203ENST00000616659 SMYD5Q6GMV2 418 aa11.08□□□□□ -0.64
C3orf49-203ENST00000616659 NYAP1Q6ZVC0 841 aa11.08□□□□□ -0.64
C3orf49-203ENST00000616659 TSR3Q9UJK0 312 aaKnown RBP11.08□□□□□ -0.64
C3orf49-203ENST00000616659 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
C3orf49-203ENST00000616659 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
C3orf49-203ENST00000616659 ADGRG1Q9Y653 693 aa11.05□□□□□ -0.64
C3orf49-203ENST00000616659 ITGBL1O95965 494 aaPredicted RBP11.04□□□□□ -0.64
C3orf49-203ENST00000616659 HIC1Q14526 733 aa11.03□□□□□ -0.64
C3orf49-203ENST00000616659 SWT1Q5T5J6 900 aaKnown RBP11.02□□□□□ -0.65
C3orf49-203ENST00000616659 PPP4CP60510 307 aa11□□□□□ -0.65
C3orf49-203ENST00000616659 FAM161AQ3B820 660 aa11□□□□□ -0.65
C3orf49-203ENST00000616659 RBM46Q8TBY0 533 aaKnown RBP10.99□□□□□ -0.65
C3orf49-203ENST00000616659 GNPATO15228 680 aa10.98□□□□□ -0.65
C3orf49-203ENST00000616659 FECHP22830 423 aa10.98□□□□□ -0.65
C3orf49-203ENST00000616659 DNAJB2P25686 324 aa10.98□□□□□ -0.65
C3orf49-203ENST00000616659 TMEM134Q9H6X4 195 aa10.97□□□□□ -0.65
C3orf49-203ENST00000616659 RNF40O75150 1001 aa10.96□□□□□ -0.65
C3orf49-203ENST00000616659 HDGFP51858 240 aaKnown RBP10.96□□□□□ -0.65
C3orf49-203ENST00000616659 GPIHBP1Q8IV16 184 aa10.96□□□□□ -0.65
C3orf49-203ENST00000616659 SLF2Q8IX21 1173 aa10.96□□□□□ -0.65
C3orf49-203ENST00000616659 PXYLP1Q8TE99 480 aa10.96□□□□□ -0.65
C3orf49-203ENST00000616659 A0A0G2JS52 829 aa10.95□□□□□ -0.66
C3orf49-203ENST00000616659 RCCD1A6NED2 376 aa10.95□□□□□ -0.66
C3orf49-203ENST00000616659 APLP1P51693 650 aa10.93□□□□□ -0.66
C3orf49-203ENST00000616659 METTL3Q86U44 580 aaKnown RBP10.93□□□□□ -0.66
C3orf49-203ENST00000616659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.92□□□□□ -0.66
C3orf49-203ENST00000616659 OATP04181 439 aa10.91□□□□□ -0.66
C3orf49-203ENST00000616659 TJAP1Q5JTD0 557 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms