RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 AXIN2Q9Y2T1 843 aa9.93□□□□□ -0.82
LINC00397-202ENST00000606785 C2orf72A6NCS6 295 aa9.92□□□□□ -0.82
LINC00397-202ENST00000606785 FOXK1P85037 733 aa9.92□□□□□ -0.82
LINC00397-202ENST00000606785 PCDHGA4Q9Y5G9 962 aa9.92□□□□□ -0.82
LINC00397-202ENST00000606785 ADGRD1Q6QNK2 874 aa9.91□□□□□ -0.82
LINC00397-202ENST00000606785 HOMEZQ8IX15 550 aa9.91□□□□□ -0.82
LINC00397-202ENST00000606785 TMC2Q8TDI7 906 aa9.91□□□□□ -0.82
LINC00397-202ENST00000606785 TRIM66O15016 1216 aa9.9□□□□□ -0.82
LINC00397-202ENST00000606785 KDM4CQ9H3R0 1056 aa9.9□□□□□ -0.82
LINC00397-202ENST00000606785 PSDA5PKW4 1024 aaPredicted RBP9.89□□□□□ -0.83
LINC00397-202ENST00000606785 ARHGAP33O14559 1287 aa9.89□□□□□ -0.83
LINC00397-202ENST00000606785 PDE4DQ08499 809 aa9.88□□□□□ -0.83
LINC00397-202ENST00000606785 TK2O00142 265 aa9.87□□□□□ -0.83
LINC00397-202ENST00000606785 IL27Q8NEV9 243 aa9.87□□□□□ -0.83
LINC00397-202ENST00000606785 GPR37O15354 613 aa9.86□□□□□ -0.83
LINC00397-202ENST00000606785 SUPT5HO00267 1087 aaKnown RBP9.85□□□□□ -0.83
LINC00397-202ENST00000606785 PLPP6Q8IY26 295 aa9.85□□□□□ -0.83
LINC00397-202ENST00000606785 HRO43593 1189 aa9.84□□□□□ -0.83
LINC00397-202ENST00000606785 MINK1Q8N4C8 1332 aaPredicted RBP9.82□□□□□ -0.84
LINC00397-202ENST00000606785 MAP3K9P80192 1104 aa9.81□□□□□ -0.84
LINC00397-202ENST00000606785 GRXCR2A6NFK2 248 aa9.8□□□□□ -0.84
LINC00397-202ENST00000606785 KDM4FA0A1W2PPD8 638 aa9.79□□□□□ -0.84
LINC00397-202ENST00000606785 MAP2K5Q13163 448 aa9.79□□□□□ -0.84
LINC00397-202ENST00000606785 NUTM2FA1L443 756 aa9.78□□□□□ -0.84
LINC00397-202ENST00000606785 RGS20O76081 388 aa9.78□□□□□ -0.84
LINC00397-202ENST00000606785 DMRTA1Q5VZB9 504 aa9.78□□□□□ -0.84
LINC00397-202ENST00000606785 OSBPP22059 807 aa9.76□□□□□ -0.85
LINC00397-202ENST00000606785 CCDC102AQ96A19 550 aa9.76□□□□□ -0.85
LINC00397-202ENST00000606785 KCTD12Q96CX2 325 aaKnown RBP9.76□□□□□ -0.85
LINC00397-202ENST00000606785 FAM117AQ9C073 453 aa9.76□□□□□ -0.85
LINC00397-202ENST00000606785 IRF6O14896 467 aa9.75□□□□□ -0.85
LINC00397-202ENST00000606785 PSEN2P49810 448 aa9.75□□□□□ -0.85
LINC00397-202ENST00000606785 AMHR2Q16671 573 aa9.75□□□□□ -0.85
LINC00397-202ENST00000606785 PTCD2Q8WV60 388 aaKnown RBP9.75□□□□□ -0.85
LINC00397-202ENST00000606785 GNPATO15228 680 aa9.74□□□□□ -0.85
LINC00397-202ENST00000606785 DDRGK1Q96HY6 314 aa9.74□□□□□ -0.85
LINC00397-202ENST00000606785 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
LINC00397-202ENST00000606785 HIC1Q14526 733 aa9.73□□□□□ -0.85
LINC00397-202ENST00000606785 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
LINC00397-202ENST00000606785 IFFO2Q5TF58 517 aa9.73□□□□□ -0.85
LINC00397-202ENST00000606785 OXER1Q8TDS5 423 aa9.73□□□□□ -0.85
LINC00397-202ENST00000606785 UPF1Q92900 1129 aaKnown RBP eCLIP9.73□□□□□ -0.85
LINC00397-202ENST00000606785 STAC3Q96MF2 364 aa9.73□□□□□ -0.85
LINC00397-202ENST00000606785 FCHSD2O94868 740 aa9.72□□□□□ -0.85
LINC00397-202ENST00000606785 PLEKHG3A1L390 1219 aa9.71□□□□□ -0.86
LINC00397-202ENST00000606785 PARP9Q8IXQ6 854 aa9.71□□□□□ -0.86
LINC00397-202ENST00000606785 KCNH8Q96L42 1107 aa9.7□□□□□ -0.86
LINC00397-202ENST00000606785 TBC1D12O60347 775 aa9.69□□□□□ -0.86
LINC00397-202ENST00000606785 DDX12PQ92771 950 aa9.69□□□□□ -0.86
LINC00397-202ENST00000606785 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
LINC00397-202ENST00000606785 IRX2Q9BZI1 471 aaPredicted RBP9.68□□□□□ -0.86
LINC00397-202ENST00000606785 FECHP22830 423 aa9.67□□□□□ -0.86
LINC00397-202ENST00000606785 EVI5O60447 810 aa9.65□□□□□ -0.86
LINC00397-202ENST00000606785 PTGDRQ13258 359 aa9.65□□□□□ -0.86
LINC00397-202ENST00000606785 KCNK17Q96T54 332 aa9.65□□□□□ -0.86
LINC00397-202ENST00000606785 PRIM1P49642 420 aaKnown RBP9.64□□□□□ -0.87
LINC00397-202ENST00000606785 TTLL12Q14166 644 aaPredicted RBP9.64□□□□□ -0.87
LINC00397-202ENST00000606785 GOPCQ9HD26 462 aa9.64□□□□□ -0.87
LINC00397-202ENST00000606785 VPS9D1Q9Y2B5 631 aa9.64□□□□□ -0.87
LINC00397-202ENST00000606785 A0A0G2JS52 829 aa9.63□□□□□ -0.87
LINC00397-202ENST00000606785 PTPN5P54829 565 aa9.63□□□□□ -0.87
LINC00397-202ENST00000606785 SLC4A5Q9BY07 1137 aa9.62□□□□□ -0.87
LINC00397-202ENST00000606785 FLIIQ13045 1269 aa9.6□□□□□ -0.87
LINC00397-202ENST00000606785 GIGYF2Q6Y7W6 1299 aaKnown RBP9.59□□□□□ -0.87
LINC00397-202ENST00000606785 THSD4Q6ZMP0 1018 aa9.59□□□□□ -0.87
LINC00397-202ENST00000606785 ANO8Q9HCE9 1232 aaPredicted RBP9.58□□□□□ -0.88
LINC00397-202ENST00000606785 MS4A1P11836 297 aa9.57□□□□□ -0.88
LINC00397-202ENST00000606785 BHMG1C9JSJ3 638 aaPredicted RBP9.56□□□□□ -0.88
LINC00397-202ENST00000606785 BCL2L12Q9HB09 334 aa9.56□□□□□ -0.88
LINC00397-202ENST00000606785 PHF14O94880 888 aa9.55□□□□□ -0.88
LINC00397-202ENST00000606785 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
LINC00397-202ENST00000606785 EN1Q05925 392 aaPredicted RBP9.55□□□□□ -0.88
LINC00397-202ENST00000606785 EPAS1Q99814 870 aa9.55□□□□□ -0.88
LINC00397-202ENST00000606785 REPIN1Q9BWE0 567 aaKnown RBP9.55□□□□□ -0.88
LINC00397-202ENST00000606785 NPDC1Q9NQX5 325 aaPredicted RBP9.55□□□□□ -0.88
LINC00397-202ENST00000606785 ONECUT3O60422 494 aaPredicted RBP9.54□□□□□ -0.88
LINC00397-202ENST00000606785 PCMTD1Q96MG8 357 aaPredicted RBP9.54□□□□□ -0.88
LINC00397-202ENST00000606785 CDHR5Q9HBB8 845 aa9.54□□□□□ -0.88
LINC00397-202ENST00000606785 CLCN1P35523 988 aa9.53□□□□□ -0.88
LINC00397-202ENST00000606785 WNT2BQ93097 391 aa9.53□□□□□ -0.88
LINC00397-202ENST00000606785 TMUB1Q9BVT8 246 aa9.53□□□□□ -0.88
LINC00397-202ENST00000606785 GOLGA8CPA6NN73 597 aa9.52□□□□□ -0.89
LINC00397-202ENST00000606785 MAP3K7O43318 606 aa9.52□□□□□ -0.89
LINC00397-202ENST00000606785 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
LINC00397-202ENST00000606785 SH3D19Q5HYK7 790 aa9.51□□□□□ -0.89
LINC00397-202ENST00000606785 MRPL50Q8N5N7 158 aaKnown RBP9.51□□□□□ -0.89
LINC00397-202ENST00000606785 C1orf115Q9H7X2 142 aa9.51□□□□□ -0.89
LINC00397-202ENST00000606785 GPCPD1Q9NPB8 672 aa9.51□□□□□ -0.89
LINC00397-202ENST00000606785 PTPREP23469 700 aa9.5□□□□□ -0.89
LINC00397-202ENST00000606785 ZBED2Q9BTP6 218 aa9.5□□□□□ -0.89
LINC00397-202ENST00000606785 FOSBP53539 338 aa9.48□□□□□ -0.89
LINC00397-202ENST00000606785 MDM2Q00987 491 aaPredicted RBP9.48□□□□□ -0.89
LINC00397-202ENST00000606785 TYW1BQ6NUM6 668 aa9.48□□□□□ -0.89
LINC00397-202ENST00000606785 RBM33Q96EV2 1170 aaKnown RBP9.48□□□□□ -0.89
LINC00397-202ENST00000606785 ARID3AQ99856 593 aa9.48□□□□□ -0.89
LINC00397-202ENST00000606785 NBPF3Q9H094 633 aa9.48□□□□□ -0.89
LINC00397-202ENST00000606785 PCDHGA10Q9Y5H3 936 aa9.48□□□□□ -0.89
LINC00397-202ENST00000606785 APBB1O00213 710 aa9.47□□□□□ -0.89
LINC00397-202ENST00000606785 PHOX2BQ99453 314 aa9.47□□□□□ -0.89
LINC00397-202ENST00000606785 A6NJR5 290 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms