RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 DDX10Q13206 875 aaKnown RBP25.9■■□□□ 1.74
SNAPC3-207ENST00000610884 POGZQ7Z3K3 1410 aa25.89■■□□□ 1.74
SNAPC3-207ENST00000610884 KIDINS220Q9ULH0 1771 aa25.89■■□□□ 1.74
SNAPC3-207ENST00000610884 DCAF11Q8TEB1 546 aa25.89■■□□□ 1.74
SNAPC3-207ENST00000610884 INO80Q9ULG1 1556 aaPredicted RBP25.88■■□□□ 1.73
SNAPC3-207ENST00000610884 TEX14Q8IWB6 1497 aa25.88■■□□□ 1.73
SNAPC3-207ENST00000610884 KDM5DQ9BY66 1539 aa25.87■■□□□ 1.73
SNAPC3-207ENST00000610884 PLA2R1Q13018 1463 aa25.87■■□□□ 1.73
SNAPC3-207ENST00000610884 DHX29Q7Z478 1369 aaKnown RBP25.87■■□□□ 1.73
SNAPC3-207ENST00000610884 MAP3K4Q9Y6R4 1608 aa25.84■■□□□ 1.73
SNAPC3-207ENST00000610884 UNC13BO14795 1591 aa25.84■■□□□ 1.73
SNAPC3-207ENST00000610884 DIP2BQ9P265 1576 aa25.84■■□□□ 1.73
SNAPC3-207ENST00000610884 HSPA5P11021 654 aaKnown RBP25.83■■□□□ 1.73
SNAPC3-207ENST00000610884 YEATS2Q9ULM3 1422 aa25.82■■□□□ 1.72
SNAPC3-207ENST00000610884 CCDC144AA2RUR9 1427 aa25.79■■□□□ 1.72
SNAPC3-207ENST00000610884 A2MP01023 1474 aa25.78■■□□□ 1.72
SNAPC3-207ENST00000610884 NEO1Q92859 1461 aa25.78■■□□□ 1.72
SNAPC3-207ENST00000610884 IQGAP3Q86VI3 1631 aa25.78■■□□□ 1.72
SNAPC3-207ENST00000610884 YTHDC1Q96MU7 727 aaKnown RBP25.76■■□□□ 1.71
SNAPC3-207ENST00000610884 CFAP65Q6ZU64 1925 aaKnown RBP25.74■■□□□ 1.71
SNAPC3-207ENST00000610884 KDM5CP41229 1560 aa25.74■■□□□ 1.71
SNAPC3-207ENST00000610884 MAGI2Q86UL8 1455 aa25.74■■□□□ 1.71
SNAPC3-207ENST00000610884 CFAP74Q9C0B2 1584 aa25.74■■□□□ 1.71
SNAPC3-207ENST00000610884 C11orf95C9JLR9 678 aaPredicted RBP25.74■■□□□ 1.71
SNAPC3-207ENST00000610884 ABCA6Q8N139 1617 aa25.73■■□□□ 1.71
SNAPC3-207ENST00000610884 MLH3Q9UHC1 1453 aa25.73■■□□□ 1.71
SNAPC3-207ENST00000610884 GLI2P10070 1586 aa25.72■■□□□ 1.71
SNAPC3-207ENST00000610884 FRMPD1Q5SYB0 1578 aa25.72■■□□□ 1.71
SNAPC3-207ENST00000610884 HECW2Q9P2P5 1572 aa25.72■■□□□ 1.71
SNAPC3-207ENST00000610884 EIF4G2P78344 907 aaKnown RBP eCLIP25.72■■□□□ 1.71
SNAPC3-207ENST00000610884 KANK1Q14678 1352 aa25.71■■□□□ 1.71
SNAPC3-207ENST00000610884 COL17A1Q9UMD9 1497 aaPredicted RBP25.71■■□□□ 1.71
SNAPC3-207ENST00000610884 SENP3Q9H4L4 574 aaPredicted RBP25.7■■□□□ 1.7
SNAPC3-207ENST00000610884 E9PCH4 1651 aa25.7■■□□□ 1.7
SNAPC3-207ENST00000610884 WASHC2CQ9Y4E1 1318 aa25.7■■□□□ 1.7
SNAPC3-207ENST00000610884 TRHP20396 242 aaPredicted RBP25.7■■□□□ 1.7
SNAPC3-207ENST00000610884 MLECQ14165 292 aa25.7■■□□□ 1.7
SNAPC3-207ENST00000610884 PPRC1Q5VV67 1664 aaKnown RBP25.69■■□□□ 1.7
SNAPC3-207ENST00000610884 MROH1Q8NDA8 1641 aa25.68■■□□□ 1.7
SNAPC3-207ENST00000610884 RICTORQ6R327 1708 aa25.67■■□□□ 1.7
SNAPC3-207ENST00000610884 NBPF1Q3BBV0 1214 aa25.67■■□□□ 1.7
SNAPC3-207ENST00000610884 UGGT1Q9NYU2 1555 aa25.67■■□□□ 1.7
SNAPC3-207ENST00000610884 KIF13AQ9H1H9 1805 aa25.66■■□□□ 1.7
SNAPC3-207ENST00000610884 POLR3GLQ9BT43 218 aa25.66■■□□□ 1.7
SNAPC3-207ENST00000610884 CHGAP10645 457 aaKnown RBP25.65■■□□□ 1.7
SNAPC3-207ENST00000610884 ATP10AO60312 1499 aa25.65■■□□□ 1.7
SNAPC3-207ENST00000610884 DEPDC5O75140 1603 aa25.63■■□□□ 1.69
SNAPC3-207ENST00000610884 WASHC2AQ641Q2 1341 aa25.63■■□□□ 1.69
SNAPC3-207ENST00000610884 CARD11Q9BXL7 1154 aa25.62■■□□□ 1.69
SNAPC3-207ENST00000610884 DIP2CQ9Y2E4 1556 aa25.62■■□□□ 1.69
SNAPC3-207ENST00000610884 CEP152O94986 1710 aa25.6■■□□□ 1.69
SNAPC3-207ENST00000610884 CNGB1Q14028 1251 aaPredicted RBP25.6■■□□□ 1.69
SNAPC3-207ENST00000610884 PRDM15P57071 1507 aaPredicted RBP25.58■■□□□ 1.69
SNAPC3-207ENST00000610884 NUTM2DQ5VT03 806 aaPredicted RBP25.58■■□□□ 1.69
SNAPC3-207ENST00000610884 VWDEQ8N2E2 1590 aa25.56■■□□□ 1.68
SNAPC3-207ENST00000610884 EIF2AK4Q9P2K8 1649 aaKnown RBP25.55■■□□□ 1.68
SNAPC3-207ENST00000610884 TET3O43151 1660 aa25.54■■□□□ 1.68
SNAPC3-207ENST00000610884 USP47Q96K76 1375 aa25.54■■□□□ 1.68
SNAPC3-207ENST00000610884 ST20-MTHFSA0A0A6YYL1 179 aa25.53■■□□□ 1.68
SNAPC3-207ENST00000610884 NPATQ14207 1427 aa25.53■■□□□ 1.68
SNAPC3-207ENST00000610884 FBXO31Q5XUX0 539 aaPredicted RBP25.53■■□□□ 1.68
SNAPC3-207ENST00000610884 CLTCL1P53675 1640 aa25.53■■□□□ 1.68
SNAPC3-207ENST00000610884 ROCK2O75116 1388 aaKnown RBP25.52■■□□□ 1.68
SNAPC3-207ENST00000610884 PTPRTO14522 1441 aa25.51■■□□□ 1.67
SNAPC3-207ENST00000610884 SPHKAPQ2M3C7 1700 aa25.5■■□□□ 1.67
SNAPC3-207ENST00000610884 SPATA31E1Q6ZUB1 1445 aa25.5■■□□□ 1.67
SNAPC3-207ENST00000610884 PRAG1Q86YV5 1406 aa25.48■■□□□ 1.67
SNAPC3-207ENST00000610884 EFCAB6Q5THR3 1501 aa25.48■■□□□ 1.67
SNAPC3-207ENST00000610884 UHRF1BP1Q6BDS2 1440 aa25.48■■□□□ 1.67
SNAPC3-207ENST00000610884 TRPM2O94759 1503 aa25.47■■□□□ 1.67
SNAPC3-207ENST00000610884 KIF7Q2M1P5 1343 aa25.47■■□□□ 1.67
SNAPC3-207ENST00000610884 SIGLEC1Q9BZZ2 1709 aa25.46■■□□□ 1.67
SNAPC3-207ENST00000610884 RNF17Q9BXT8 1623 aaKnown RBP25.46■■□□□ 1.67
SNAPC3-207ENST00000610884 ARID4BQ4LE39 1312 aaPredicted RBP25.46■■□□□ 1.67
SNAPC3-207ENST00000610884 ABCC3O15438 1527 aa25.45■■□□□ 1.67
SNAPC3-207ENST00000610884 PLPPR3Q6T4P5 718 aa25.45■■□□□ 1.66
SNAPC3-207ENST00000610884 ADGRF5Q8IZF2 1346 aa25.44■■□□□ 1.66
SNAPC3-207ENST00000610884 RALGAPBQ86X10 1494 aa25.42■■□□□ 1.66
SNAPC3-207ENST00000610884 CCDC7Q96M83 1385 aa25.41■■□□□ 1.66
SNAPC3-207ENST00000610884 IDI1Q13907 227 aa25.4■■□□□ 1.66
SNAPC3-207ENST00000610884 CFAP70Q5T0N1 1121 aa25.4■■□□□ 1.66
SNAPC3-207ENST00000610884 BCORL1Q5H9F3 1711 aa25.39■■□□□ 1.65
SNAPC3-207ENST00000610884 ZMYM4Q5VZL5 1548 aa25.38■■□□□ 1.65
SNAPC3-207ENST00000610884 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
SNAPC3-207ENST00000610884 LMTK2Q8IWU2 1503 aa25.36■■□□□ 1.65
SNAPC3-207ENST00000610884 ANP32CO43423 234 aa25.35■■□□□ 1.65
SNAPC3-207ENST00000610884 CAMSAP1Q5T5Y3 1602 aa25.34■■□□□ 1.65
SNAPC3-207ENST00000610884 TRPM1Q7Z4N2 1603 aa25.34■■□□□ 1.65
SNAPC3-207ENST00000610884 MROH2AA6NES4 1674 aa25.33■■□□□ 1.65
SNAPC3-207ENST00000610884 NOS1P29475 1434 aa25.3■■□□□ 1.64
SNAPC3-207ENST00000610884 TMEM132EQ6IEE7 984 aa25.3■■□□□ 1.64
SNAPC3-207ENST00000610884 CEBPAP49715 358 aaPredicted RBP25.27■■□□□ 1.64
SNAPC3-207ENST00000610884 SYNMO15061 1565 aa25.27■■□□□ 1.64
SNAPC3-207ENST00000610884 KIF1BO60333 1816 aa25.27■■□□□ 1.64
SNAPC3-207ENST00000610884 ESF1Q9H501 851 aaKnown RBP25.26■■□□□ 1.63
SNAPC3-207ENST00000610884 CCDC184Q52MB2 194 aa25.24■■□□□ 1.63
SNAPC3-207ENST00000610884 MADDQ8WXG6 1647 aa25.24■■□□□ 1.63
SNAPC3-207ENST00000610884 CNTLNQ9NXG0 1405 aa25.24■■□□□ 1.63
SNAPC3-207ENST00000610884 TESK2Q96S53 571 aa25.23■■□□□ 1.63
SNAPC3-207ENST00000610884 STAG3Q9UJ98 1225 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms