RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ADAMTSL3P82987 1691 aa33.07■■■□□ 2.89
CHMP2A-204ENST00000597848 WASHC2CQ9Y4E1 1318 aa33.07■■■□□ 2.88
CHMP2A-204ENST00000597848 GCC2Q8IWJ2 1684 aa33.07■■■□□ 2.88
CHMP2A-204ENST00000597848 SETD5Q9C0A6 1442 aa33.06■■■□□ 2.88
CHMP2A-204ENST00000597848 RNF17Q9BXT8 1623 aaKnown RBP33.06■■■□□ 2.88
CHMP2A-204ENST00000597848 KANK1Q14678 1352 aa33.05■■■□□ 2.88
CHMP2A-204ENST00000597848 MADDQ8WXG6 1647 aa33.04■■■□□ 2.88
CHMP2A-204ENST00000597848 PLPPR3Q6T4P5 718 aa33.01■■■□□ 2.87
CHMP2A-204ENST00000597848 TRIM52Q96A61 297 aa33■■■□□ 2.87
CHMP2A-204ENST00000597848 CNTLNQ9NXG0 1405 aa33■■■□□ 2.87
CHMP2A-204ENST00000597848 FER1L4A9Z1Z3 1794 aa32.99■■■□□ 2.87
CHMP2A-204ENST00000597848 MROH1Q8NDA8 1641 aa32.99■■■□□ 2.87
CHMP2A-204ENST00000597848 NUP155O75694 1391 aa32.97■■■□□ 2.87
CHMP2A-204ENST00000597848 DEPDC5O75140 1603 aa32.97■■■□□ 2.87
CHMP2A-204ENST00000597848 PRDM15P57071 1507 aaPredicted RBP32.97■■■□□ 2.87
CHMP2A-204ENST00000597848 RIMS1Q86UR5 1692 aaKnown RBP32.96■■■□□ 2.87
CHMP2A-204ENST00000597848 KDM5DQ9BY66 1539 aa32.96■■■□□ 2.87
CHMP2A-204ENST00000597848 RAB3GAP2Q9H2M9 1393 aa32.95■■■□□ 2.86
CHMP2A-204ENST00000597848 CEBPAP49715 358 aaPredicted RBP32.93■■■□□ 2.86
CHMP2A-204ENST00000597848 CLTCQ00610 1675 aaKnown RBP32.93■■■□□ 2.86
CHMP2A-204ENST00000597848 ZMYM3Q14202 1370 aa32.93■■■□□ 2.86
CHMP2A-204ENST00000597848 FAM135AQ9P2D6 1515 aa32.92■■■□□ 2.86
CHMP2A-204ENST00000597848 UNC13BO14795 1591 aa32.92■■■□□ 2.86
CHMP2A-204ENST00000597848 PTPRMP28827 1452 aa32.92■■■□□ 2.86
CHMP2A-204ENST00000597848 ABCC3O15438 1527 aa32.92■■■□□ 2.86
CHMP2A-204ENST00000597848 PCGF6Q9BYE7 350 aa32.91■■■□□ 2.86
CHMP2A-204ENST00000597848 ACIN1Q9UKV3 1341 aaKnown RBP32.87■■■□□ 2.85
CHMP2A-204ENST00000597848 VWDEQ8N2E2 1590 aa32.87■■■□□ 2.85
CHMP2A-204ENST00000597848 ZC3H13Q5T200 1668 aaKnown RBP32.85■■■□□ 2.85
CHMP2A-204ENST00000597848 CEP152O94986 1710 aa32.85■■■□□ 2.85
CHMP2A-204ENST00000597848 HRCP23327 699 aa32.84■■■□□ 2.85
CHMP2A-204ENST00000597848 MROH2AA6NES4 1674 aa32.82■■■□□ 2.84
CHMP2A-204ENST00000597848 LMTK2Q8IWU2 1503 aa32.82■■■□□ 2.84
CHMP2A-204ENST00000597848 IQGAP3Q86VI3 1631 aa32.8■■■□□ 2.84
CHMP2A-204ENST00000597848 AEBP2Q6ZN18 517 aaPredicted RBP32.79■■■□□ 2.84
CHMP2A-204ENST00000597848 SLC4A1APQ9BWU0 796 aaKnown RBP32.79■■■□□ 2.84
CHMP2A-204ENST00000597848 CAMSAP1Q5T5Y3 1602 aa32.78■■■□□ 2.84
CHMP2A-204ENST00000597848 FBXO31Q5XUX0 539 aaPredicted RBP32.78■■■□□ 2.84
CHMP2A-204ENST00000597848 C3P01024 1663 aa32.78■■■□□ 2.84
CHMP2A-204ENST00000597848 PZPP20742 1482 aa32.75■■■□□ 2.83
CHMP2A-204ENST00000597848 ARHGAP31Q2M1Z3 1444 aa32.75■■■□□ 2.83
CHMP2A-204ENST00000597848 MPHOSPH9Q99550 1183 aa32.73■■■□□ 2.83
CHMP2A-204ENST00000597848 TET3O43151 1660 aa32.72■■■□□ 2.83
CHMP2A-204ENST00000597848 NPATQ14207 1427 aa32.72■■■□□ 2.83
CHMP2A-204ENST00000597848 EFCAB6Q5THR3 1501 aa32.72■■■□□ 2.83
CHMP2A-204ENST00000597848 PKD2Q13563 968 aa32.71■■■□□ 2.83
CHMP2A-204ENST00000597848 TNRQ92752 1358 aa32.65■■■□□ 2.82
CHMP2A-204ENST00000597848 RPRD2Q5VT52 1461 aaKnown RBP32.65■■■□□ 2.82
CHMP2A-204ENST00000597848 ERVK-7P63135 1459 aa32.64■■■□□ 2.82
CHMP2A-204ENST00000597848 CFAP65Q6ZU64 1925 aaKnown RBP32.63■■■□□ 2.81
CHMP2A-204ENST00000597848 FOXD1Q16676 465 aa32.62■■■□□ 2.81
CHMP2A-204ENST00000597848 E9PCH4 1651 aa32.62■■■□□ 2.81
CHMP2A-204ENST00000597848 SPATA31D1Q6ZQQ2 1576 aa32.58■■■□□ 2.81
CHMP2A-204ENST00000597848 PREX1Q8TCU6 1659 aa32.57■■■□□ 2.8
CHMP2A-204ENST00000597848 NOS1P29475 1434 aa32.56■■■□□ 2.8
CHMP2A-204ENST00000597848 SETD1BQ9UPS6 1966 aaKnown RBP32.54■■■□□ 2.8
CHMP2A-204ENST00000597848 UHRF1BP1Q6BDS2 1440 aa32.53■■■□□ 2.8
CHMP2A-204ENST00000597848 SLC52A1Q9NWF4 448 aa32.5■■■□□ 2.79
CHMP2A-204ENST00000597848 IDI1Q13907 227 aa32.49■■■□□ 2.79
CHMP2A-204ENST00000597848 PTPRTO14522 1441 aa32.49■■■□□ 2.79
CHMP2A-204ENST00000597848 SYNMO15061 1565 aa32.47■■■□□ 2.79
CHMP2A-204ENST00000597848 NLRP1Q9C000 1473 aa32.47■■■□□ 2.79
CHMP2A-204ENST00000597848 MYO3AQ8NEV4 1616 aa32.45■■■□□ 2.79
CHMP2A-204ENST00000597848 STAG3Q9UJ98 1225 aa32.45■■■□□ 2.79
CHMP2A-204ENST00000597848 PLA2R1Q13018 1463 aa32.43■■■□□ 2.78
CHMP2A-204ENST00000597848 SPHKAPQ2M3C7 1700 aa32.43■■■□□ 2.78
CHMP2A-204ENST00000597848 A2ML1A8K2U0 1454 aa32.42■■■□□ 2.78
CHMP2A-204ENST00000597848 CHGAP10645 457 aaKnown RBP32.42■■■□□ 2.78
CHMP2A-204ENST00000597848 DHX57Q6P158 1386 aaKnown RBP32.4■■■□□ 2.78
CHMP2A-204ENST00000597848 UGGT1Q9NYU2 1555 aa32.4■■■□□ 2.78
CHMP2A-204ENST00000597848 LMTK3Q96Q04 1460 aa32.39■■■□□ 2.78
CHMP2A-204ENST00000597848 TRPM2O94759 1503 aa32.39■■■□□ 2.78
CHMP2A-204ENST00000597848 CEP170BQ9Y4F5 1589 aaPredicted RBP32.39■■■□□ 2.78
CHMP2A-204ENST00000597848 HSPA2P54652 639 aa32.38■■■□□ 2.77
CHMP2A-204ENST00000597848 THEMISQ8N1K5 641 aaPredicted RBP32.36■■■□□ 2.77
CHMP2A-204ENST00000597848 CCDC144AA2RUR9 1427 aa32.35■■■□□ 2.77
CHMP2A-204ENST00000597848 ANKRD30BQ9BXX2 1392 aa32.35■■■□□ 2.77
CHMP2A-204ENST00000597848 PIK3C2BO00750 1634 aa32.33■■■□□ 2.77
CHMP2A-204ENST00000597848 ZNF142P52746 1687 aaPredicted RBP32.31■■■□□ 2.76
CHMP2A-204ENST00000597848 CLTCL1P53675 1640 aa32.3■■■□□ 2.76
CHMP2A-204ENST00000597848 ADGRB3O60242 1522 aa32.26■■■□□ 2.76
CHMP2A-204ENST00000597848 ZNF326Q5BKZ1 582 aaKnown RBP32.25■■■□□ 2.75
CHMP2A-204ENST00000597848 UBR1Q8IWV7 1749 aa32.24■■■□□ 2.75
CHMP2A-204ENST00000597848 TMEM131LA2VDJ0 1609 aa32.22■■■□□ 2.75
CHMP2A-204ENST00000597848 RGL3Q3MIN7 710 aa32.2■■■□□ 2.75
CHMP2A-204ENST00000597848 TMEM2Q9UHN6 1383 aa32.19■■■□□ 2.74
CHMP2A-204ENST00000597848 ANKLE2Q86XL3 938 aa32.19■■■□□ 2.74
CHMP2A-204ENST00000597848 KDM5AP29375 1690 aaKnown RBP32.18■■■□□ 2.74
CHMP2A-204ENST00000597848 CCER1Q8TC90 406 aaPredicted RBP32.18■■■□□ 2.74
CHMP2A-204ENST00000597848 EID1Q9Y6B2 187 aa32.18■■■□□ 2.74
CHMP2A-204ENST00000597848 KIF1BO60333 1816 aa32.17■■■□□ 2.74
CHMP2A-204ENST00000597848 HDGFP51858 240 aaKnown RBP32.17■■■□□ 2.74
CHMP2A-204ENST00000597848 TXNDC2Q86VQ3 553 aa32.17■■■□□ 2.74
CHMP2A-204ENST00000597848 SIN3AQ96ST3 1273 aa32.17■■■□□ 2.74
CHMP2A-204ENST00000597848 NEUROD1Q13562 356 aa32.16■■■□□ 2.74
CHMP2A-204ENST00000597848 NCKAP5LQ9HCH0 1330 aa32.16■■■□□ 2.74
CHMP2A-204ENST00000597848 NUTM2DQ5VT03 806 aaPredicted RBP32.13■■■□□ 2.73
CHMP2A-204ENST00000597848 MYO5BQ9ULV0 1848 aa32.13■■■□□ 2.73
CHMP2A-204ENST00000597848 RIMS2Q9UQ26 1411 aa32.13■■■□□ 2.73
CHMP2A-204ENST00000597848 SPATA31E1Q6ZUB1 1445 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms