RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 RBM33Q96EV2 1170 aaKnown RBP14.33□□□□□ -0.12
LINC00458-206ENST00000607494 FBXW7Q969H0 707 aa14.32□□□□□ -0.12
LINC00458-206ENST00000607494 PDIA6Q15084 440 aa14.31□□□□□ -0.12
LINC00458-206ENST00000607494 PTPN5P54829 565 aa14.29□□□□□ -0.12
LINC00458-206ENST00000607494 E2F4Q16254 413 aa14.29□□□□□ -0.12
LINC00458-206ENST00000607494 MRPL50Q8N5N7 158 aaKnown RBP14.28□□□□□ -0.12
LINC00458-206ENST00000607494 EPAS1Q99814 870 aa14.28□□□□□ -0.12
LINC00458-206ENST00000607494 NBR1Q14596 966 aa14.27□□□□□ -0.13
LINC00458-206ENST00000607494 C6orf132Q5T0Z8 1188 aa14.27□□□□□ -0.13
LINC00458-206ENST00000607494 PLA2G2EQ9NZK7 142 aa14.27□□□□□ -0.13
LINC00458-206ENST00000607494 WDR70Q9NW82 654 aa14.25□□□□□ -0.13
LINC00458-206ENST00000607494 TSR1Q2NL82 804 aaKnown RBP14.24□□□□□ -0.13
LINC00458-206ENST00000607494 THSD4Q6ZMP0 1018 aa14.24□□□□□ -0.13
LINC00458-206ENST00000607494 WNT2BQ93097 391 aa14.24□□□□□ -0.13
LINC00458-206ENST00000607494 NBPF3Q9H094 633 aa14.24□□□□□ -0.13
LINC00458-206ENST00000607494 GOLGA8CPA6NN73 597 aa14.23□□□□□ -0.13
LINC00458-206ENST00000607494 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
LINC00458-206ENST00000607494 PRIM1P49642 420 aaKnown RBP14.22□□□□□ -0.13
LINC00458-206ENST00000607494 RABGEF1Q9UJ41 708 aa14.22□□□□□ -0.13
LINC00458-206ENST00000607494 EN1Q05925 392 aaPredicted RBP14.2□□□□□ -0.14
LINC00458-206ENST00000607494 KIAA1468Q9P260 1216 aa14.2□□□□□ -0.14
LINC00458-206ENST00000607494 SPDYE16A6NNV3 312 aaPredicted RBP14.19□□□□□ -0.14
LINC00458-206ENST00000607494 MAP3K7O43318 606 aa14.19□□□□□ -0.14
LINC00458-206ENST00000607494 SEPT9Q9UHD8 586 aaPredicted RBP14.18□□□□□ -0.14
LINC00458-206ENST00000607494 GRXCR2A6NFK2 248 aa14.17□□□□□ -0.14
LINC00458-206ENST00000607494 ARIH1Q9Y4X5 557 aaPredicted RBP14.16□□□□□ -0.14
LINC00458-206ENST00000607494 TRIM6-TRIM34B2RNG4 842 aa14.15□□□□□ -0.14
LINC00458-206ENST00000607494 BCAMP50895 628 aa14.13□□□□□ -0.15
LINC00458-206ENST00000607494 CDHR5Q9HBB8 845 aa14.11□□□□□ -0.15
LINC00458-206ENST00000607494 TSKSQ9UJT2 592 aa14.11□□□□□ -0.15
LINC00458-206ENST00000607494 ANKK1Q8NFD2 765 aa14.1□□□□□ -0.15
LINC00458-206ENST00000607494 ZFRQ96KR1 1074 aaKnown RBP14.09□□□□□ -0.15
LINC00458-206ENST00000607494 OSBPP22059 807 aa14.07□□□□□ -0.16
LINC00458-206ENST00000607494 LAPTM4BQ86VI4 370 aa14.07□□□□□ -0.16
LINC00458-206ENST00000607494 FAM198AQ9UFP1 575 aa14.07□□□□□ -0.16
LINC00458-206ENST00000607494 ONECUT3O60422 494 aaPredicted RBP14.06□□□□□ -0.16
LINC00458-206ENST00000607494 KCNV2Q8TDN2 545 aa14.05□□□□□ -0.16
LINC00458-206ENST00000607494 C3orf80F5H4A9 247 aa14.04□□□□□ -0.16
LINC00458-206ENST00000607494 SOWAHBA6NEL2 793 aa14.03□□□□□ -0.16
LINC00458-206ENST00000607494 SMAPO00193 183 aa14.03□□□□□ -0.16
LINC00458-206ENST00000607494 CDCA7LQ96GN5 454 aa14.03□□□□□ -0.16
LINC00458-206ENST00000607494 FAM98CQ17RN3 349 aaKnown RBP14.02□□□□□ -0.17
LINC00458-206ENST00000607494 WBP1LQ9NX94 342 aa14□□□□□ -0.17
LINC00458-206ENST00000607494 MLLT3P42568 568 aaPredicted RBP13.99□□□□□ -0.17
LINC00458-206ENST00000607494 PRSS12P56730 875 aa13.99□□□□□ -0.17
LINC00458-206ENST00000607494 PACS2Q86VP3 889 aa13.98□□□□□ -0.17
LINC00458-206ENST00000607494 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.95□□□□□ -0.18
LINC00458-206ENST00000607494 ARHGEF1Q92888 912 aaKnown RBP13.94□□□□□ -0.18
LINC00458-206ENST00000607494 LRCH3Q96II8 777 aa13.94□□□□□ -0.18
LINC00458-206ENST00000607494 HPS5Q9UPZ3 1129 aa13.94□□□□□ -0.18
LINC00458-206ENST00000607494 PNMA3Q9UL41 463 aa13.93□□□□□ -0.18
LINC00458-206ENST00000607494 CERKQ8TCT0 537 aa13.92□□□□□ -0.18
LINC00458-206ENST00000607494 NPDC1Q9NQX5 325 aaPredicted RBP13.92□□□□□ -0.18
LINC00458-206ENST00000607494 TATDN2Q93075 761 aa13.91□□□□□ -0.18
LINC00458-206ENST00000607494 PADI6Q6TGC4 694 aa13.9□□□□□ -0.18
LINC00458-206ENST00000607494 SAMD7Q7Z3H4 446 aa13.9□□□□□ -0.18
LINC00458-206ENST00000607494 NBPF26B4DH59 902 aa13.89□□□□□ -0.19
LINC00458-206ENST00000607494 IFFO2Q5TF58 517 aa13.89□□□□□ -0.19
LINC00458-206ENST00000607494 NUDT18Q6ZVK8 323 aa13.88□□□□□ -0.19
LINC00458-206ENST00000607494 TSR3Q9UJK0 312 aaKnown RBP13.88□□□□□ -0.19
LINC00458-206ENST00000607494 A0A0G2JS52 829 aa13.87□□□□□ -0.19
LINC00458-206ENST00000607494 PLCB2Q00722 1185 aa13.87□□□□□ -0.19
LINC00458-206ENST00000607494 ITGBL1O95965 494 aaPredicted RBP13.85□□□□□ -0.19
LINC00458-206ENST00000607494 RBM27Q9P2N5 1060 aaKnown RBP13.84□□□□□ -0.19
LINC00458-206ENST00000607494 TTC13Q8NBP0 860 aa13.83□□□□□ -0.2
LINC00458-206ENST00000607494 NYAP1Q6ZVC0 841 aa13.82□□□□□ -0.2
LINC00458-206ENST00000607494 SEMA3EO15041 775 aa13.81□□□□□ -0.2
LINC00458-206ENST00000607494 RNF40O75150 1001 aa13.81□□□□□ -0.2
LINC00458-206ENST00000607494 PPP4CP60510 307 aa13.8□□□□□ -0.2
LINC00458-206ENST00000607494 P3H3Q8IVL6 736 aa13.78□□□□□ -0.2
LINC00458-206ENST00000607494 KCNC4Q03721 635 aa13.76□□□□□ -0.21
LINC00458-206ENST00000607494 PTGDRQ13258 359 aa13.76□□□□□ -0.21
LINC00458-206ENST00000607494 SWT1Q5T5J6 900 aaKnown RBP13.75□□□□□ -0.21
LINC00458-206ENST00000607494 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
LINC00458-206ENST00000607494 FAM161AQ3B820 660 aa13.72□□□□□ -0.21
LINC00458-206ENST00000607494 EYA1Q99502 592 aa13.72□□□□□ -0.21
LINC00458-206ENST00000607494 APLP1P51693 650 aa13.71□□□□□ -0.21
LINC00458-206ENST00000607494 HAP1P54257 671 aaPredicted RBP13.7□□□□□ -0.22
LINC00458-206ENST00000607494 TJAP1Q5JTD0 557 aa13.69□□□□□ -0.22
LINC00458-206ENST00000607494 MTRQ99707 1265 aa13.69□□□□□ -0.22
LINC00458-206ENST00000607494 RGS20O76081 388 aa13.67□□□□□ -0.22
LINC00458-206ENST00000607494 HDGFP51858 240 aaKnown RBP13.67□□□□□ -0.22
LINC00458-206ENST00000607494 ZNF516Q92618 1163 aa13.65□□□□□ -0.22
LINC00458-206ENST00000607494 ADGRG1Q9Y653 693 aa13.65□□□□□ -0.22
LINC00458-206ENST00000607494 RBM26Q5T8P6 1007 aaKnown RBP13.64□□□□□ -0.23
LINC00458-206ENST00000607494 TESPA1A2RU30 521 aaPredicted RBP13.62□□□□□ -0.23
LINC00458-206ENST00000607494 SLF2Q8IX21 1173 aa13.62□□□□□ -0.23
LINC00458-206ENST00000607494 KDM2AQ9Y2K7 1162 aa13.62□□□□□ -0.23
LINC00458-206ENST00000607494 FCHSD2O94868 740 aa13.6□□□□□ -0.23
LINC00458-206ENST00000607494 IL21Q9HBE4 155 aa13.6□□□□□ -0.23
LINC00458-206ENST00000607494 COPS2P61201 443 aa13.59□□□□□ -0.23
LINC00458-206ENST00000607494 DNAJB2P25686 324 aa13.58□□□□□ -0.24
LINC00458-206ENST00000607494 RBM46Q8TBY0 533 aaKnown RBP13.58□□□□□ -0.24
LINC00458-206ENST00000607494 IRX2Q9BZI1 471 aaPredicted RBP13.58□□□□□ -0.24
LINC00458-206ENST00000607494 RCCD1A6NED2 376 aa13.57□□□□□ -0.24
LINC00458-206ENST00000607494 NKX2-3Q8TAU0 364 aa13.57□□□□□ -0.24
LINC00458-206ENST00000607494 TMEM134Q9H6X4 195 aa13.56□□□□□ -0.24
LINC00458-206ENST00000607494 FECHP22830 423 aa13.54□□□□□ -0.24
LINC00458-206ENST00000607494 GPR37O15354 613 aa13.53□□□□□ -0.24
LINC00458-206ENST00000607494 PPP1R18Q6NYC8 613 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms