RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 ZMYM4Q5VZL5 1548 aa21.05■□□□□ 0.96
ZNF548-212ENST00000602086 PTPRMP28827 1452 aa21.05■□□□□ 0.96
ZNF548-212ENST00000602086 RIMS1Q86UR5 1692 aaKnown RBP21.03■□□□□ 0.96
ZNF548-212ENST00000602086 DHX29Q7Z478 1369 aaKnown RBP21.03■□□□□ 0.96
ZNF548-212ENST00000602086 TIMELESSQ9UNS1 1208 aa21.02■□□□□ 0.96
ZNF548-212ENST00000602086 ARHGEF40Q8TER5 1519 aa21.02■□□□□ 0.96
ZNF548-212ENST00000602086 DEPDC5O75140 1603 aa21■□□□□ 0.95
ZNF548-212ENST00000602086 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
ZNF548-212ENST00000602086 NUP155O75694 1391 aa20.99■□□□□ 0.95
ZNF548-212ENST00000602086 SIGLEC1Q9BZZ2 1709 aa20.98■□□□□ 0.95
ZNF548-212ENST00000602086 SLC4A1APQ9BWU0 796 aaKnown RBP20.98■□□□□ 0.95
ZNF548-212ENST00000602086 A2MP01023 1474 aa20.97■□□□□ 0.95
ZNF548-212ENST00000602086 ABCA6Q8N139 1617 aa20.96■□□□□ 0.95
ZNF548-212ENST00000602086 FAM135AQ9P2D6 1515 aa20.96■□□□□ 0.95
ZNF548-212ENST00000602086 ARID4BQ4LE39 1312 aaPredicted RBP20.96■□□□□ 0.95
ZNF548-212ENST00000602086 ANKRD30BQ9BXX2 1392 aa20.95■□□□□ 0.94
ZNF548-212ENST00000602086 DIP2CQ9Y2E4 1556 aa20.94■□□□□ 0.94
ZNF548-212ENST00000602086 RNF17Q9BXT8 1623 aaKnown RBP20.93■□□□□ 0.94
ZNF548-212ENST00000602086 VWDEQ8N2E2 1590 aa20.93■□□□□ 0.94
ZNF548-212ENST00000602086 MYT1LQ9UL68 1186 aa20.92■□□□□ 0.94
ZNF548-212ENST00000602086 PRDM15P57071 1507 aaPredicted RBP20.92■□□□□ 0.94
ZNF548-212ENST00000602086 REREQ9P2R6 1566 aa20.92■□□□□ 0.94
ZNF548-212ENST00000602086 LMTK3Q96Q04 1460 aa20.9■□□□□ 0.94
ZNF548-212ENST00000602086 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
ZNF548-212ENST00000602086 MROH1Q8NDA8 1641 aa20.89■□□□□ 0.93
ZNF548-212ENST00000602086 PKD2Q13563 968 aa20.88■□□□□ 0.93
ZNF548-212ENST00000602086 FER1L4A9Z1Z3 1794 aa20.87■□□□□ 0.93
ZNF548-212ENST00000602086 KANK1Q14678 1352 aa20.87■□□□□ 0.93
ZNF548-212ENST00000602086 SIN3AQ96ST3 1273 aa20.87■□□□□ 0.93
ZNF548-212ENST00000602086 YEATS2Q9ULM3 1422 aa20.86■□□□□ 0.93
ZNF548-212ENST00000602086 LMTK2Q8IWU2 1503 aa20.85■□□□□ 0.93
ZNF548-212ENST00000602086 KIF3BO15066 747 aa20.85■□□□□ 0.93
ZNF548-212ENST00000602086 ATP10AO60312 1499 aa20.85■□□□□ 0.93
ZNF548-212ENST00000602086 RPRD2Q5VT52 1461 aaKnown RBP20.85■□□□□ 0.93
ZNF548-212ENST00000602086 TET3O43151 1660 aa20.85■□□□□ 0.93
ZNF548-212ENST00000602086 AGLP35573 1532 aa20.83■□□□□ 0.93
ZNF548-212ENST00000602086 NEUROD1Q13562 356 aa20.81■□□□□ 0.92
ZNF548-212ENST00000602086 FBXO41Q8TF61 875 aa20.81■□□□□ 0.92
ZNF548-212ENST00000602086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.81■□□□□ 0.92
ZNF548-212ENST00000602086 TONSLQ96HA7 1378 aa20.8■□□□□ 0.92
ZNF548-212ENST00000602086 FOXD1Q16676 465 aa20.79■□□□□ 0.92
ZNF548-212ENST00000602086 HSPA2P54652 639 aa20.78■□□□□ 0.92
ZNF548-212ENST00000602086 E9PCH4 1651 aa20.77■□□□□ 0.92
ZNF548-212ENST00000602086 ZC3H13Q5T200 1668 aaKnown RBP20.77■□□□□ 0.91
ZNF548-212ENST00000602086 MLECQ14165 292 aa20.76■□□□□ 0.91
ZNF548-212ENST00000602086 EFCAB6Q5THR3 1501 aa20.75■□□□□ 0.91
ZNF548-212ENST00000602086 PPP6R1Q9UPN7 881 aa20.75■□□□□ 0.91
ZNF548-212ENST00000602086 PTPRTO14522 1441 aa20.74■□□□□ 0.91
ZNF548-212ENST00000602086 PPP1R15AO75807 674 aaPredicted RBP20.74■□□□□ 0.91
ZNF548-212ENST00000602086 PLA2R1Q13018 1463 aa20.74■□□□□ 0.91
ZNF548-212ENST00000602086 CEP152O94986 1710 aa20.72■□□□□ 0.91
ZNF548-212ENST00000602086 ABCC3O15438 1527 aa20.72■□□□□ 0.91
ZNF548-212ENST00000602086 SPHKAPQ2M3C7 1700 aa20.71■□□□□ 0.91
ZNF548-212ENST00000602086 TRPM2O94759 1503 aa20.71■□□□□ 0.91
ZNF548-212ENST00000602086 CCDC144AA2RUR9 1427 aa20.7■□□□□ 0.9
ZNF548-212ENST00000602086 ARHGAP31Q2M1Z3 1444 aa20.7■□□□□ 0.9
ZNF548-212ENST00000602086 PREX1Q8TCU6 1659 aa20.69■□□□□ 0.9
ZNF548-212ENST00000602086 NEURL4Q96JN8 1562 aa20.68■□□□□ 0.9
ZNF548-212ENST00000602086 GGT6Q6P531 493 aa20.67■□□□□ 0.9
ZNF548-212ENST00000602086 CAMSAP1Q5T5Y3 1602 aa20.67■□□□□ 0.9
ZNF548-212ENST00000602086 WASHC2CQ9Y4E1 1318 aa20.65■□□□□ 0.9
ZNF548-212ENST00000602086 L3MBTL2Q969R5 705 aa20.65■□□□□ 0.9
ZNF548-212ENST00000602086 NPATQ14207 1427 aa20.61■□□□□ 0.89
ZNF548-212ENST00000602086 CNTLNQ9NXG0 1405 aa20.61■□□□□ 0.89
ZNF548-212ENST00000602086 STRCQ7RTU9 1775 aa20.59■□□□□ 0.89
ZNF548-212ENST00000602086 CEBPAP49715 358 aaPredicted RBP20.59■□□□□ 0.89
ZNF548-212ENST00000602086 NOS1P29475 1434 aa20.59■□□□□ 0.89
ZNF548-212ENST00000602086 UHRF1BP1Q6BDS2 1440 aa20.59■□□□□ 0.89
ZNF548-212ENST00000602086 CLTCL1P53675 1640 aa20.58■□□□□ 0.89
ZNF548-212ENST00000602086 SPATA31E1Q6ZUB1 1445 aa20.57■□□□□ 0.88
ZNF548-212ENST00000602086 STAC3Q96MF2 364 aa20.57■□□□□ 0.88
ZNF548-212ENST00000602086 C3P01024 1663 aa20.57■□□□□ 0.88
ZNF548-212ENST00000602086 ZNF316A6NFI3 1004 aaPredicted RBP20.55■□□□□ 0.88
ZNF548-212ENST00000602086 KIF1BO60333 1816 aa20.54■□□□□ 0.88
ZNF548-212ENST00000602086 PIK3C2BO00750 1634 aa20.53■□□□□ 0.88
ZNF548-212ENST00000602086 CERKQ8TCT0 537 aa20.52■□□□□ 0.88
ZNF548-212ENST00000602086 CLTCQ00610 1675 aaKnown RBP20.51■□□□□ 0.87
ZNF548-212ENST00000602086 MROH2AA6NES4 1674 aa20.5■□□□□ 0.87
ZNF548-212ENST00000602086 SYNMO15061 1565 aa20.49■□□□□ 0.87
ZNF548-212ENST00000602086 CFAP65Q6ZU64 1925 aaKnown RBP20.47■□□□□ 0.87
ZNF548-212ENST00000602086 SETD1BQ9UPS6 1966 aaKnown RBP20.47■□□□□ 0.87
ZNF548-212ENST00000602086 NBPF8Q3BBV2 869 aa20.47■□□□□ 0.87
ZNF548-212ENST00000602086 SLC52A1Q9NWF4 448 aa20.47■□□□□ 0.87
ZNF548-212ENST00000602086 ADGRB3O60242 1522 aa20.47■□□□□ 0.87
ZNF548-212ENST00000602086 SPATA31D1Q6ZQQ2 1576 aa20.46■□□□□ 0.87
ZNF548-212ENST00000602086 ERVK-7P63135 1459 aa20.46■□□□□ 0.87
ZNF548-212ENST00000602086 RALGAPBQ86X10 1494 aa20.45■□□□□ 0.86
ZNF548-212ENST00000602086 DCAF11Q8TEB1 546 aa20.45■□□□□ 0.86
ZNF548-212ENST00000602086 UGGT1Q9NYU2 1555 aa20.45■□□□□ 0.86
ZNF548-212ENST00000602086 PRAG1Q86YV5 1406 aa20.44■□□□□ 0.86
ZNF548-212ENST00000602086 ESF1Q9H501 851 aaKnown RBP20.43■□□□□ 0.86
ZNF548-212ENST00000602086 IFT172Q9UG01 1749 aa20.43■□□□□ 0.86
ZNF548-212ENST00000602086 MYOM2P54296 1465 aa20.42■□□□□ 0.86
ZNF548-212ENST00000602086 RGL3Q3MIN7 710 aa20.41■□□□□ 0.86
ZNF548-212ENST00000602086 RPGRIP1LQ68CZ1 1315 aa20.41■□□□□ 0.86
ZNF548-212ENST00000602086 ZMYM3Q14202 1370 aa20.41■□□□□ 0.86
ZNF548-212ENST00000602086 TRPM1Q7Z4N2 1603 aa20.4■□□□□ 0.86
ZNF548-212ENST00000602086 LAMC1P11047 1609 aa20.38■□□□□ 0.85
ZNF548-212ENST00000602086 KIAA1210Q9ULL0 1709 aa20.38■□□□□ 0.85
ZNF548-212ENST00000602086 GPRASP1Q5JY77 1395 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms