RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 AXIN2Q9Y2T1 843 aa9.93□□□□□ -0.82
LINC00397-202ENST00000606785 C2orf72A6NCS6 295 aa9.92□□□□□ -0.82
LINC00397-202ENST00000606785 FOXK1P85037 733 aa9.92□□□□□ -0.82
LINC00397-202ENST00000606785 PCDHGA4Q9Y5G9 962 aa9.92□□□□□ -0.82
LINC00397-202ENST00000606785 ADGRD1Q6QNK2 874 aa9.91□□□□□ -0.82
LINC00397-202ENST00000606785 HOMEZQ8IX15 550 aa9.91□□□□□ -0.82
LINC00397-202ENST00000606785 TMC2Q8TDI7 906 aa9.91□□□□□ -0.82
LINC00397-202ENST00000606785 TRIM66O15016 1216 aa9.9□□□□□ -0.82
LINC00397-202ENST00000606785 KDM4CQ9H3R0 1056 aa9.9□□□□□ -0.82
LINC00397-202ENST00000606785 PSDA5PKW4 1024 aaPredicted RBP9.89□□□□□ -0.83
LINC00397-202ENST00000606785 ARHGAP33O14559 1287 aa9.89□□□□□ -0.83
LINC00397-202ENST00000606785 PDE4DQ08499 809 aa9.88□□□□□ -0.83
LINC00397-202ENST00000606785 TK2O00142 265 aa9.87□□□□□ -0.83
LINC00397-202ENST00000606785 IL27Q8NEV9 243 aa9.87□□□□□ -0.83
LINC00397-202ENST00000606785 GPR37O15354 613 aa9.86□□□□□ -0.83
LINC00397-202ENST00000606785 SUPT5HO00267 1087 aaKnown RBP9.85□□□□□ -0.83
LINC00397-202ENST00000606785 PLPP6Q8IY26 295 aa9.85□□□□□ -0.83
LINC00397-202ENST00000606785 HRO43593 1189 aa9.84□□□□□ -0.83
LINC00397-202ENST00000606785 MINK1Q8N4C8 1332 aaPredicted RBP9.82□□□□□ -0.84
LINC00397-202ENST00000606785 MAP3K9P80192 1104 aa9.81□□□□□ -0.84
LINC00397-202ENST00000606785 GRXCR2A6NFK2 248 aa9.8□□□□□ -0.84
LINC00397-202ENST00000606785 KDM4FA0A1W2PPD8 638 aa9.79□□□□□ -0.84
LINC00397-202ENST00000606785 MAP2K5Q13163 448 aa9.79□□□□□ -0.84
LINC00397-202ENST00000606785 NUTM2FA1L443 756 aa9.78□□□□□ -0.84
LINC00397-202ENST00000606785 RGS20O76081 388 aa9.78□□□□□ -0.84
LINC00397-202ENST00000606785 DMRTA1Q5VZB9 504 aa9.78□□□□□ -0.84
LINC00397-202ENST00000606785 OSBPP22059 807 aa9.76□□□□□ -0.85
LINC00397-202ENST00000606785 CCDC102AQ96A19 550 aa9.76□□□□□ -0.85
LINC00397-202ENST00000606785 KCTD12Q96CX2 325 aaKnown RBP9.76□□□□□ -0.85
LINC00397-202ENST00000606785 FAM117AQ9C073 453 aa9.76□□□□□ -0.85
LINC00397-202ENST00000606785 IRF6O14896 467 aa9.75□□□□□ -0.85
LINC00397-202ENST00000606785 PSEN2P49810 448 aa9.75□□□□□ -0.85
LINC00397-202ENST00000606785 AMHR2Q16671 573 aa9.75□□□□□ -0.85
LINC00397-202ENST00000606785 PTCD2Q8WV60 388 aaKnown RBP9.75□□□□□ -0.85
LINC00397-202ENST00000606785 GNPATO15228 680 aa9.74□□□□□ -0.85
LINC00397-202ENST00000606785 DDRGK1Q96HY6 314 aa9.74□□□□□ -0.85
LINC00397-202ENST00000606785 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
LINC00397-202ENST00000606785 HIC1Q14526 733 aa9.73□□□□□ -0.85
LINC00397-202ENST00000606785 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
LINC00397-202ENST00000606785 IFFO2Q5TF58 517 aa9.73□□□□□ -0.85
LINC00397-202ENST00000606785 OXER1Q8TDS5 423 aa9.73□□□□□ -0.85
LINC00397-202ENST00000606785 UPF1Q92900 1129 aaKnown RBP eCLIP9.73□□□□□ -0.85
LINC00397-202ENST00000606785 STAC3Q96MF2 364 aa9.73□□□□□ -0.85
LINC00397-202ENST00000606785 FCHSD2O94868 740 aa9.72□□□□□ -0.85
LINC00397-202ENST00000606785 PLEKHG3A1L390 1219 aa9.71□□□□□ -0.86
LINC00397-202ENST00000606785 PARP9Q8IXQ6 854 aa9.71□□□□□ -0.86
LINC00397-202ENST00000606785 KCNH8Q96L42 1107 aa9.7□□□□□ -0.86
LINC00397-202ENST00000606785 TBC1D12O60347 775 aa9.69□□□□□ -0.86
LINC00397-202ENST00000606785 DDX12PQ92771 950 aa9.69□□□□□ -0.86
LINC00397-202ENST00000606785 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
LINC00397-202ENST00000606785 IRX2Q9BZI1 471 aaPredicted RBP9.68□□□□□ -0.86
LINC00397-202ENST00000606785 FECHP22830 423 aa9.67□□□□□ -0.86
LINC00397-202ENST00000606785 EVI5O60447 810 aa9.65□□□□□ -0.86
LINC00397-202ENST00000606785 PTGDRQ13258 359 aa9.65□□□□□ -0.86
LINC00397-202ENST00000606785 KCNK17Q96T54 332 aa9.65□□□□□ -0.86
LINC00397-202ENST00000606785 PRIM1P49642 420 aaKnown RBP9.64□□□□□ -0.87
LINC00397-202ENST00000606785 TTLL12Q14166 644 aaPredicted RBP9.64□□□□□ -0.87
LINC00397-202ENST00000606785 GOPCQ9HD26 462 aa9.64□□□□□ -0.87
LINC00397-202ENST00000606785 VPS9D1Q9Y2B5 631 aa9.64□□□□□ -0.87
LINC00397-202ENST00000606785 A0A0G2JS52 829 aa9.63□□□□□ -0.87
LINC00397-202ENST00000606785 PTPN5P54829 565 aa9.63□□□□□ -0.87
LINC00397-202ENST00000606785 SLC4A5Q9BY07 1137 aa9.62□□□□□ -0.87
LINC00397-202ENST00000606785 FLIIQ13045 1269 aa9.6□□□□□ -0.87
LINC00397-202ENST00000606785 GIGYF2Q6Y7W6 1299 aaKnown RBP9.59□□□□□ -0.87
LINC00397-202ENST00000606785 THSD4Q6ZMP0 1018 aa9.59□□□□□ -0.87
LINC00397-202ENST00000606785 ANO8Q9HCE9 1232 aaPredicted RBP9.58□□□□□ -0.88
LINC00397-202ENST00000606785 MS4A1P11836 297 aa9.57□□□□□ -0.88
LINC00397-202ENST00000606785 BHMG1C9JSJ3 638 aaPredicted RBP9.56□□□□□ -0.88
LINC00397-202ENST00000606785 BCL2L12Q9HB09 334 aa9.56□□□□□ -0.88
LINC00397-202ENST00000606785 PHF14O94880 888 aa9.55□□□□□ -0.88
LINC00397-202ENST00000606785 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
LINC00397-202ENST00000606785 EN1Q05925 392 aaPredicted RBP9.55□□□□□ -0.88
LINC00397-202ENST00000606785 EPAS1Q99814 870 aa9.55□□□□□ -0.88
LINC00397-202ENST00000606785 REPIN1Q9BWE0 567 aaKnown RBP9.55□□□□□ -0.88
LINC00397-202ENST00000606785 NPDC1Q9NQX5 325 aaPredicted RBP9.55□□□□□ -0.88
LINC00397-202ENST00000606785 ONECUT3O60422 494 aaPredicted RBP9.54□□□□□ -0.88
LINC00397-202ENST00000606785 PCMTD1Q96MG8 357 aaPredicted RBP9.54□□□□□ -0.88
LINC00397-202ENST00000606785 CDHR5Q9HBB8 845 aa9.54□□□□□ -0.88
LINC00397-202ENST00000606785 CLCN1P35523 988 aa9.53□□□□□ -0.88
LINC00397-202ENST00000606785 WNT2BQ93097 391 aa9.53□□□□□ -0.88
LINC00397-202ENST00000606785 TMUB1Q9BVT8 246 aa9.53□□□□□ -0.88
LINC00397-202ENST00000606785 GOLGA8CPA6NN73 597 aa9.52□□□□□ -0.89
LINC00397-202ENST00000606785 MAP3K7O43318 606 aa9.52□□□□□ -0.89
LINC00397-202ENST00000606785 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
LINC00397-202ENST00000606785 SH3D19Q5HYK7 790 aa9.51□□□□□ -0.89
LINC00397-202ENST00000606785 MRPL50Q8N5N7 158 aaKnown RBP9.51□□□□□ -0.89
LINC00397-202ENST00000606785 C1orf115Q9H7X2 142 aa9.51□□□□□ -0.89
LINC00397-202ENST00000606785 GPCPD1Q9NPB8 672 aa9.51□□□□□ -0.89
LINC00397-202ENST00000606785 PTPREP23469 700 aa9.5□□□□□ -0.89
LINC00397-202ENST00000606785 ZBED2Q9BTP6 218 aa9.5□□□□□ -0.89
LINC00397-202ENST00000606785 FOSBP53539 338 aa9.48□□□□□ -0.89
LINC00397-202ENST00000606785 MDM2Q00987 491 aaPredicted RBP9.48□□□□□ -0.89
LINC00397-202ENST00000606785 TYW1BQ6NUM6 668 aa9.48□□□□□ -0.89
LINC00397-202ENST00000606785 RBM33Q96EV2 1170 aaKnown RBP9.48□□□□□ -0.89
LINC00397-202ENST00000606785 ARID3AQ99856 593 aa9.48□□□□□ -0.89
LINC00397-202ENST00000606785 NBPF3Q9H094 633 aa9.48□□□□□ -0.89
LINC00397-202ENST00000606785 PCDHGA10Q9Y5H3 936 aa9.48□□□□□ -0.89
LINC00397-202ENST00000606785 APBB1O00213 710 aa9.47□□□□□ -0.89
LINC00397-202ENST00000606785 PHOX2BQ99453 314 aa9.47□□□□□ -0.89
LINC00397-202ENST00000606785 A6NJR5 290 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms