RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 LARP6Q9BRS8 491 aaKnown RBP12.63□□□□□ -0.39
FARP1-239ENST00000602171 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
FARP1-239ENST00000602171 CUX2O14529 1486 aa12.6□□□□□ -0.39
FARP1-239ENST00000602171 WDR62O43379 1518 aa12.6□□□□□ -0.39
FARP1-239ENST00000602171 MFSD10Q14728 455 aa12.59□□□□□ -0.39
FARP1-239ENST00000602171 URB2Q14146 1524 aaKnown RBP12.58□□□□□ -0.4
FARP1-239ENST00000602171 PSEN2P49810 448 aa12.58□□□□□ -0.4
FARP1-239ENST00000602171 ZNF454Q8N9F8 522 aa12.57□□□□□ -0.4
FARP1-239ENST00000602171 STAC3Q96MF2 364 aa12.57□□□□□ -0.4
FARP1-239ENST00000602171 ANO8Q9HCE9 1232 aaPredicted RBP12.57□□□□□ -0.4
FARP1-239ENST00000602171 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
FARP1-239ENST00000602171 WRNQ14191 1432 aaPredicted RBP eCLIP12.56□□□□□ -0.4
FARP1-239ENST00000602171 TOPBP1Q92547 1522 aa12.56□□□□□ -0.4
FARP1-239ENST00000602171 DMRTA1Q5VZB9 504 aa12.55□□□□□ -0.4
FARP1-239ENST00000602171 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
FARP1-239ENST00000602171 BCL2L12Q9HB09 334 aa12.55□□□□□ -0.4
FARP1-239ENST00000602171 HCSTQ9UBK5 93 aa12.55□□□□□ -0.4
FARP1-239ENST00000602171 EVI5O60447 810 aa12.54□□□□□ -0.4
FARP1-239ENST00000602171 FOSBP53539 338 aa12.54□□□□□ -0.4
FARP1-239ENST00000602171 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
FARP1-239ENST00000602171 HRO43593 1189 aa12.53□□□□□ -0.4
FARP1-239ENST00000602171 BBXQ8WY36 941 aaPredicted RBP12.52□□□□□ -0.41
FARP1-239ENST00000602171 JPH4Q96JJ6 628 aa12.52□□□□□ -0.41
FARP1-239ENST00000602171 CUX1P39880 1505 aa12.52□□□□□ -0.41
FARP1-239ENST00000602171 PTPREP23469 700 aa12.51□□□□□ -0.41
FARP1-239ENST00000602171 SLC4A5Q9BY07 1137 aa12.5□□□□□ -0.41
FARP1-239ENST00000602171 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
FARP1-239ENST00000602171 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
FARP1-239ENST00000602171 IFT140Q96RY7 1462 aa12.47□□□□□ -0.41
FARP1-239ENST00000602171 AMER1Q5JTC6 1135 aaPredicted RBP12.47□□□□□ -0.41
FARP1-239ENST00000602171 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
FARP1-239ENST00000602171 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.41
FARP1-239ENST00000602171 FGD5Q6ZNL6 1462 aa12.46□□□□□ -0.41
FARP1-239ENST00000602171 SOGA1O94964 1423 aa12.45□□□□□ -0.42
FARP1-239ENST00000602171 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
FARP1-239ENST00000602171 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
FARP1-239ENST00000602171 EMILIN3Q9NT22 766 aa12.45□□□□□ -0.42
FARP1-239ENST00000602171 SYNJ1O43426 1573 aa12.44□□□□□ -0.42
FARP1-239ENST00000602171 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
FARP1-239ENST00000602171 CAMK2BQ13554 666 aa12.4□□□□□ -0.42
FARP1-239ENST00000602171 FBXW7Q969H0 707 aa12.4□□□□□ -0.42
FARP1-239ENST00000602171 KCTD12Q96CX2 325 aaKnown RBP12.4□□□□□ -0.42
FARP1-239ENST00000602171 RAD54L2Q9Y4B4 1467 aa12.4□□□□□ -0.43
FARP1-239ENST00000602171 SPRYD3Q8NCJ5 442 aa12.39□□□□□ -0.43
FARP1-239ENST00000602171 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
FARP1-239ENST00000602171 ADAM33Q9BZ11 813 aa12.39□□□□□ -0.43
FARP1-239ENST00000602171 RTN4Q9NQC3 1192 aaKnown RBP12.38□□□□□ -0.43
FARP1-239ENST00000602171 PLA2G2EQ9NZK7 142 aa12.38□□□□□ -0.43
FARP1-239ENST00000602171 ABCA10Q8WWZ4 1543 aa12.37□□□□□ -0.43
FARP1-239ENST00000602171 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
FARP1-239ENST00000602171 PHF14O94880 888 aa12.37□□□□□ -0.43
FARP1-239ENST00000602171 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
FARP1-239ENST00000602171 TYW1BQ6NUM6 668 aa12.36□□□□□ -0.43
FARP1-239ENST00000602171 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
FARP1-239ENST00000602171 PCDHGA10Q9Y5H3 936 aa12.36□□□□□ -0.43
FARP1-239ENST00000602171 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
FARP1-239ENST00000602171 BHMG1C9JSJ3 638 aaPredicted RBP12.35□□□□□ -0.43
FARP1-239ENST00000602171 TDRD9Q8NDG6 1382 aaKnown RBP12.34□□□□□ -0.43
FARP1-239ENST00000602171 PPP1R3GB7ZBB8 358 aa12.34□□□□□ -0.43
FARP1-239ENST00000602171 MRPL50Q8N5N7 158 aaKnown RBP12.34□□□□□ -0.43
FARP1-239ENST00000602171 EPAS1Q99814 870 aa12.34□□□□□ -0.43
FARP1-239ENST00000602171 ZNF608Q9ULD9 1512 aaPredicted RBP12.33□□□□□ -0.44
FARP1-239ENST00000602171 KIF27Q86VH2 1401 aa12.32□□□□□ -0.44
FARP1-239ENST00000602171 AQRO60306 1485 aaKnown RBP eCLIP12.32□□□□□ -0.44
FARP1-239ENST00000602171 GAPVD1Q14C86 1478 aa12.32□□□□□ -0.44
FARP1-239ENST00000602171 DPYSL4O14531 572 aa12.3□□□□□ -0.44
FARP1-239ENST00000602171 GRIN2BQ13224 1484 aa12.29□□□□□ -0.44
FARP1-239ENST00000602171 EIF4G3O43432 1585 aaKnown RBP12.29□□□□□ -0.44
FARP1-239ENST00000602171 WNT2BQ93097 391 aa12.28□□□□□ -0.44
FARP1-239ENST00000602171 RABGEF1Q9UJ41 708 aa12.28□□□□□ -0.44
FARP1-239ENST00000602171 PTPN5P54829 565 aa12.26□□□□□ -0.45
FARP1-239ENST00000602171 THSD4Q6ZMP0 1018 aa12.26□□□□□ -0.45
FARP1-239ENST00000602171 ABCA5Q8WWZ7 1642 aa12.26□□□□□ -0.45
FARP1-239ENST00000602171 ONECUT3O60422 494 aaPredicted RBP12.25□□□□□ -0.45
FARP1-239ENST00000602171 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
FARP1-239ENST00000602171 EEA1Q15075 1411 aa12.24□□□□□ -0.45
FARP1-239ENST00000602171 ERICH3Q5RHP9 1530 aa12.24□□□□□ -0.45
FARP1-239ENST00000602171 MAGI1Q96QZ7 1491 aaPredicted RBP12.24□□□□□ -0.45
FARP1-239ENST00000602171 C6orf132Q5T0Z8 1188 aa12.23□□□□□ -0.45
FARP1-239ENST00000602171 COL9A1P20849 921 aa12.22□□□□□ -0.45
FARP1-239ENST00000602171 LAPTM4BQ86VI4 370 aa12.22□□□□□ -0.45
FARP1-239ENST00000602171 WDR70Q9NW82 654 aa12.22□□□□□ -0.45
FARP1-239ENST00000602171 SNAPC4Q5SXM2 1469 aa12.21□□□□□ -0.45
FARP1-239ENST00000602171 PDIA6Q15084 440 aa12.21□□□□□ -0.45
FARP1-239ENST00000602171 PAXIP1Q6ZW49 1069 aaPredicted RBP12.21□□□□□ -0.45
FARP1-239ENST00000602171 CHMP7Q8WUX9 453 aaPredicted RBP12.21□□□□□ -0.45
FARP1-239ENST00000602171 IGF1RP08069 1367 aa12.2□□□□□ -0.46
FARP1-239ENST00000602171 E2F4Q16254 413 aa12.2□□□□□ -0.46
FARP1-239ENST00000602171 PROX2Q3B8N5 592 aa12.2□□□□□ -0.46
FARP1-239ENST00000602171 ANKK1Q8NFD2 765 aa12.2□□□□□ -0.46
FARP1-239ENST00000602171 CFAP44Q96MT7 982 aa12.2□□□□□ -0.46
FARP1-239ENST00000602171 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
FARP1-239ENST00000602171 PBRM1Q86U86 1689 aa12.19□□□□□ -0.46
FARP1-239ENST00000602171 DDX12PQ92771 950 aa12.19□□□□□ -0.46
FARP1-239ENST00000602171 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
FARP1-239ENST00000602171 SYNJ2O15056 1496 aa12.18□□□□□ -0.46
FARP1-239ENST00000602171 KIAA1468Q9P260 1216 aa12.17□□□□□ -0.46
FARP1-239ENST00000602171 ARIH1Q9Y4X5 557 aaPredicted RBP12.17□□□□□ -0.46
FARP1-239ENST00000602171 RBM33Q96EV2 1170 aaKnown RBP12.16□□□□□ -0.46
FARP1-239ENST00000602171 CARMIL1Q5VZK9 1371 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms