RNA–Protein interactions for RNA: ENST00000611716.4

PCSK6-214, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCSK6, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-214ENST00000611716 AMER1Q5JTC6 1135 aaPredicted RBP25.07■■□□□ 1.6
PCSK6-214ENST00000611716 MAPKBP1O60336 1514 aa25.07■■□□□ 1.6
PCSK6-214ENST00000611716 CFAP53Q96M91 514 aa25.06■■□□□ 1.6
PCSK6-214ENST00000611716 PRXQ9BXM0 1461 aa25.05■■□□□ 1.6
PCSK6-214ENST00000611716 CENPJQ9HC77 1338 aaPredicted RBP25.04■■□□□ 1.6
PCSK6-214ENST00000611716 PMFBP1Q8TBY8 1022 aa25.03■■□□□ 1.6
PCSK6-214ENST00000611716 APAF1O14727 1248 aa25.03■■□□□ 1.6
PCSK6-214ENST00000611716 MLECQ14165 292 aa25.02■■□□□ 1.6
PCSK6-214ENST00000611716 EFCAB2Q5VUJ9 269 aa25.02■■□□□ 1.6
PCSK6-214ENST00000611716 RRP7AQ9Y3A4 280 aaKnown RBP25.02■■□□□ 1.6
PCSK6-214ENST00000611716 U2SURPO15042 1029 aaKnown RBP25.02■■□□□ 1.6
PCSK6-214ENST00000611716 FAM13BQ9NYF5 915 aa25■■□□□ 1.59
PCSK6-214ENST00000611716 MAPK8IP3Q9UPT6 1336 aa25■■□□□ 1.59
PCSK6-214ENST00000611716 PTPRGP23470 1445 aa24.99■■□□□ 1.59
PCSK6-214ENST00000611716 ITPRIPQ8IWB1 547 aa24.99■■□□□ 1.59
PCSK6-214ENST00000611716 ZNF644Q9H582 1327 aaPredicted RBP24.98■■□□□ 1.59
PCSK6-214ENST00000611716 ADAMTS8Q9UP79 889 aa24.98■■□□□ 1.59
PCSK6-214ENST00000611716 C20orf194Q5TEA3 1177 aa24.98■■□□□ 1.59
PCSK6-214ENST00000611716 MRC2Q9UBG0 1479 aa24.96■■□□□ 1.59
PCSK6-214ENST00000611716 DDX11L8A8MPP1 907 aa24.95■■□□□ 1.59
PCSK6-214ENST00000611716 BRD4O60885 1362 aaPredicted RBP24.95■■□□□ 1.58
PCSK6-214ENST00000611716 ERICH3Q5RHP9 1530 aa24.95■■□□□ 1.58
PCSK6-214ENST00000611716 PANK1Q8TE04 598 aa24.95■■□□□ 1.58
PCSK6-214ENST00000611716 MORC1Q86VD1 984 aa24.94■■□□□ 1.58
PCSK6-214ENST00000611716 CHMP5Q9NZZ3 219 aa24.94■■□□□ 1.58
PCSK6-214ENST00000611716 MYOM3Q5VTT5 1437 aa24.93■■□□□ 1.58
PCSK6-214ENST00000611716 TRAK2O60296 914 aa24.93■■□□□ 1.58
PCSK6-214ENST00000611716 GGT6Q6P531 493 aa24.92■■□□□ 1.58
PCSK6-214ENST00000611716 DDX49Q9Y6V7 483 aaKnown RBP24.92■■□□□ 1.58
PCSK6-214ENST00000611716 CGNL1Q0VF96 1302 aa24.91■■□□□ 1.58
PCSK6-214ENST00000611716 CALD1Q05682 793 aaKnown RBP24.91■■□□□ 1.58
PCSK6-214ENST00000611716 APBB1O00213 710 aa24.9■■□□□ 1.58
PCSK6-214ENST00000611716 TIAM1Q13009 1591 aa24.9■■□□□ 1.58
PCSK6-214ENST00000611716 HFM1A2PYH4 1435 aa24.9■■□□□ 1.58
PCSK6-214ENST00000611716 MRE11P49959 708 aa24.88■■□□□ 1.57
PCSK6-214ENST00000611716 TOPBP1Q92547 1522 aa24.88■■□□□ 1.57
PCSK6-214ENST00000611716 GRIN2BQ13224 1484 aa24.87■■□□□ 1.57
PCSK6-214ENST00000611716 U2AF1L5P0DN76 240 aaPredicted RBP24.87■■□□□ 1.57
PCSK6-214ENST00000611716 U2AF1Q01081 240 aaKnown RBP eCLIP24.87■■□□□ 1.57
PCSK6-214ENST00000611716 SMC4Q9NTJ3 1288 aa24.87■■□□□ 1.57
PCSK6-214ENST00000611716 BCAR3O75815 825 aa24.86■■□□□ 1.57
PCSK6-214ENST00000611716 FOXD4L5Q5VV16 416 aaPredicted RBP24.86■■□□□ 1.57
PCSK6-214ENST00000611716 FOXD4L4Q8WXT5 416 aaPredicted RBP24.86■■□□□ 1.57
PCSK6-214ENST00000611716 RBM10P98175 930 aaKnown RBP24.85■■□□□ 1.57
PCSK6-214ENST00000611716 ANKRD30AQ9BXX3 1397 aa24.84■■□□□ 1.57
PCSK6-214ENST00000611716 E9PSI1 815 aa24.84■■□□□ 1.57
PCSK6-214ENST00000611716 CASC1Q6TDU7 716 aa24.84■■□□□ 1.57
PCSK6-214ENST00000611716 NAIPQ13075 1403 aa24.83■■□□□ 1.57
PCSK6-214ENST00000611716 NCOA2Q15596 1464 aa24.83■■□□□ 1.57
PCSK6-214ENST00000611716 A0A0U1RQG5 324 aaPredicted RBP24.83■■□□□ 1.57
PCSK6-214ENST00000611716 HNRNPMP52272 730 aaKnown RBP eCLIP24.83■■□□□ 1.571e-6■■■□□ 18.4
PCSK6-214ENST00000611716 C22orf23Q9BZE7 217 aa24.82■■□□□ 1.56
PCSK6-214ENST00000611716 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
PCSK6-214ENST00000611716 ZMYND15Q9H091 742 aa24.82■■□□□ 1.56
PCSK6-214ENST00000611716 UNC13AQ9UPW8 1703 aa24.82■■□□□ 1.56
PCSK6-214ENST00000611716 C14orf37Q86TY3 774 aa24.81■■□□□ 1.56
PCSK6-214ENST00000611716 CDK11BP21127 795 aaKnown RBP24.8■■□□□ 1.56
PCSK6-214ENST00000611716 KANK1Q14678 1352 aa24.79■■□□□ 1.56
PCSK6-214ENST00000611716 R3HCC1Q9Y3T6 440 aaKnown RBP24.79■■□□□ 1.56
PCSK6-214ENST00000611716 IFT140Q96RY7 1462 aa24.79■■□□□ 1.56
PCSK6-214ENST00000611716 WASHC2CQ9Y4E1 1318 aa24.78■■□□□ 1.56
PCSK6-214ENST00000611716 PTMSP20962 102 aa24.78■■□□□ 1.56
PCSK6-214ENST00000611716 NCOA1Q15788 1441 aa24.77■■□□□ 1.56
PCSK6-214ENST00000611716 ESPNB1AK53 854 aa24.77■■□□□ 1.56
PCSK6-214ENST00000611716 KIAA2012Q0VF49 1180 aa24.77■■□□□ 1.56
PCSK6-214ENST00000611716 CUX1P39880 1505 aa24.76■■□□□ 1.55
PCSK6-214ENST00000611716 CASKIN1Q8WXD9 1431 aa24.76■■□□□ 1.55
PCSK6-214ENST00000611716 MCM4P33991 863 aa24.75■■□□□ 1.55
PCSK6-214ENST00000611716 RRP9O43818 475 aaKnown RBP24.75■■□□□ 1.55
PCSK6-214ENST00000611716 CHAF1AQ13111 956 aaPredicted RBP24.74■■□□□ 1.55
PCSK6-214ENST00000611716 SKOR2Q2VWA4 1001 aaPredicted RBP24.73■■□□□ 1.55
PCSK6-214ENST00000611716 FOXD4L6Q3SYB3 417 aaPredicted RBP24.73■■□□□ 1.55
PCSK6-214ENST00000611716 FOXD4L3Q6VB84 417 aaPredicted RBP24.73■■□□□ 1.55
PCSK6-214ENST00000611716 SAFB2Q14151 953 aaKnown RBP eCLIP24.73■■□□□ 1.552e-6■□□□□ 9.5
PCSK6-214ENST00000611716 NBPF1Q3BBV0 1214 aa24.72■■□□□ 1.55
PCSK6-214ENST00000611716 NOL8Q76FK4 1167 aaKnown RBP24.72■■□□□ 1.55
PCSK6-214ENST00000611716 GRPEL1Q9HAV7 217 aa24.72■■□□□ 1.55
PCSK6-214ENST00000611716 SPAG9O60271 1321 aaKnown RBP24.72■■□□□ 1.55
PCSK6-214ENST00000611716 PDZRN3Q9UPQ7 1066 aa24.72■■□□□ 1.55
PCSK6-214ENST00000611716 KIF3BO15066 747 aa24.71■■□□□ 1.55
PCSK6-214ENST00000611716 NASPP49321 788 aaPredicted RBP24.7■■□□□ 1.55
PCSK6-214ENST00000611716 IPO8O15397 1037 aaKnown RBP24.7■■□□□ 1.54
PCSK6-214ENST00000611716 PLEKHG5O94827 1062 aa24.69■■□□□ 1.54
PCSK6-214ENST00000611716 LAMC3Q9Y6N6 1575 aa24.69■■□□□ 1.54
PCSK6-214ENST00000611716 ANKRD45Q5TZF3 282 aa24.68■■□□□ 1.54
PCSK6-214ENST00000611716 KIAA1211Q6ZU35 1233 aa24.68■■□□□ 1.54
PCSK6-214ENST00000611716 PANK2Q9BZ23 570 aa24.67■■□□□ 1.54
PCSK6-214ENST00000611716 LNPKQ9C0E8 428 aa24.67■■□□□ 1.54
PCSK6-214ENST00000611716 RSPH4AQ5TD94 716 aa24.67■■□□□ 1.54
PCSK6-214ENST00000611716 ZKSCAN2Q63HK3 967 aa24.67■■□□□ 1.54
PCSK6-214ENST00000611716 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.67■■□□□ 1.54
PCSK6-214ENST00000611716 TOP2BQ02880 1626 aa24.65■■□□□ 1.54
PCSK6-214ENST00000611716 DNMBPQ6XZF7 1577 aa24.64■■□□□ 1.54
PCSK6-214ENST00000611716 PPP2R1AP30153 589 aa24.63■■□□□ 1.53
PCSK6-214ENST00000611716 CHMP4BQ9H444 224 aaKnown RBP24.63■■□□□ 1.53
PCSK6-214ENST00000611716 TPM2P07951 284 aa24.63■■□□□ 1.53
PCSK6-214ENST00000611716 PODXL2Q9NZ53 605 aa24.62■■□□□ 1.53
PCSK6-214ENST00000611716 CCDC144AA2RUR9 1427 aa24.62■■□□□ 1.53
PCSK6-214ENST00000611716 MCTP1Q6DN14 999 aa24.62■■□□□ 1.53
PCSK6-214ENST00000611716 FYCO1Q9BQS8 1478 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms