RNA–Protein interactions for RNA: ENST00000602290.1

HCG18-241, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 821 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-241ENST00000602290 ZC3H13Q5T200 1668 aaKnown RBP19.87■□□□□ 0.77
HCG18-241ENST00000602290 LRRIQ1Q96JM4 1722 aa19.87■□□□□ 0.77
HCG18-241ENST00000602290 FMN1Q68DA7 1419 aa19.86■□□□□ 0.77
HCG18-241ENST00000602290 CDC42BPAQ5VT25 1732 aa19.86■□□□□ 0.77
HCG18-241ENST00000602290 UGGT1Q9NYU2 1555 aa19.86■□□□□ 0.77
HCG18-241ENST00000602290 NLRP1Q9C000 1473 aa19.86■□□□□ 0.77
HCG18-241ENST00000602290 CSRNP3Q8WYN3 585 aa19.85■□□□□ 0.77
HCG18-241ENST00000602290 SPAG9O60271 1321 aaKnown RBP19.84■□□□□ 0.77
HCG18-241ENST00000602290 FAM135AQ9P2D6 1515 aa19.83■□□□□ 0.77
HCG18-241ENST00000602290 GGT6Q6P531 493 aa19.83■□□□□ 0.77
HCG18-241ENST00000602290 FBXO31Q5XUX0 539 aaPredicted RBP19.8■□□□□ 0.76
HCG18-241ENST00000602290 ROBO1Q9Y6N7 1651 aa19.8■□□□□ 0.76
HCG18-241ENST00000602290 ADGBQ8N7X0 1667 aa19.79■□□□□ 0.76
HCG18-241ENST00000602290 THEMISQ8N1K5 641 aaPredicted RBP19.79■□□□□ 0.76
HCG18-241ENST00000602290 KDM5DQ9BY66 1539 aa19.78■□□□□ 0.76
HCG18-241ENST00000602290 MIA2Q96PC5 1412 aa19.76■□□□□ 0.75
HCG18-241ENST00000602290 KIAA1107Q9UPP5 1409 aa19.76■□□□□ 0.75
HCG18-241ENST00000602290 LRP6O75581 1613 aa19.74■□□□□ 0.75
HCG18-241ENST00000602290 ARHGAP35Q9NRY4 1499 aa19.73■□□□□ 0.75
HCG18-241ENST00000602290 CDK12Q9NYV4 1490 aaPredicted RBP19.73■□□□□ 0.75
HCG18-241ENST00000602290 MAP3K1Q13233 1512 aa19.72■□□□□ 0.75
HCG18-241ENST00000602290 ATP1B4Q9UN42 357 aaPredicted RBP19.72■□□□□ 0.75
HCG18-241ENST00000602290 LRRC9Q6ZRR7 1453 aa19.7■□□□□ 0.74
HCG18-241ENST00000602290 GPATCH8Q9UKJ3 1502 aaKnown RBP19.7■□□□□ 0.74
HCG18-241ENST00000602290 JCADQ9P266 1359 aa19.7■□□□□ 0.74
HCG18-241ENST00000602290 PLEKHH2Q8IVE3 1493 aa19.69■□□□□ 0.74
HCG18-241ENST00000602290 HNRNPMP52272 730 aaKnown RBP eCLIP19.69■□□□□ 0.742e-7■□□□□ 10.1
HCG18-241ENST00000602290 SCAF11Q99590 1463 aaKnown RBP19.67■□□□□ 0.74
HCG18-241ENST00000602290 TRIM52Q96A61 297 aa19.67■□□□□ 0.74
HCG18-241ENST00000602290 EEA1Q15075 1411 aa19.67■□□□□ 0.74
HCG18-241ENST00000602290 COL16A1Q07092 1604 aaPredicted RBP19.66■□□□□ 0.74
HCG18-241ENST00000602290 CCDC18Q5T9S5 1454 aa19.66■□□□□ 0.74
HCG18-241ENST00000602290 DHX29Q7Z478 1369 aaKnown RBP19.64■□□□□ 0.73
HCG18-241ENST00000602290 ARHGAP23Q9P227 1491 aa19.64■□□□□ 0.73
HCG18-241ENST00000602290 PHLPP1O60346 1717 aa19.64■□□□□ 0.73
HCG18-241ENST00000602290 TMEM94Q12767 1356 aa19.63■□□□□ 0.73
HCG18-241ENST00000602290 ZNF772Q68DY9 489 aaPredicted RBP19.63■□□□□ 0.73
HCG18-241ENST00000602290 ZNF777Q9ULD5 760 aaPredicted RBP19.63■□□□□ 0.73
HCG18-241ENST00000602290 UBR1Q8IWV7 1749 aa19.62■□□□□ 0.73
HCG18-241ENST00000602290 SLIT1O75093 1534 aa19.61■□□□□ 0.73
HCG18-241ENST00000602290 NCOA2Q15596 1464 aa19.6■□□□□ 0.73
HCG18-241ENST00000602290 RTEL1-TNFRSF6BF6WH68 1400 aa19.6■□□□□ 0.73
HCG18-241ENST00000602290 FGD6Q6ZV73 1430 aa19.59■□□□□ 0.73
HCG18-241ENST00000602290 TIAM1Q13009 1591 aa19.58■□□□□ 0.73
HCG18-241ENST00000602290 MBD5Q9P267 1494 aa19.58■□□□□ 0.72
HCG18-241ENST00000602290 SETBP1Q9Y6X0 1596 aa19.57■□□□□ 0.72
HCG18-241ENST00000602290 SPATA31A6Q5VVP1 1343 aa19.57■□□□□ 0.72
HCG18-241ENST00000602290 ERVK-7P63135 1459 aa19.57■□□□□ 0.72
HCG18-241ENST00000602290 RGS12O14924 1447 aa19.56■□□□□ 0.72
HCG18-241ENST00000602290 CASKIN1Q8WXD9 1431 aa19.56■□□□□ 0.72
HCG18-241ENST00000602290 PRDM15P57071 1507 aaPredicted RBP19.55■□□□□ 0.72
HCG18-241ENST00000602290 RXRBP28702 533 aa19.54■□□□□ 0.72
HCG18-241ENST00000602290 LTKP29376 864 aa19.54■□□□□ 0.72
HCG18-241ENST00000602290 SHPRHQ149N8 1683 aa19.54■□□□□ 0.72
HCG18-241ENST00000602290 WASHC2CQ9Y4E1 1318 aa19.53■□□□□ 0.72
HCG18-241ENST00000602290 NWD1Q149M9 1564 aa19.53■□□□□ 0.72
HCG18-241ENST00000602290 ABCC3O15438 1527 aa19.52■□□□□ 0.72
HCG18-241ENST00000602290 KIF3BO15066 747 aa19.52■□□□□ 0.72
HCG18-241ENST00000602290 NKTRP30414 1462 aaKnown RBP19.52■□□□□ 0.72
HCG18-241ENST00000602290 CAMSAP2Q08AD1 1489 aa19.52■□□□□ 0.72
HCG18-241ENST00000602290 AHDC1Q5TGY3 1603 aaPredicted RBP19.49■□□□□ 0.71
HCG18-241ENST00000602290 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
HCG18-241ENST00000602290 MEX3CQ5U5Q3 659 aaKnown RBP19.46■□□□□ 0.71
HCG18-241ENST00000602290 DIP2AQ14689 1571 aa19.45■□□□□ 0.7
HCG18-241ENST00000602290 KCNA6P17658 529 aa19.44■□□□□ 0.7
HCG18-241ENST00000602290 TXNDC2Q86VQ3 553 aa19.44■□□□□ 0.7
HCG18-241ENST00000602290 MSH6P52701 1360 aa19.44■□□□□ 0.7
HCG18-241ENST00000602290 TET3O43151 1660 aa19.43■□□□□ 0.7
HCG18-241ENST00000602290 KDM5AP29375 1690 aaKnown RBP19.43■□□□□ 0.7
HCG18-241ENST00000602290 EP400Q96L91 3159 aa19.43■□□□□ 0.7
HCG18-241ENST00000602290 FYCO1Q9BQS8 1478 aa19.43■□□□□ 0.7
HCG18-241ENST00000602290 SLAIN2Q9P270 581 aa19.43■□□□□ 0.7
HCG18-241ENST00000602290 RBM33Q96EV2 1170 aaKnown RBP19.42■□□□□ 0.7
HCG18-241ENST00000602290 MROH1Q8NDA8 1641 aa19.42■□□□□ 0.7
HCG18-241ENST00000602290 ZNF644Q9H582 1327 aaPredicted RBP19.42■□□□□ 0.7
HCG18-241ENST00000602290 CCNB3Q8WWL7 1395 aa19.42■□□□□ 0.7
HCG18-241ENST00000602290 ZRANB1Q9UGI0 708 aa19.41■□□□□ 0.7
HCG18-241ENST00000602290 CCDC141Q6ZP82 1450 aa19.4■□□□□ 0.7
HCG18-241ENST00000602290 PROSER2Q86WR7 435 aaPredicted RBP19.39■□□□□ 0.69
HCG18-241ENST00000602290 AFF2P51816 1311 aa19.39■□□□□ 0.69
HCG18-241ENST00000602290 TMEM2Q9UHN6 1383 aa19.39■□□□□ 0.69
HCG18-241ENST00000602290 LRP5O75197 1615 aa19.38■□□□□ 0.69
HCG18-241ENST00000602290 ATAD2Q6PL18 1390 aa19.37■□□□□ 0.69
HCG18-241ENST00000602290 PIK3C2BO00750 1634 aa19.35■□□□□ 0.69
HCG18-241ENST00000602290 EID1Q9Y6B2 187 aa19.34■□□□□ 0.69
HCG18-241ENST00000602290 MAST1Q9Y2H9 1570 aa19.33■□□□□ 0.69
HCG18-241ENST00000602290 RBM6P78332 1123 aaKnown RBP19.33■□□□□ 0.68
HCG18-241ENST00000602290 FOXD1Q16676 465 aa19.33■□□□□ 0.68
HCG18-241ENST00000602290 CEP152O94986 1710 aa19.32■□□□□ 0.68
HCG18-241ENST00000602290 EIF2AK4Q9P2K8 1649 aaKnown RBP19.32■□□□□ 0.68
HCG18-241ENST00000602290 NUTM2BA6NNL0 878 aaPredicted RBP19.3■□□□□ 0.68
HCG18-241ENST00000602290 NUTM2EB1AL46 878 aaPredicted RBP19.3■□□□□ 0.68
HCG18-241ENST00000602290 NUTM2DQ5VT03 806 aaPredicted RBP19.3■□□□□ 0.68
HCG18-241ENST00000602290 NUTM2AQ8IVF1 878 aaPredicted RBP19.3■□□□□ 0.68
HCG18-241ENST00000602290 ARHGAP31Q2M1Z3 1444 aa19.3■□□□□ 0.68
HCG18-241ENST00000602290 EFCAB6Q5THR3 1501 aa19.29■□□□□ 0.68
HCG18-241ENST00000602290 NCOA3Q9Y6Q9 1424 aa19.28■□□□□ 0.68
HCG18-241ENST00000602290 UBTFP17480 764 aaKnown RBP19.28■□□□□ 0.68
HCG18-241ENST00000602290 SLC26A8Q96RN1 970 aa19.27■□□□□ 0.68
HCG18-241ENST00000602290 SETD5Q9C0A6 1442 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms