RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 FRMPD1Q5SYB0 1578 aa18.63■□□□□ 0.57
FOXN3-219ENST00000615335 COL17A1Q9UMD9 1497 aaPredicted RBP18.63■□□□□ 0.57
FOXN3-219ENST00000615335 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
FOXN3-219ENST00000615335 DUOX2Q9NRD8 1548 aa18.63■□□□□ 0.57
FOXN3-219ENST00000615335 ERBINQ96RT1 1412 aa18.58■□□□□ 0.56
FOXN3-219ENST00000615335 ZMYM4Q5VZL5 1548 aa18.58■□□□□ 0.56
FOXN3-219ENST00000615335 ABCA6Q8N139 1617 aa18.56■□□□□ 0.56
FOXN3-219ENST00000615335 YEATS2Q9ULM3 1422 aa18.56■□□□□ 0.56
FOXN3-219ENST00000615335 DHX29Q7Z478 1369 aaKnown RBP18.56■□□□□ 0.56
FOXN3-219ENST00000615335 MAGI2Q86UL8 1455 aa18.55■□□□□ 0.56
FOXN3-219ENST00000615335 A2MP01023 1474 aa18.55■□□□□ 0.56
FOXN3-219ENST00000615335 DIP2CQ9Y2E4 1556 aa18.54■□□□□ 0.56
FOXN3-219ENST00000615335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.561e-6■□□□□ 10.2
FOXN3-219ENST00000615335 KIF3BO15066 747 aa18.52■□□□□ 0.56
FOXN3-219ENST00000615335 NUP155O75694 1391 aa18.52■□□□□ 0.56
FOXN3-219ENST00000615335 MPHOSPH9Q99550 1183 aa18.5■□□□□ 0.55
FOXN3-219ENST00000615335 SLC4A1APQ9BWU0 796 aaKnown RBP18.5■□□□□ 0.55
FOXN3-219ENST00000615335 ATP10AO60312 1499 aa18.49■□□□□ 0.55
FOXN3-219ENST00000615335 EIF2AK4Q9P2K8 1649 aaKnown RBP18.48■□□□□ 0.55
FOXN3-219ENST00000615335 UNC13BO14795 1591 aa18.47■□□□□ 0.55
FOXN3-219ENST00000615335 PZPP20742 1482 aa18.45■□□□□ 0.54
FOXN3-219ENST00000615335 GGT6Q6P531 493 aa18.45■□□□□ 0.54
FOXN3-219ENST00000615335 ARHGEF40Q8TER5 1519 aa18.45■□□□□ 0.54
FOXN3-219ENST00000615335 KDM5DQ9BY66 1539 aa18.44■□□□□ 0.54
FOXN3-219ENST00000615335 FOXD1Q16676 465 aa18.43■□□□□ 0.54
FOXN3-219ENST00000615335 DEPDC5O75140 1603 aa18.43■□□□□ 0.54
FOXN3-219ENST00000615335 FAM135AQ9P2D6 1515 aa18.43■□□□□ 0.54
FOXN3-219ENST00000615335 KANK1Q14678 1352 aa18.42■□□□□ 0.54
FOXN3-219ENST00000615335 PKD2Q13563 968 aa18.42■□□□□ 0.54
FOXN3-219ENST00000615335 IQGAP3Q86VI3 1631 aa18.4■□□□□ 0.54
FOXN3-219ENST00000615335 BCORL1Q5H9F3 1711 aa18.4■□□□□ 0.54
FOXN3-219ENST00000615335 REREQ9P2R6 1566 aa18.4■□□□□ 0.54
FOXN3-219ENST00000615335 RNF17Q9BXT8 1623 aaKnown RBP18.39■□□□□ 0.53
FOXN3-219ENST00000615335 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.53
FOXN3-219ENST00000615335 MROH1Q8NDA8 1641 aa18.39■□□□□ 0.53
FOXN3-219ENST00000615335 ARID4BQ4LE39 1312 aaPredicted RBP18.38■□□□□ 0.53
FOXN3-219ENST00000615335 SIGLEC1Q9BZZ2 1709 aa18.37■□□□□ 0.53
FOXN3-219ENST00000615335 AGLP35573 1532 aa18.36■□□□□ 0.53
FOXN3-219ENST00000615335 WASHC2CQ9Y4E1 1318 aa18.36■□□□□ 0.53
FOXN3-219ENST00000615335 MLECQ14165 292 aa18.35■□□□□ 0.53
FOXN3-219ENST00000615335 SIN3AQ96ST3 1273 aa18.35■□□□□ 0.53
FOXN3-219ENST00000615335 VWDEQ8N2E2 1590 aa18.34■□□□□ 0.53
FOXN3-219ENST00000615335 CEP152O94986 1710 aa18.32■□□□□ 0.52
FOXN3-219ENST00000615335 ANKRD30BQ9BXX2 1392 aa18.31■□□□□ 0.52
FOXN3-219ENST00000615335 TET3O43151 1660 aa18.31■□□□□ 0.52
FOXN3-219ENST00000615335 ABCC3O15438 1527 aa18.29■□□□□ 0.52
FOXN3-219ENST00000615335 E9PCH4 1651 aa18.29■□□□□ 0.52
FOXN3-219ENST00000615335 LMTK2Q8IWU2 1503 aa18.28■□□□□ 0.52
FOXN3-219ENST00000615335 PPP6R1Q9UPN7 881 aa18.27■□□□□ 0.52
FOXN3-219ENST00000615335 ESF1Q9H501 851 aaKnown RBP18.27■□□□□ 0.51
FOXN3-219ENST00000615335 ZC3H13Q5T200 1668 aaKnown RBP18.26■□□□□ 0.51
FOXN3-219ENST00000615335 EFCAB6Q5THR3 1501 aa18.26■□□□□ 0.51
FOXN3-219ENST00000615335 CFAP65Q6ZU64 1925 aaKnown RBP18.24■□□□□ 0.51
FOXN3-219ENST00000615335 CAMSAP1Q5T5Y3 1602 aa18.24■□□□□ 0.51
FOXN3-219ENST00000615335 RBM19Q9Y4C8 960 aaKnown RBP18.23■□□□□ 0.51
FOXN3-219ENST00000615335 NPATQ14207 1427 aa18.22■□□□□ 0.51
FOXN3-219ENST00000615335 CLTCQ00610 1675 aaKnown RBP18.22■□□□□ 0.51
FOXN3-219ENST00000615335 PLA2R1Q13018 1463 aa18.22■□□□□ 0.51
FOXN3-219ENST00000615335 CCDC144AA2RUR9 1427 aa18.21■□□□□ 0.51
FOXN3-219ENST00000615335 RPRD2Q5VT52 1461 aaKnown RBP18.21■□□□□ 0.51
FOXN3-219ENST00000615335 TONSLQ96HA7 1378 aa18.2■□□□□ 0.5
FOXN3-219ENST00000615335 SPHKAPQ2M3C7 1700 aa18.2■□□□□ 0.5
FOXN3-219ENST00000615335 PTPRTO14522 1441 aa18.18■□□□□ 0.5
FOXN3-219ENST00000615335 ARHGAP31Q2M1Z3 1444 aa18.18■□□□□ 0.5
FOXN3-219ENST00000615335 TIMELESSQ9UNS1 1208 aa18.18■□□□□ 0.5
FOXN3-219ENST00000615335 TRPM2O94759 1503 aa18.16■□□□□ 0.5
FOXN3-219ENST00000615335 ZMYM3Q14202 1370 aa18.15■□□□□ 0.5
FOXN3-219ENST00000615335 ERICH6BQ5W0A0 696 aa18.15■□□□□ 0.5
FOXN3-219ENST00000615335 FBXO31Q5XUX0 539 aaPredicted RBP18.14■□□□□ 0.5
FOXN3-219ENST00000615335 CNTLNQ9NXG0 1405 aa18.14■□□□□ 0.49
FOXN3-219ENST00000615335 FER1L4A9Z1Z3 1794 aa18.13■□□□□ 0.49
FOXN3-219ENST00000615335 L3MBTL2Q969R5 705 aa18.13■□□□□ 0.49
FOXN3-219ENST00000615335 NOS1P29475 1434 aa18.12■□□□□ 0.49
FOXN3-219ENST00000615335 UGGT1Q9NYU2 1555 aa18.11■□□□□ 0.49
FOXN3-219ENST00000615335 CLTCL1P53675 1640 aa18.11■□□□□ 0.49
FOXN3-219ENST00000615335 PREX1Q8TCU6 1659 aa18.11■□□□□ 0.49
FOXN3-219ENST00000615335 RGL3Q3MIN7 710 aa18.11■□□□□ 0.49
FOXN3-219ENST00000615335 ANO8Q9HCE9 1232 aaPredicted RBP18.1■□□□□ 0.49
FOXN3-219ENST00000615335 FANCIQ9NVI1 1328 aa18.09■□□□□ 0.49
FOXN3-219ENST00000615335 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
FOXN3-219ENST00000615335 MROH2AA6NES4 1674 aa18.09■□□□□ 0.49
FOXN3-219ENST00000615335 PPP1R15AO75807 674 aaPredicted RBP18.09■□□□□ 0.49
FOXN3-219ENST00000615335 ERVK-7P63135 1459 aa18.08■□□□□ 0.49
FOXN3-219ENST00000615335 SYNMO15061 1565 aa18.08■□□□□ 0.48
FOXN3-219ENST00000615335 CHGAP10645 457 aaKnown RBP18.08■□□□□ 0.48
FOXN3-219ENST00000615335 CEBPAP49715 358 aaPredicted RBP18.08■□□□□ 0.48
FOXN3-219ENST00000615335 MADDQ8WXG6 1647 aa18.07■□□□□ 0.48
FOXN3-219ENST00000615335 SLC52A1Q9NWF4 448 aa18.07■□□□□ 0.48
FOXN3-219ENST00000615335 KIF1BO60333 1816 aa18.06■□□□□ 0.48
FOXN3-219ENST00000615335 MSH5O43196 834 aa18.06■□□□□ 0.48
FOXN3-219ENST00000615335 DDX10Q13206 875 aaKnown RBP18.06■□□□□ 0.48
FOXN3-219ENST00000615335 DCAF11Q8TEB1 546 aa18.06■□□□□ 0.48
FOXN3-219ENST00000615335 UBE2Q2Q8WVN8 375 aa18.06■□□□□ 0.48
FOXN3-219ENST00000615335 IDI1Q13907 227 aa18.05■□□□□ 0.48
FOXN3-219ENST00000615335 SPATA31D1Q6ZQQ2 1576 aa18.05■□□□□ 0.48
FOXN3-219ENST00000615335 ADAMTSL3P82987 1691 aa18.05■□□□□ 0.48
FOXN3-219ENST00000615335 KDM2AQ9Y2K7 1162 aa18.04■□□□□ 0.48
FOXN3-219ENST00000615335 C3P01024 1663 aa18.04■□□□□ 0.48
FOXN3-219ENST00000615335 RIMS1Q86UR5 1692 aaKnown RBP18.04■□□□□ 0.48
FOXN3-219ENST00000615335 SPATA31E1Q6ZUB1 1445 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms