RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 ADAM33Q9BZ11 813 aa12.65□□□□□ -0.38
SH3D19-213ENST00000604922 POTEEQ6S8J3 1075 aa12.64□□□□□ -0.39
SH3D19-213ENST00000604922 LSM11P83369 360 aaKnown RBP eCLIP12.63□□□□□ -0.39
SH3D19-213ENST00000604922 PSEN2P49810 448 aa12.62□□□□□ -0.39
SH3D19-213ENST00000604922 RBM33Q96EV2 1170 aaKnown RBP12.6□□□□□ -0.39
SH3D19-213ENST00000604922 MAP3K7O43318 606 aa12.58□□□□□ -0.4
SH3D19-213ENST00000604922 EN1Q05925 392 aaPredicted RBP12.58□□□□□ -0.4
SH3D19-213ENST00000604922 C6orf132Q5T0Z8 1188 aa12.57□□□□□ -0.4
SH3D19-213ENST00000604922 SEMA3EO15041 775 aa12.56□□□□□ -0.4
SH3D19-213ENST00000604922 DMRTA1Q5VZB9 504 aa12.56□□□□□ -0.4
SH3D19-213ENST00000604922 TK2O00142 265 aa12.55□□□□□ -0.4
SH3D19-213ENST00000604922 OSBPP22059 807 aa12.55□□□□□ -0.4
SH3D19-213ENST00000604922 MLLT3P42568 568 aaPredicted RBP12.55□□□□□ -0.4
SH3D19-213ENST00000604922 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
SH3D19-213ENST00000604922 SMYD5Q6GMV2 418 aa12.54□□□□□ -0.4
SH3D19-213ENST00000604922 PPP1R3GB7ZBB8 358 aa12.53□□□□□ -0.4
SH3D19-213ENST00000604922 ADGRD1Q6QNK2 874 aa12.53□□□□□ -0.4
SH3D19-213ENST00000604922 SLC4A5Q9BY07 1137 aa12.51□□□□□ -0.41
SH3D19-213ENST00000604922 STAC3Q96MF2 364 aa12.5□□□□□ -0.41
SH3D19-213ENST00000604922 TESPA1A2RU30 521 aaPredicted RBP12.49□□□□□ -0.41
SH3D19-213ENST00000604922 TSR1Q2NL82 804 aaKnown RBP12.49□□□□□ -0.41
SH3D19-213ENST00000604922 CERKQ8TCT0 537 aa12.49□□□□□ -0.41
SH3D19-213ENST00000604922 ZBED2Q9BTP6 218 aa12.49□□□□□ -0.41
SH3D19-213ENST00000604922 COL9A1P20849 921 aa12.48□□□□□ -0.41
SH3D19-213ENST00000604922 HCSTQ9UBK5 93 aa12.48□□□□□ -0.41
SH3D19-213ENST00000604922 VPS9D1Q9Y2B5 631 aa12.48□□□□□ -0.41
SH3D19-213ENST00000604922 PRIM1P49642 420 aaKnown RBP12.47□□□□□ -0.41
SH3D19-213ENST00000604922 TULP1O00294 542 aaPredicted RBP12.45□□□□□ -0.42
SH3D19-213ENST00000604922 HRO43593 1189 aa12.42□□□□□ -0.42
SH3D19-213ENST00000604922 ONECUT3O60422 494 aaPredicted RBP12.42□□□□□ -0.42
SH3D19-213ENST00000604922 NBPF3Q9H094 633 aa12.42□□□□□ -0.42
SH3D19-213ENST00000604922 NUTM2FA1L443 756 aa12.41□□□□□ -0.42
SH3D19-213ENST00000604922 PROX2Q3B8N5 592 aa12.41□□□□□ -0.42
SH3D19-213ENST00000604922 CDHR5Q9HBB8 845 aa12.41□□□□□ -0.42
SH3D19-213ENST00000604922 RABGEF1Q9UJ41 708 aa12.41□□□□□ -0.42
SH3D19-213ENST00000604922 TRIM6-TRIM34B2RNG4 842 aa12.39□□□□□ -0.43
SH3D19-213ENST00000604922 PRSS12P56730 875 aa12.38□□□□□ -0.43
SH3D19-213ENST00000604922 MRPL50Q8N5N7 158 aaKnown RBP12.38□□□□□ -0.43
SH3D19-213ENST00000604922 CDCA7LQ96GN5 454 aa12.38□□□□□ -0.43
SH3D19-213ENST00000604922 BHMG1C9JSJ3 638 aaPredicted RBP12.37□□□□□ -0.43
SH3D19-213ENST00000604922 PACS2Q86VP3 889 aa12.37□□□□□ -0.43
SH3D19-213ENST00000604922 KIAA1468Q9P260 1216 aa12.37□□□□□ -0.43
SH3D19-213ENST00000604922 RBM26Q5T8P6 1007 aaKnown RBP12.36□□□□□ -0.43
SH3D19-213ENST00000604922 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
SH3D19-213ENST00000604922 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
SH3D19-213ENST00000604922 NPDC1Q9NQX5 325 aaPredicted RBP12.34□□□□□ -0.43
SH3D19-213ENST00000604922 PTGDRQ13258 359 aa12.33□□□□□ -0.44
SH3D19-213ENST00000604922 TSKSQ9UJT2 592 aa12.33□□□□□ -0.44
SH3D19-213ENST00000604922 FCHSD2O94868 740 aa12.32□□□□□ -0.44
SH3D19-213ENST00000604922 LAPTM4BQ86VI4 370 aa12.32□□□□□ -0.44
SH3D19-213ENST00000604922 IRX2Q9BZI1 471 aaPredicted RBP12.3□□□□□ -0.44
SH3D19-213ENST00000604922 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
SH3D19-213ENST00000604922 PADI6Q6TGC4 694 aa12.29□□□□□ -0.44
SH3D19-213ENST00000604922 GPIHBP1Q8IV16 184 aa12.28□□□□□ -0.44
SH3D19-213ENST00000604922 KCTD12Q96CX2 325 aaKnown RBP12.27□□□□□ -0.45
SH3D19-213ENST00000604922 SEPT9Q9UHD8 586 aaPredicted RBP12.27□□□□□ -0.45
SH3D19-213ENST00000604922 HIC1Q14526 733 aa12.26□□□□□ -0.45
SH3D19-213ENST00000604922 FAM98CQ17RN3 349 aaKnown RBP12.26□□□□□ -0.45
SH3D19-213ENST00000604922 TATDN2Q93075 761 aa12.26□□□□□ -0.45
SH3D19-213ENST00000604922 WNT2BQ93097 391 aa12.26□□□□□ -0.45
SH3D19-213ENST00000604922 FAM198AQ9UFP1 575 aa12.26□□□□□ -0.45
SH3D19-213ENST00000604922 PNMA3Q9UL41 463 aa12.26□□□□□ -0.45
SH3D19-213ENST00000604922 TTC13Q8NBP0 860 aa12.25□□□□□ -0.45
SH3D19-213ENST00000604922 ANKK1Q8NFD2 765 aa12.24□□□□□ -0.45
SH3D19-213ENST00000604922 NUDT18Q6ZVK8 323 aa12.23□□□□□ -0.45
SH3D19-213ENST00000604922 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.23□□□□□ -0.45
SH3D19-213ENST00000604922 ZFRQ96KR1 1074 aaKnown RBP12.23□□□□□ -0.45
SH3D19-213ENST00000604922 SMAPO00193 183 aa12.21□□□□□ -0.45
SH3D19-213ENST00000604922 GNPATO15228 680 aa12.21□□□□□ -0.45
SH3D19-213ENST00000604922 RGS20O76081 388 aa12.2□□□□□ -0.46
SH3D19-213ENST00000604922 HDGFP51858 240 aaKnown RBP12.2□□□□□ -0.46
SH3D19-213ENST00000604922 LMOD2Q6P5Q4 547 aa12.2□□□□□ -0.46
SH3D19-213ENST00000604922 BCANQ96GW7 911 aa12.19□□□□□ -0.46
SH3D19-213ENST00000604922 THSD4Q6ZMP0 1018 aa12.18□□□□□ -0.46
SH3D19-213ENST00000604922 RBM46Q8TBY0 533 aaKnown RBP12.18□□□□□ -0.46
SH3D19-213ENST00000604922 GPR37O15354 613 aa12.17□□□□□ -0.46
SH3D19-213ENST00000604922 PTPN5P54829 565 aa12.16□□□□□ -0.46
SH3D19-213ENST00000604922 LRCH3Q96II8 777 aa12.16□□□□□ -0.46
SH3D19-213ENST00000604922 C3orf80F5H4A9 247 aa12.15□□□□□ -0.46
SH3D19-213ENST00000604922 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.15□□□□□ -0.46
SH3D19-213ENST00000604922 ADGRG1Q9Y653 693 aa12.15□□□□□ -0.46
SH3D19-213ENST00000604922 SOWAHBA6NEL2 793 aa12.14□□□□□ -0.47
SH3D19-213ENST00000604922 OATP04181 439 aa12.14□□□□□ -0.47
SH3D19-213ENST00000604922 EYA1Q99502 592 aa12.14□□□□□ -0.47
SH3D19-213ENST00000604922 FECHP22830 423 aa12.13□□□□□ -0.47
SH3D19-213ENST00000604922 SLC4A3P48751 1232 aa12.12□□□□□ -0.47
SH3D19-213ENST00000604922 BCAMP50895 628 aa12.12□□□□□ -0.47
SH3D19-213ENST00000604922 FAM161AQ3B820 660 aa12.11□□□□□ -0.47
SH3D19-213ENST00000604922 SAMD7Q7Z3H4 446 aa12.11□□□□□ -0.47
SH3D19-213ENST00000604922 DNAJB2P25686 324 aa12.09□□□□□ -0.47
SH3D19-213ENST00000604922 TSR3Q9UJK0 312 aaKnown RBP12.08□□□□□ -0.48
SH3D19-213ENST00000604922 RNF40O75150 1001 aa12.07□□□□□ -0.48
SH3D19-213ENST00000604922 PXYLP1Q8TE99 480 aa12.07□□□□□ -0.48
SH3D19-213ENST00000604922 HPS5Q9UPZ3 1129 aa12.07□□□□□ -0.48
SH3D19-213ENST00000604922 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.06□□□□□ -0.48
SH3D19-213ENST00000604922 RCCD1A6NED2 376 aa12.06□□□□□ -0.48
SH3D19-213ENST00000604922 PPP4CP60510 307 aa12.06□□□□□ -0.48
SH3D19-213ENST00000604922 MAP2K5Q13163 448 aa12.06□□□□□ -0.48
SH3D19-213ENST00000604922 SWT1Q5T5J6 900 aaKnown RBP12.06□□□□□ -0.48
SH3D19-213ENST00000604922 METTL3Q86U44 580 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms