RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CHMP4AQ9BY43 222 aa12.19□□□□□ -0.46
CLTCL1-208ENST00000615606 SUPT16HQ9Y5B9 1047 aaKnown RBP12.18□□□□□ -0.46
CLTCL1-208ENST00000615606 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
CLTCL1-208ENST00000615606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLTCL1-208ENST00000615606 USP47Q96K76 1375 aa12.18□□□□□ -0.46
CLTCL1-208ENST00000615606 CCDC9Q9Y3X0 531 aaKnown RBP12.18□□□□□ -0.46
CLTCL1-208ENST00000615606 MINK1Q8N4C8 1332 aaPredicted RBP12.18□□□□□ -0.46
CLTCL1-208ENST00000615606 POGZQ7Z3K3 1410 aa12.18□□□□□ -0.46
CLTCL1-208ENST00000615606 NLRP13Q86W25 1043 aa12.17□□□□□ -0.46
CLTCL1-208ENST00000615606 SUPT6HQ7KZ85 1726 aaKnown RBP12.17□□□□□ -0.46
CLTCL1-208ENST00000615606 CDK13Q14004 1512 aaKnown RBP12.17□□□□□ -0.46
CLTCL1-208ENST00000615606 RAPGEF3O95398 923 aa12.16□□□□□ -0.46
CLTCL1-208ENST00000615606 CD109Q6YHK3 1445 aa12.16□□□□□ -0.46
CLTCL1-208ENST00000615606 CGNL1Q0VF96 1302 aa12.15□□□□□ -0.46
CLTCL1-208ENST00000615606 COG3Q96JB2 828 aa12.15□□□□□ -0.46
CLTCL1-208ENST00000615606 PLB1Q6P1J6 1458 aa12.15□□□□□ -0.46
CLTCL1-208ENST00000615606 CASC1Q6TDU7 716 aa12.15□□□□□ -0.46
CLTCL1-208ENST00000615606 HFM1A2PYH4 1435 aa12.15□□□□□ -0.47
CLTCL1-208ENST00000615606 PANK3Q9H999 370 aa12.15□□□□□ -0.47
CLTCL1-208ENST00000615606 CENPJQ9HC77 1338 aaPredicted RBP12.14□□□□□ -0.47
CLTCL1-208ENST00000615606 OS9Q13438 667 aaPredicted RBP12.14□□□□□ -0.47
CLTCL1-208ENST00000615606 LMOD3Q0VAK6 560 aa12.13□□□□□ -0.47
CLTCL1-208ENST00000615606 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
CLTCL1-208ENST00000615606 DAPK1P53355 1430 aa12.13□□□□□ -0.47
CLTCL1-208ENST00000615606 SLC52A1Q9NWF4 448 aa12.12□□□□□ -0.47
CLTCL1-208ENST00000615606 THEMISQ8N1K5 641 aaPredicted RBP12.12□□□□□ -0.47
CLTCL1-208ENST00000615606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLTCL1-208ENST00000615606 TXNDC2Q86VQ3 553 aa12.11□□□□□ -0.47
CLTCL1-208ENST00000615606 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
CLTCL1-208ENST00000615606 PCF11O94913 1555 aaKnown RBP12.11□□□□□ -0.47
CLTCL1-208ENST00000615606 ATF3P18847 181 aa12.11□□□□□ -0.47
CLTCL1-208ENST00000615606 LTV1Q96GA3 475 aaPredicted RBP12.11□□□□□ -0.47
CLTCL1-208ENST00000615606 KIF14Q15058 1648 aa12.1□□□□□ -0.47
CLTCL1-208ENST00000615606 MYBBP1AQ9BQG0 1328 aaKnown RBP12.1□□□□□ -0.47
CLTCL1-208ENST00000615606 CCDC141Q6ZP82 1450 aa12.1□□□□□ -0.47
CLTCL1-208ENST00000615606 PSME1Q06323 249 aa12.1□□□□□ -0.47
CLTCL1-208ENST00000615606 PPP4R2Q9NY27 417 aa12.1□□□□□ -0.47
CLTCL1-208ENST00000615606 KIAA1107Q9UPP5 1409 aa12.09□□□□□ -0.47
CLTCL1-208ENST00000615606 STK31Q9BXU1 1019 aa12.08□□□□□ -0.48
CLTCL1-208ENST00000615606 ROCK1Q13464 1354 aa12.07□□□□□ -0.48
CLTCL1-208ENST00000615606 ADGRL1O94910 1474 aa12.07□□□□□ -0.48
CLTCL1-208ENST00000615606 BECN1Q14457 450 aa12.07□□□□□ -0.48
CLTCL1-208ENST00000615606 GOLGA2Q08379 1002 aa12.07□□□□□ -0.48
CLTCL1-208ENST00000615606 EVA1CP58658 441 aa12.06□□□□□ -0.48
CLTCL1-208ENST00000615606 ANP32BQ92688 251 aaKnown RBP12.06□□□□□ -0.48
CLTCL1-208ENST00000615606 MAP3K1Q13233 1512 aa12.06□□□□□ -0.48
CLTCL1-208ENST00000615606 TMEM132EQ6IEE7 984 aa12.05□□□□□ -0.48
CLTCL1-208ENST00000615606 DDRGK1Q96HY6 314 aa12.05□□□□□ -0.48
CLTCL1-208ENST00000615606 ZNF330Q9Y3S2 320 aaPredicted RBP12.05□□□□□ -0.48
CLTCL1-208ENST00000615606 RPGRIP1LQ68CZ1 1315 aa12.04□□□□□ -0.48
CLTCL1-208ENST00000615606 PDE3BQ13370 1112 aa12.04□□□□□ -0.48
CLTCL1-208ENST00000615606 CAMSAP2Q08AD1 1489 aa12.04□□□□□ -0.48
CLTCL1-208ENST00000615606 CFAP70Q5T0N1 1121 aa12.04□□□□□ -0.48
CLTCL1-208ENST00000615606 HDAC5Q9UQL6 1122 aa12.04□□□□□ -0.48
CLTCL1-208ENST00000615606 CCDC146Q8IYE0 955 aa12.04□□□□□ -0.48
CLTCL1-208ENST00000615606 ANKLE2Q86XL3 938 aa12.03□□□□□ -0.48
CLTCL1-208ENST00000615606 RCAN3Q9UKA8 241 aa12.03□□□□□ -0.48
CLTCL1-208ENST00000615606 C1orf141Q5JVX7 400 aa12.03□□□□□ -0.48
CLTCL1-208ENST00000615606 PROSER2Q86WR7 435 aaPredicted RBP12.03□□□□□ -0.48
CLTCL1-208ENST00000615606 RGS3P49796 1198 aa12.02□□□□□ -0.48
CLTCL1-208ENST00000615606 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.49
CLTCL1-208ENST00000615606 PRKRIP1Q9H875 184 aaPredicted RBP12.01□□□□□ -0.49
CLTCL1-208ENST00000615606 ANKRD30BQ9BXX2 1392 aa12.01□□□□□ -0.49
CLTCL1-208ENST00000615606 DIAPH1O60610 1272 aaKnown RBP12□□□□□ -0.49
CLTCL1-208ENST00000615606 SMC4Q9NTJ3 1288 aa12□□□□□ -0.49
CLTCL1-208ENST00000615606 GPRASP1Q5JY77 1395 aa12□□□□□ -0.49
CLTCL1-208ENST00000615606 FANCAO15360 1455 aa12□□□□□ -0.49
CLTCL1-208ENST00000615606 WDR62O43379 1518 aa12□□□□□ -0.49
CLTCL1-208ENST00000615606 CABP2Q9NPB3 220 aa12□□□□□ -0.49
CLTCL1-208ENST00000615606 KIF21AQ7Z4S6 1674 aa11.99□□□□□ -0.49
CLTCL1-208ENST00000615606 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
CLTCL1-208ENST00000615606 ITPRIPQ8IWB1 547 aa11.99□□□□□ -0.49
CLTCL1-208ENST00000615606 MEX3CQ5U5Q3 659 aaKnown RBP11.99□□□□□ -0.49
CLTCL1-208ENST00000615606 CFAP44Q96MT7 982 aa11.99□□□□□ -0.49
CLTCL1-208ENST00000615606 ERBINQ96RT1 1412 aa11.99□□□□□ -0.49
CLTCL1-208ENST00000615606 PTPN23Q9H3S7 1636 aa11.98□□□□□ -0.49
CLTCL1-208ENST00000615606 AKNAQ7Z591 1439 aa11.98□□□□□ -0.49
CLTCL1-208ENST00000615606 CCDC7Q96M83 1385 aa11.98□□□□□ -0.49
CLTCL1-208ENST00000615606 NBR1Q14596 966 aa11.98□□□□□ -0.49
CLTCL1-208ENST00000615606 ABCC5O15440 1437 aa11.98□□□□□ -0.49
CLTCL1-208ENST00000615606 KCNJ4P48050 445 aa11.98□□□□□ -0.49
CLTCL1-208ENST00000615606 TEFQ10587 303 aa11.98□□□□□ -0.49
CLTCL1-208ENST00000615606 PRAM1Q96QH2 718 aa11.98□□□□□ -0.49
CLTCL1-208ENST00000615606 PPP6R1Q9UPN7 881 aa11.98□□□□□ -0.49
CLTCL1-208ENST00000615606 NAIPQ13075 1403 aa11.97□□□□□ -0.49
CLTCL1-208ENST00000615606 TMX4Q9H1E5 349 aaPredicted RBP11.97□□□□□ -0.49
CLTCL1-208ENST00000615606 KIF7Q2M1P5 1343 aa11.97□□□□□ -0.49
CLTCL1-208ENST00000615606 RAPGEF6Q8TEU7 1601 aa11.97□□□□□ -0.49
CLTCL1-208ENST00000615606 NGEFQ8N5V2 710 aa11.97□□□□□ -0.49
CLTCL1-208ENST00000615606 TEX14Q8IWB6 1497 aa11.96□□□□□ -0.49
CLTCL1-208ENST00000615606 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.49
CLTCL1-208ENST00000615606 RWDD1Q9H446 243 aaPredicted RBP11.96□□□□□ -0.5
CLTCL1-208ENST00000615606 ASXL2Q76L83 1435 aa11.96□□□□□ -0.5
CLTCL1-208ENST00000615606 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.5
CLTCL1-208ENST00000615606 ERICH6BQ5W0A0 696 aa11.96□□□□□ -0.5
CLTCL1-208ENST00000615606 NLRP6P59044 892 aa11.95□□□□□ -0.5
CLTCL1-208ENST00000615606 RRP7AQ9Y3A4 280 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-208ENST00000615606 ESCO1Q5FWF5 840 aa11.95□□□□□ -0.5
CLTCL1-208ENST00000615606 EIF4G3O43432 1585 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-208ENST00000615606 B4GALNT3Q6L9W6 998 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms