RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 RILPL2Q969X0 211 aa16.2■□□□□ 0.18
USP6NL-205ENST00000609104 TOMM22Q9NS69 142 aa16.2■□□□□ 0.18
USP6NL-205ENST00000609104 CCDC9Q9Y3X0 531 aaKnown RBP16.2■□□□□ 0.18
USP6NL-205ENST00000609104 G3V3G9 751 aa16.2■□□□□ 0.18
USP6NL-205ENST00000609104 DCAF8Q5TAQ9 597 aa16.2■□□□□ 0.18
USP6NL-205ENST00000609104 MARCH6O60337 910 aa16.2■□□□□ 0.18
USP6NL-205ENST00000609104 TSR1Q2NL82 804 aaKnown RBP16.19■□□□□ 0.18
USP6NL-205ENST00000609104 MPHOSPH9Q99550 1183 aa16.18■□□□□ 0.18
USP6NL-205ENST00000609104 RSPH6AQ9H0K4 717 aa16.18■□□□□ 0.18
USP6NL-205ENST00000609104 DDX49Q9Y6V7 483 aaKnown RBP16.18■□□□□ 0.18
USP6NL-205ENST00000609104 FAM184AQ8NB25 1140 aa16.17■□□□□ 0.18
USP6NL-205ENST00000609104 PATL2C9JE40 543 aaKnown RBP16.17■□□□□ 0.18
USP6NL-205ENST00000609104 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
USP6NL-205ENST00000609104 ZNF592Q92610 1267 aa16.17■□□□□ 0.18
USP6NL-205ENST00000609104 ZNF771Q7L3S4 317 aaPredicted RBP16.16■□□□□ 0.18
USP6NL-205ENST00000609104 FRAT2O75474 233 aaPredicted RBP16.16■□□□□ 0.18
USP6NL-205ENST00000609104 ANKRD45Q5TZF3 282 aa16.16■□□□□ 0.18
USP6NL-205ENST00000609104 VSIG10Q8N0Z9 540 aa16.16■□□□□ 0.18
USP6NL-205ENST00000609104 RAB3GAP2Q9H2M9 1393 aa16.15■□□□□ 0.18
USP6NL-205ENST00000609104 CHMP4AQ9BY43 222 aa16.15■□□□□ 0.18
USP6NL-205ENST00000609104 KIF3AQ9Y496 699 aa16.15■□□□□ 0.18
USP6NL-205ENST00000609104 GSE1Q14687 1217 aa16.14■□□□□ 0.17
USP6NL-205ENST00000609104 HDAC5Q9UQL6 1122 aa16.14■□□□□ 0.17
USP6NL-205ENST00000609104 BECN2A8MW95 431 aa16.13■□□□□ 0.17
USP6NL-205ENST00000609104 WWC1Q8IX03 1113 aa16.13■□□□□ 0.17
USP6NL-205ENST00000609104 LTV1Q96GA3 475 aaPredicted RBP16.13■□□□□ 0.17
USP6NL-205ENST00000609104 RRP7AQ9Y3A4 280 aaKnown RBP16.13■□□□□ 0.17
USP6NL-205ENST00000609104 EIF3AQ14152 1382 aaKnown RBP16.13■□□□□ 0.17
USP6NL-205ENST00000609104 PLIN1O60240 522 aa16.12■□□□□ 0.17
USP6NL-205ENST00000609104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.11■□□□□ 0.179e-9■□□□□ 9.6
USP6NL-205ENST00000609104 MCTP1Q6DN14 999 aa16.11■□□□□ 0.17
USP6NL-205ENST00000609104 NUP155O75694 1391 aa16.11■□□□□ 0.17
USP6NL-205ENST00000609104 BCL2L13Q9BXK5 485 aa16.11■□□□□ 0.17
USP6NL-205ENST00000609104 CENPQQ7L2Z9 268 aaPredicted RBP16.1■□□□□ 0.17
USP6NL-205ENST00000609104 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
USP6NL-205ENST00000609104 TPM2P07951 284 aa16.1■□□□□ 0.17
USP6NL-205ENST00000609104 AMPHP49418 695 aa16.1■□□□□ 0.17
USP6NL-205ENST00000609104 GPS2Q13227 327 aa16.1■□□□□ 0.17
USP6NL-205ENST00000609104 FAM161AQ3B820 660 aa16.1■□□□□ 0.17
USP6NL-205ENST00000609104 TPM1P09493 284 aa16.1■□□□□ 0.17
USP6NL-205ENST00000609104 NUTM2DQ5VT03 806 aaPredicted RBP16.1■□□□□ 0.17
USP6NL-205ENST00000609104 CCDC70Q6NSX1 233 aa16.1■□□□□ 0.17
USP6NL-205ENST00000609104 FBXO3Q9UK99 471 aa16.1■□□□□ 0.17
USP6NL-205ENST00000609104 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.1■□□□□ 0.17
USP6NL-205ENST00000609104 SKOR2Q2VWA4 1001 aaPredicted RBP16.1■□□□□ 0.17
USP6NL-205ENST00000609104 TERF2IPQ9NYB0 399 aa16.1■□□□□ 0.17
USP6NL-205ENST00000609104 PDE4AP27815 886 aa16.09■□□□□ 0.17
USP6NL-205ENST00000609104 AKAP17AQ02040 695 aaKnown RBP16.09■□□□□ 0.17
USP6NL-205ENST00000609104 CUX2O14529 1486 aa16.09■□□□□ 0.17
USP6NL-205ENST00000609104 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
USP6NL-205ENST00000609104 LMOD3Q0VAK6 560 aa16.09■□□□□ 0.17
USP6NL-205ENST00000609104 PCMTD1Q96MG8 357 aaPredicted RBP16.08■□□□□ 0.16
USP6NL-205ENST00000609104 NLRP13Q86W25 1043 aa16.07■□□□□ 0.16
USP6NL-205ENST00000609104 PDE3BQ13370 1112 aa16.07■□□□□ 0.16
USP6NL-205ENST00000609104 CRBNQ96SW2 442 aa16.07■□□□□ 0.16
USP6NL-205ENST00000609104 ELL2O00472 640 aaPredicted RBP16.07■□□□□ 0.16
USP6NL-205ENST00000609104 ATP6V1DQ9Y5K8 247 aa16.07■□□□□ 0.16
USP6NL-205ENST00000609104 SOGA1O94964 1423 aa16.07■□□□□ 0.16
USP6NL-205ENST00000609104 NUTM2FA1L443 756 aa16.06■□□□□ 0.16
USP6NL-205ENST00000609104 NGDNQ8NEJ9 315 aaKnown RBP16.06■□□□□ 0.16
USP6NL-205ENST00000609104 GTF2E1P29083 439 aaPredicted RBP16.06■□□□□ 0.16
USP6NL-205ENST00000609104 FAM13BQ9NYF5 915 aa16.05■□□□□ 0.16
USP6NL-205ENST00000609104 KIF15Q9NS87 1388 aa16.03■□□□□ 0.16
USP6NL-205ENST00000609104 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
USP6NL-205ENST00000609104 BCL11BQ9C0K0 894 aaPredicted RBP16.03■□□□□ 0.16
USP6NL-205ENST00000609104 PHLDB1Q86UU1 1377 aa16.03■□□□□ 0.16
USP6NL-205ENST00000609104 TEX35Q5T0J7 233 aa16.02■□□□□ 0.16
USP6NL-205ENST00000609104 SYNE3Q6ZMZ3 975 aa16.02■□□□□ 0.16
USP6NL-205ENST00000609104 FBXW7Q969H0 707 aa16.02■□□□□ 0.16
USP6NL-205ENST00000609104 ABCC8Q09428 1581 aa16.02■□□□□ 0.16
USP6NL-205ENST00000609104 VPS8Q8N3P4 1428 aa16.02■□□□□ 0.16
USP6NL-205ENST00000609104 L3MBTL2Q969R5 705 aa16.02■□□□□ 0.16
USP6NL-205ENST00000609104 EXOC6Q8TAG9 804 aa16.02■□□□□ 0.15
USP6NL-205ENST00000609104 NGEFQ8N5V2 710 aa16.02■□□□□ 0.15
USP6NL-205ENST00000609104 TRIM29Q14134 588 aa16■□□□□ 0.15
USP6NL-205ENST00000609104 TRAK1Q9UPV9 953 aa16■□□□□ 0.15
USP6NL-205ENST00000609104 RAD21O60216 631 aa16■□□□□ 0.15
USP6NL-205ENST00000609104 RRP1P56182 461 aaKnown RBP16■□□□□ 0.15
USP6NL-205ENST00000609104 ANKRD30AQ9BXX3 1397 aa16■□□□□ 0.15
USP6NL-205ENST00000609104 DIAPH3Q9NSV4 1193 aa16■□□□□ 0.15
USP6NL-205ENST00000609104 MYBBP1AQ9BQG0 1328 aaKnown RBP16■□□□□ 0.15
USP6NL-205ENST00000609104 PANK3Q9H999 370 aa15.99■□□□□ 0.15
USP6NL-205ENST00000609104 ANO2Q9NQ90 1003 aa15.99■□□□□ 0.15
USP6NL-205ENST00000609104 COG6Q9Y2V7 657 aa15.99■□□□□ 0.15
USP6NL-205ENST00000609104 HNRNPMP52272 730 aaKnown RBP eCLIP15.99■□□□□ 0.153e-7■■■■■ 27.8
USP6NL-205ENST00000609104 ZKSCAN2Q63HK3 967 aa15.98■□□□□ 0.15
USP6NL-205ENST00000609104 CHMP4CQ96CF2 233 aa15.98■□□□□ 0.15
USP6NL-205ENST00000609104 TCEAL9Q9UHQ7 104 aa15.98■□□□□ 0.15
USP6NL-205ENST00000609104 KIF3BO15066 747 aa15.97■□□□□ 0.15
USP6NL-205ENST00000609104 IPO7O95373 1038 aaKnown RBP15.97■□□□□ 0.15
USP6NL-205ENST00000609104 APPP05067 770 aa15.97■□□□□ 0.15
USP6NL-205ENST00000609104 BICD2Q8TD16 824 aa15.97■□□□□ 0.15
USP6NL-205ENST00000609104 NECTIN2Q92692 538 aa15.96■□□□□ 0.15
USP6NL-205ENST00000609104 FOSBP53539 338 aa15.96■□□□□ 0.15
USP6NL-205ENST00000609104 C1orf141Q5JVX7 400 aa15.96■□□□□ 0.15
USP6NL-205ENST00000609104 FMN1Q68DA7 1419 aa15.96■□□□□ 0.15
USP6NL-205ENST00000609104 ANKRD20A12PQ8NF67 263 aa15.96■□□□□ 0.14
USP6NL-205ENST00000609104 E9PSI1 815 aa15.95■□□□□ 0.14
USP6NL-205ENST00000609104 CPLX2Q6PUV4 134 aaKnown RBP15.95■□□□□ 0.14
USP6NL-205ENST00000609104 SASS6Q6UVJ0 657 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms