RNA–Protein interactions for RNA: ENST00000612661.1

MARCKS-201, Transcript of myristoylated alanine rich protein kinase C substrate, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MARCKS, Length 4,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARCKS-201ENST00000612661 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
MARCKS-201ENST00000612661 NUDCQ9Y266 331 aa20.67■□□□□ 0.9
MARCKS-201ENST00000612661 ADGRL1O94910 1474 aa20.67■□□□□ 0.9
MARCKS-201ENST00000612661 ASXL2Q76L83 1435 aa20.67■□□□□ 0.9
MARCKS-201ENST00000612661 CFAP70Q5T0N1 1121 aa20.67■□□□□ 0.9
MARCKS-201ENST00000612661 SUPT6HQ7KZ85 1726 aaKnown RBP20.67■□□□□ 0.9
MARCKS-201ENST00000612661 PLEKHH2Q8IVE3 1493 aa20.67■□□□□ 0.9
MARCKS-201ENST00000612661 TXNDC2Q86VQ3 553 aa20.66■□□□□ 0.9
MARCKS-201ENST00000612661 NUP153P49790 1475 aaKnown RBP20.65■□□□□ 0.9
MARCKS-201ENST00000612661 MAPK8IP3Q9UPT6 1336 aa20.64■□□□□ 0.9
MARCKS-201ENST00000612661 PPP4R2Q9NY27 417 aa20.63■□□□□ 0.89
MARCKS-201ENST00000612661 NUP160Q12769 1436 aa20.63■□□□□ 0.89
MARCKS-201ENST00000612661 SLC26A8Q96RN1 970 aa20.61■□□□□ 0.89
MARCKS-201ENST00000612661 FANCAO15360 1455 aa20.61■□□□□ 0.89
MARCKS-201ENST00000612661 EIF3AQ14152 1382 aaKnown RBP20.61■□□□□ 0.89
MARCKS-201ENST00000612661 CAMSAP2Q08AD1 1489 aa20.61■□□□□ 0.89
MARCKS-201ENST00000612661 FBXO31Q5XUX0 539 aaPredicted RBP20.6■□□□□ 0.89
MARCKS-201ENST00000612661 NBPF1Q3BBV0 1214 aa20.59■□□□□ 0.89
MARCKS-201ENST00000612661 ABCC5O15440 1437 aa20.59■□□□□ 0.89
MARCKS-201ENST00000612661 TERF2IPQ9NYB0 399 aa20.58■□□□□ 0.89
MARCKS-201ENST00000612661 CCDC141Q6ZP82 1450 aa20.58■□□□□ 0.89
MARCKS-201ENST00000612661 USP47Q96K76 1375 aa20.58■□□□□ 0.89
MARCKS-201ENST00000612661 HFM1A2PYH4 1435 aa20.58■□□□□ 0.88
MARCKS-201ENST00000612661 KIF14Q15058 1648 aa20.57■□□□□ 0.88
MARCKS-201ENST00000612661 LTV1Q96GA3 475 aaPredicted RBP20.57■□□□□ 0.88
MARCKS-201ENST00000612661 NAIPQ13075 1403 aa20.57■□□□□ 0.88
MARCKS-201ENST00000612661 PANK3Q9H999 370 aa20.57■□□□□ 0.88
MARCKS-201ENST00000612661 CSB-PGBD3P0DP91 1061 aa20.56■□□□□ 0.88
MARCKS-201ENST00000612661 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
MARCKS-201ENST00000612661 ABCA5Q8WWZ7 1642 aa20.55■□□□□ 0.88
MARCKS-201ENST00000612661 UGGT2Q9NYU1 1516 aa20.55■□□□□ 0.88
MARCKS-201ENST00000612661 U2AF1L5P0DN76 240 aaPredicted RBP20.54■□□□□ 0.88
MARCKS-201ENST00000612661 U2AF1Q01081 240 aaKnown RBP eCLIP20.54■□□□□ 0.88
MARCKS-201ENST00000612661 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.54■□□□□ 0.88
MARCKS-201ENST00000612661 GPATCH8Q9UKJ3 1502 aaKnown RBP20.54■□□□□ 0.88
MARCKS-201ENST00000612661 RAPGEF6Q8TEU7 1601 aa20.54■□□□□ 0.88
MARCKS-201ENST00000612661 KIAA0556O60303 1618 aa20.53■□□□□ 0.88
MARCKS-201ENST00000612661 DISP1Q96F81 1524 aa20.53■□□□□ 0.88
MARCKS-201ENST00000612661 AKNAQ7Z591 1439 aa20.53■□□□□ 0.88
MARCKS-201ENST00000612661 ANO8Q9HCE9 1232 aaPredicted RBP20.53■□□□□ 0.88
MARCKS-201ENST00000612661 KTN1Q86UP2 1357 aaKnown RBP20.53■□□□□ 0.88
MARCKS-201ENST00000612661 DENND4BO75064 1496 aaPredicted RBP20.51■□□□□ 0.87
MARCKS-201ENST00000612661 NOP58Q9Y2X3 529 aaKnown RBP20.51■□□□□ 0.87
MARCKS-201ENST00000612661 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
MARCKS-201ENST00000612661 PRKCSHP14314 528 aaPredicted RBP20.51■□□□□ 0.87
MARCKS-201ENST00000612661 THEMISQ8N1K5 641 aaPredicted RBP20.5■□□□□ 0.87
MARCKS-201ENST00000612661 PRKRIP1Q9H875 184 aaPredicted RBP20.5■□□□□ 0.87
MARCKS-201ENST00000612661 EVC2Q86UK5 1308 aa20.5■□□□□ 0.87
MARCKS-201ENST00000612661 NBPF8Q3BBV2 869 aa20.5■□□□□ 0.87
MARCKS-201ENST00000612661 SLC52A1Q9NWF4 448 aa20.5■□□□□ 0.87
MARCKS-201ENST00000612661 CCDC9Q9Y3X0 531 aaKnown RBP20.5■□□□□ 0.87
MARCKS-201ENST00000612661 CENPJQ9HC77 1338 aaPredicted RBP20.49■□□□□ 0.87
MARCKS-201ENST00000612661 NCOA1Q15788 1441 aa20.49■□□□□ 0.87
MARCKS-201ENST00000612661 CABP2Q9NPB3 220 aa20.48■□□□□ 0.87
MARCKS-201ENST00000612661 KIAA1107Q9UPP5 1409 aa20.48■□□□□ 0.87
MARCKS-201ENST00000612661 PTPN23Q9H3S7 1636 aa20.48■□□□□ 0.87
MARCKS-201ENST00000612661 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.47■□□□□ 0.87
MARCKS-201ENST00000612661 CTTNBP2Q8WZ74 1663 aa20.47■□□□□ 0.87
MARCKS-201ENST00000612661 CEP170Q5SW79 1584 aa20.47■□□□□ 0.87
MARCKS-201ENST00000612661 WDR7Q9Y4E6 1490 aa20.46■□□□□ 0.87
MARCKS-201ENST00000612661 POGZQ7Z3K3 1410 aa20.45■□□□□ 0.86
MARCKS-201ENST00000612661 AMPHP49418 695 aa20.45■□□□□ 0.86
MARCKS-201ENST00000612661 PLCH2O75038 1416 aa20.45■□□□□ 0.86
MARCKS-201ENST00000612661 WASHC2AQ641Q2 1341 aa20.45■□□□□ 0.86
MARCKS-201ENST00000612661 IDI1Q13907 227 aa20.44■□□□□ 0.86
MARCKS-201ENST00000612661 NUTM2GQ5VZR2 741 aa20.44■□□□□ 0.86
MARCKS-201ENST00000612661 PROSER2Q86WR7 435 aaPredicted RBP20.43■□□□□ 0.86
MARCKS-201ENST00000612661 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
MARCKS-201ENST00000612661 PRAM1Q96QH2 718 aa20.43■□□□□ 0.86
MARCKS-201ENST00000612661 FRAT1Q92837 279 aaPredicted RBP20.43■□□□□ 0.86
MARCKS-201ENST00000612661 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
MARCKS-201ENST00000612661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.42■□□□□ 0.86
MARCKS-201ENST00000612661 MAP3K1Q13233 1512 aa20.41■□□□□ 0.86
MARCKS-201ENST00000612661 ROCK1Q13464 1354 aa20.41■□□□□ 0.86
MARCKS-201ENST00000612661 CCDC146Q8IYE0 955 aa20.41■□□□□ 0.86
MARCKS-201ENST00000612661 TRAPPC8Q9Y2L5 1435 aa20.41■□□□□ 0.86
MARCKS-201ENST00000612661 PSME1Q06323 249 aa20.41■□□□□ 0.86
MARCKS-201ENST00000612661 ABCC2Q92887 1545 aa20.4■□□□□ 0.86
MARCKS-201ENST00000612661 ANKLE2Q86XL3 938 aa20.4■□□□□ 0.86
MARCKS-201ENST00000612661 ATF3P18847 181 aa20.39■□□□□ 0.86
MARCKS-201ENST00000612661 PTPRKQ15262 1439 aa20.39■□□□□ 0.86
MARCKS-201ENST00000612661 PMFBP1Q8TBY8 1022 aa20.39■□□□□ 0.85
MARCKS-201ENST00000612661 ERBINQ96RT1 1412 aa20.37■□□□□ 0.85
MARCKS-201ENST00000612661 RALBP1Q15311 655 aa20.37■□□□□ 0.85
MARCKS-201ENST00000612661 COG3Q96JB2 828 aa20.36■□□□□ 0.85
MARCKS-201ENST00000612661 GGNBP2Q9H3C7 697 aa20.36■□□□□ 0.85
MARCKS-201ENST00000612661 KIF7Q2M1P5 1343 aa20.35■□□□□ 0.85
MARCKS-201ENST00000612661 DHX29Q7Z478 1369 aaKnown RBP20.35■□□□□ 0.85
MARCKS-201ENST00000612661 RTF1Q92541 710 aaKnown RBP20.35■□□□□ 0.85
MARCKS-201ENST00000612661 STAC3Q96MF2 364 aa20.34■□□□□ 0.85
MARCKS-201ENST00000612661 SYCP2Q9BX26 1530 aa20.34■□□□□ 0.85
MARCKS-201ENST00000612661 NLRP13Q86W25 1043 aa20.33■□□□□ 0.85
MARCKS-201ENST00000612661 RRP7AQ9Y3A4 280 aaKnown RBP20.33■□□□□ 0.84
MARCKS-201ENST00000612661 MSH5O43196 834 aa20.33■□□□□ 0.84
MARCKS-201ENST00000612661 CCDC184Q52MB2 194 aa20.32■□□□□ 0.84
MARCKS-201ENST00000612661 ESCO1Q5FWF5 840 aa20.32■□□□□ 0.84
MARCKS-201ENST00000612661 SLC12A5Q9H2X9 1139 aa20.32■□□□□ 0.84
MARCKS-201ENST00000612661 CGNL1Q0VF96 1302 aa20.32■□□□□ 0.84
MARCKS-201ENST00000612661 PNNQ9H307 717 aaKnown RBP20.31■□□□□ 0.84
MARCKS-201ENST00000612661 CCDC7Q96M83 1385 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms