RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 NGDNQ8NEJ9 315 aaKnown RBP9.42□□□□□ -0.9
CSDE1-218ENST00000610726 KIF7Q2M1P5 1343 aa9.42□□□□□ -0.9
CSDE1-218ENST00000610726 PCF11O94913 1555 aaKnown RBP9.42□□□□□ -0.9
CSDE1-218ENST00000610726 NBPF8Q3BBV2 869 aa9.42□□□□□ -0.9
CSDE1-218ENST00000610726 RCAN3Q9UKA8 241 aa9.42□□□□□ -0.9
CSDE1-218ENST00000610726 BIVM-ERCC5R4GMW8 1640 aa9.42□□□□□ -0.9
CSDE1-218ENST00000610726 NBPF1Q3BBV0 1214 aa9.42□□□□□ -0.9
CSDE1-218ENST00000610726 HECW1Q76N89 1606 aa9.41□□□□□ -0.9
CSDE1-218ENST00000610726 CFAP70Q5T0N1 1121 aa9.41□□□□□ -0.9
CSDE1-218ENST00000610726 MYBBP1AQ9BQG0 1328 aaKnown RBP9.4□□□□□ -0.9
CSDE1-218ENST00000610726 DAPK1P53355 1430 aa9.4□□□□□ -0.9
CSDE1-218ENST00000610726 WASHC2AQ641Q2 1341 aa9.4□□□□□ -0.9
CSDE1-218ENST00000610726 NAIPQ13075 1403 aa9.4□□□□□ -0.9
CSDE1-218ENST00000610726 MAGI1Q96QZ7 1491 aaPredicted RBP9.4□□□□□ -0.9
CSDE1-218ENST00000610726 ARHGEF11O15085 1522 aa9.4□□□□□ -0.9
CSDE1-218ENST00000610726 CUL7Q14999 1698 aa9.4□□□□□ -0.91
CSDE1-218ENST00000610726 RRP7AQ9Y3A4 280 aaKnown RBP9.4□□□□□ -0.91
CSDE1-218ENST00000610726 CCDC7Q96M83 1385 aa9.39□□□□□ -0.91
CSDE1-218ENST00000610726 EVC2Q86UK5 1308 aa9.39□□□□□ -0.91
CSDE1-218ENST00000610726 RTF1Q92541 710 aaKnown RBP9.39□□□□□ -0.91
CSDE1-218ENST00000610726 GOLGA2Q08379 1002 aa9.38□□□□□ -0.91
CSDE1-218ENST00000610726 CENPJQ9HC77 1338 aaPredicted RBP9.38□□□□□ -0.91
CSDE1-218ENST00000610726 LTV1Q96GA3 475 aaPredicted RBP9.37□□□□□ -0.91
CSDE1-218ENST00000610726 KIAA1107Q9UPP5 1409 aa9.37□□□□□ -0.91
CSDE1-218ENST00000610726 SUPT6HQ7KZ85 1726 aaKnown RBP9.37□□□□□ -0.91
CSDE1-218ENST00000610726 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.36□□□□□ -0.91
CSDE1-218ENST00000610726 MS4A1P11836 297 aa9.36□□□□□ -0.91
CSDE1-218ENST00000610726 CLUAP1Q96AJ1 413 aa9.36□□□□□ -0.91
CSDE1-218ENST00000610726 CGNL1Q0VF96 1302 aa9.36□□□□□ -0.91
CSDE1-218ENST00000610726 CSB-PGBD3P0DP91 1061 aa9.35□□□□□ -0.91
CSDE1-218ENST00000610726 AMPHP49418 695 aa9.35□□□□□ -0.91
CSDE1-218ENST00000610726 STAC3Q96MF2 364 aa9.35□□□□□ -0.91
CSDE1-218ENST00000610726 APAF1O14727 1248 aa9.34□□□□□ -0.91
CSDE1-218ENST00000610726 CABP2Q9NPB3 220 aa9.34□□□□□ -0.91
CSDE1-218ENST00000610726 ABCC5O15440 1437 aa9.34□□□□□ -0.91
CSDE1-218ENST00000610726 PLEKHH2Q8IVE3 1493 aa9.34□□□□□ -0.91
CSDE1-218ENST00000610726 COG3Q96JB2 828 aa9.32□□□□□ -0.92
CSDE1-218ENST00000610726 PDE3BQ13370 1112 aa9.32□□□□□ -0.92
CSDE1-218ENST00000610726 APBB1O00213 710 aa9.32□□□□□ -0.92
CSDE1-218ENST00000610726 ELL2O00472 640 aaPredicted RBP9.32□□□□□ -0.92
CSDE1-218ENST00000610726 BCL2L13Q9BXK5 485 aa9.32□□□□□ -0.92
CSDE1-218ENST00000610726 GGNBP2Q9H3C7 697 aa9.32□□□□□ -0.92
CSDE1-218ENST00000610726 SMC4Q9NTJ3 1288 aa9.32□□□□□ -0.92
CSDE1-218ENST00000610726 PLIN1O60240 522 aa9.32□□□□□ -0.92
CSDE1-218ENST00000610726 CHMP4BQ9H444 224 aaKnown RBP9.32□□□□□ -0.92
CSDE1-218ENST00000610726 ROCK1Q13464 1354 aa9.31□□□□□ -0.92
CSDE1-218ENST00000610726 IPO8O15397 1037 aaKnown RBP9.31□□□□□ -0.92
CSDE1-218ENST00000610726 ITPRIPQ8IWB1 547 aa9.31□□□□□ -0.92
CSDE1-218ENST00000610726 MAP3K1Q13233 1512 aa9.31□□□□□ -0.92
CSDE1-218ENST00000610726 CAMSAP2Q08AD1 1489 aa9.31□□□□□ -0.92
CSDE1-218ENST00000610726 CALD1Q05682 793 aaKnown RBP9.31□□□□□ -0.92
CSDE1-218ENST00000610726 OS9Q13438 667 aaPredicted RBP9.31□□□□□ -0.92
CSDE1-218ENST00000610726 BECN1Q14457 450 aa9.31□□□□□ -0.92
CSDE1-218ENST00000610726 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.31□□□□□ -0.92
CSDE1-218ENST00000610726 CNTLNQ9NXG0 1405 aa9.3□□□□□ -0.92
CSDE1-218ENST00000610726 ZBED9Q6R2W3 1325 aa9.3□□□□□ -0.92
CSDE1-218ENST00000610726 DDRGK1Q96HY6 314 aa9.3□□□□□ -0.92
CSDE1-218ENST00000610726 NCOA1Q15788 1441 aa9.3□□□□□ -0.92
CSDE1-218ENST00000610726 CCDC141Q6ZP82 1450 aa9.3□□□□□ -0.92
CSDE1-218ENST00000610726 CD109Q6YHK3 1445 aa9.3□□□□□ -0.92
CSDE1-218ENST00000610726 WDR97A6NE52 1622 aa9.29□□□□□ -0.92
CSDE1-218ENST00000610726 SLC12A5Q9H2X9 1139 aa9.29□□□□□ -0.92
CSDE1-218ENST00000610726 PTPN23Q9H3S7 1636 aa9.29□□□□□ -0.92
CSDE1-218ENST00000610726 TXNDC2Q86VQ3 553 aa9.29□□□□□ -0.92
CSDE1-218ENST00000610726 THOC2Q8NI27 1593 aaKnown RBP9.29□□□□□ -0.92
CSDE1-218ENST00000610726 ERICH6BQ5W0A0 696 aa9.28□□□□□ -0.92
CSDE1-218ENST00000610726 PRAM1Q96QH2 718 aa9.28□□□□□ -0.92
CSDE1-218ENST00000610726 ANKRD30BQ9BXX2 1392 aa9.28□□□□□ -0.92
CSDE1-218ENST00000610726 ZNF330Q9Y3S2 320 aaPredicted RBP9.28□□□□□ -0.92
CSDE1-218ENST00000610726 SLC52A1Q9NWF4 448 aa9.28□□□□□ -0.92
CSDE1-218ENST00000610726 RBM19Q9Y4C8 960 aaKnown RBP9.27□□□□□ -0.92
CSDE1-218ENST00000610726 DIAPH1O60610 1272 aaKnown RBP9.27□□□□□ -0.93
CSDE1-218ENST00000610726 PTPRKQ15262 1439 aa9.27□□□□□ -0.93
CSDE1-218ENST00000610726 AKNAQ7Z591 1439 aa9.27□□□□□ -0.93
CSDE1-218ENST00000610726 CASC1Q6TDU7 716 aa9.27□□□□□ -0.93
CSDE1-218ENST00000610726 ADAMTS8Q9UP79 889 aa9.27□□□□□ -0.93
CSDE1-218ENST00000610726 NUTM2GQ5VZR2 741 aa9.26□□□□□ -0.93
CSDE1-218ENST00000610726 SLC4A10Q6U841 1118 aa9.26□□□□□ -0.93
CSDE1-218ENST00000610726 STK31Q9BXU1 1019 aa9.26□□□□□ -0.93
CSDE1-218ENST00000610726 ATP10BO94823 1461 aa9.26□□□□□ -0.93
CSDE1-218ENST00000610726 MTHFSP49914 203 aa9.26□□□□□ -0.93
CSDE1-218ENST00000610726 CCDC184Q52MB2 194 aa9.26□□□□□ -0.93
CSDE1-218ENST00000610726 SLC26A8Q96RN1 970 aa9.26□□□□□ -0.93
CSDE1-218ENST00000610726 C11orf95C9JLR9 678 aaPredicted RBP9.25□□□□□ -0.93
CSDE1-218ENST00000610726 GPATCH8Q9UKJ3 1502 aaKnown RBP9.25□□□□□ -0.93
CSDE1-218ENST00000610726 NPHP1O15259 732 aa9.25□□□□□ -0.93
CSDE1-218ENST00000610726 HMOX1P09601 288 aa9.25□□□□□ -0.93
CSDE1-218ENST00000610726 ADGRL1O94910 1474 aa9.25□□□□□ -0.93
CSDE1-218ENST00000610726 PSME1Q06323 249 aa9.25□□□□□ -0.93
CSDE1-218ENST00000610726 LMOD3Q0VAK6 560 aa9.25□□□□□ -0.93
CSDE1-218ENST00000610726 EXOC6Q8TAG9 804 aa9.25□□□□□ -0.93
CSDE1-218ENST00000610726 NUP153P49790 1475 aaKnown RBP9.25□□□□□ -0.93
CSDE1-218ENST00000610726 E9PSI1 815 aa9.24□□□□□ -0.93
CSDE1-218ENST00000610726 TCERG1O14776 1098 aaKnown RBP9.24□□□□□ -0.93
CSDE1-218ENST00000610726 ANP32BQ92688 251 aaKnown RBP9.24□□□□□ -0.93
CSDE1-218ENST00000610726 RWDD1Q9H446 243 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-218ENST00000610726 KIF14Q15058 1648 aa9.24□□□□□ -0.93
CSDE1-218ENST00000610726 ERBINQ96RT1 1412 aa9.24□□□□□ -0.93
CSDE1-218ENST00000610726 RIPK4P57078 832 aa9.24□□□□□ -0.93
CSDE1-218ENST00000610726 CCDC9Q9Y3X0 531 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms