RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 FER1L4A9Z1Z3 1794 aa12.02□□□□□ -0.48
SIN3B-208ENST00000596638 AGLP35573 1532 aa12.02□□□□□ -0.48
SIN3B-208ENST00000596638 REREQ9P2R6 1566 aa12.02□□□□□ -0.49
SIN3B-208ENST00000596638 CERKQ8TCT0 537 aa12.02□□□□□ -0.49
SIN3B-208ENST00000596638 ITSN2Q9NZM3 1697 aa12.02□□□□□ -0.49
SIN3B-208ENST00000596638 ZMYM3Q14202 1370 aa12.02□□□□□ -0.49
SIN3B-208ENST00000596638 TONSLQ96HA7 1378 aa12.02□□□□□ -0.49
SIN3B-208ENST00000596638 MBD5Q9P267 1494 aa12.02□□□□□ -0.49
SIN3B-208ENST00000596638 EHBP1L1Q8N3D4 1523 aa12.01□□□□□ -0.49
SIN3B-208ENST00000596638 NEFLP07196 543 aa12.01□□□□□ -0.49
SIN3B-208ENST00000596638 GGT6Q6P531 493 aa12.01□□□□□ -0.49
SIN3B-208ENST00000596638 DISP3Q9P2K9 1392 aa12.01□□□□□ -0.49
SIN3B-208ENST00000596638 MYOM3Q5VTT5 1437 aa12.01□□□□□ -0.49
SIN3B-208ENST00000596638 SYCP2Q9BX26 1530 aa12.01□□□□□ -0.49
SIN3B-208ENST00000596638 NAIPQ13075 1403 aa12□□□□□ -0.49
SIN3B-208ENST00000596638 TCOF1Q13428 1488 aaKnown RBP12□□□□□ -0.49
SIN3B-208ENST00000596638 SUPT6HQ7KZ85 1726 aaKnown RBP12□□□□□ -0.49
SIN3B-208ENST00000596638 FKBP8Q14318 412 aa11.99□□□□□ -0.49
SIN3B-208ENST00000596638 ESF1Q9H501 851 aaKnown RBP11.99□□□□□ -0.49
SIN3B-208ENST00000596638 NCOA2Q15596 1464 aa11.98□□□□□ -0.49
SIN3B-208ENST00000596638 ERICH6BQ5W0A0 696 aa11.98□□□□□ -0.49
SIN3B-208ENST00000596638 PTPRKQ15262 1439 aa11.97□□□□□ -0.49
SIN3B-208ENST00000596638 SETD1BQ9UPS6 1966 aaKnown RBP11.97□□□□□ -0.49
SIN3B-208ENST00000596638 STRCQ7RTU9 1775 aa11.97□□□□□ -0.49
SIN3B-208ENST00000596638 UHRF1BP1Q6BDS2 1440 aa11.96□□□□□ -0.49
SIN3B-208ENST00000596638 C3P01024 1663 aa11.96□□□□□ -0.5
SIN3B-208ENST00000596638 GCC2Q8IWJ2 1684 aa11.96□□□□□ -0.5
SIN3B-208ENST00000596638 A2MP01023 1474 aa11.95□□□□□ -0.5
SIN3B-208ENST00000596638 NCKAP5LQ9HCH0 1330 aa11.95□□□□□ -0.5
SIN3B-208ENST00000596638 FBXO31Q5XUX0 539 aaPredicted RBP11.95□□□□□ -0.5
SIN3B-208ENST00000596638 PLEKHH2Q8IVE3 1493 aa11.95□□□□□ -0.5
SIN3B-208ENST00000596638 DHX29Q7Z478 1369 aaKnown RBP11.94□□□□□ -0.5
SIN3B-208ENST00000596638 DMRT2Q9Y5R5 561 aa11.94□□□□□ -0.5
SIN3B-208ENST00000596638 ATP7AQ04656 1500 aa11.94□□□□□ -0.5
SIN3B-208ENST00000596638 KIF3BO15066 747 aa11.93□□□□□ -0.5
SIN3B-208ENST00000596638 PREX1Q8TCU6 1659 aa11.93□□□□□ -0.5
SIN3B-208ENST00000596638 MIA2Q96PC5 1412 aa11.93□□□□□ -0.5
SIN3B-208ENST00000596638 CNTLNQ9NXG0 1405 aa11.93□□□□□ -0.5
SIN3B-208ENST00000596638 RTEL1-TNFRSF6BF6WH68 1400 aa11.92□□□□□ -0.5
SIN3B-208ENST00000596638 RSPH4AQ5TD94 716 aa11.91□□□□□ -0.5
SIN3B-208ENST00000596638 PLXNC1O60486 1568 aa11.91□□□□□ -0.5
SIN3B-208ENST00000596638 INO80Q9ULG1 1556 aaPredicted RBP11.91□□□□□ -0.5
SIN3B-208ENST00000596638 PTPRTO14522 1441 aa11.9□□□□□ -0.5
SIN3B-208ENST00000596638 SPATA31D1Q6ZQQ2 1576 aa11.89□□□□□ -0.51
SIN3B-208ENST00000596638 NPATQ14207 1427 aa11.89□□□□□ -0.51
SIN3B-208ENST00000596638 MAPK8IP2Q13387 824 aaPredicted RBP11.89□□□□□ -0.51
SIN3B-208ENST00000596638 NCOA1Q15788 1441 aa11.88□□□□□ -0.51
SIN3B-208ENST00000596638 RBM19Q9Y4C8 960 aaKnown RBP11.88□□□□□ -0.51
SIN3B-208ENST00000596638 TSPY4P0CV99 314 aa11.87□□□□□ -0.51
SIN3B-208ENST00000596638 TSPY10P0CW01 314 aa11.87□□□□□ -0.51
SIN3B-208ENST00000596638 CAMSAP2Q08AD1 1489 aa11.87□□□□□ -0.51
SIN3B-208ENST00000596638 ROCK1Q13464 1354 aa11.86□□□□□ -0.51
SIN3B-208ENST00000596638 CLTCQ00610 1675 aaKnown RBP11.86□□□□□ -0.51
SIN3B-208ENST00000596638 LTBP4Q8N2S1 1624 aa11.86□□□□□ -0.51
SIN3B-208ENST00000596638 ZNF335Q9H4Z2 1342 aaPredicted RBP11.86□□□□□ -0.51
SIN3B-208ENST00000596638 WASHC2CQ9Y4E1 1318 aa11.86□□□□□ -0.51
SIN3B-208ENST00000596638 BCANQ96GW7 911 aa11.85□□□□□ -0.51
SIN3B-208ENST00000596638 CAMSAP1Q5T5Y3 1602 aa11.85□□□□□ -0.51
SIN3B-208ENST00000596638 FANCIQ9NVI1 1328 aa11.85□□□□□ -0.51
SIN3B-208ENST00000596638 CCDC141Q6ZP82 1450 aa11.84□□□□□ -0.51
SIN3B-208ENST00000596638 TRIM52Q96A61 297 aa11.84□□□□□ -0.51
SIN3B-208ENST00000596638 HSPA5P11021 654 aaKnown RBP11.83□□□□□ -0.52
SIN3B-208ENST00000596638 EIF4G2P78344 907 aaKnown RBP eCLIP11.83□□□□□ -0.527e-7■■■■■ 42.5
SIN3B-208ENST00000596638 PKD2Q13563 968 aa11.83□□□□□ -0.52
SIN3B-208ENST00000596638 HIRIP3Q9BW71 556 aaPredicted RBP11.83□□□□□ -0.52
SIN3B-208ENST00000596638 MROH2AA6NES4 1674 aa11.83□□□□□ -0.52
SIN3B-208ENST00000596638 WASHC2AQ641Q2 1341 aa11.83□□□□□ -0.52
SIN3B-208ENST00000596638 ADGBQ8N7X0 1667 aa11.81□□□□□ -0.52
SIN3B-208ENST00000596638 POLR1AO95602 1720 aaPredicted RBP11.81□□□□□ -0.52
SIN3B-208ENST00000596638 RRP7BPQ9NSQ0 103 aa11.8□□□□□ -0.52
SIN3B-208ENST00000596638 TNRQ92752 1358 aa11.79□□□□□ -0.52
SIN3B-208ENST00000596638 CCDC7Q96M83 1385 aa11.79□□□□□ -0.52
SIN3B-208ENST00000596638 ARHGEF5Q12774 1597 aa11.79□□□□□ -0.52
SIN3B-208ENST00000596638 RPRD2Q5VT52 1461 aaKnown RBP11.79□□□□□ -0.52
SIN3B-208ENST00000596638 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
SIN3B-208ENST00000596638 ABCC5O15440 1437 aa11.78□□□□□ -0.52
SIN3B-208ENST00000596638 A2ML1A8K2U0 1454 aa11.78□□□□□ -0.52
SIN3B-208ENST00000596638 HNRNPUQ00839 825 aaKnown RBP eCLIP11.78□□□□□ -0.52
SIN3B-208ENST00000596638 PPP4R2Q9NY27 417 aa11.78□□□□□ -0.52
SIN3B-208ENST00000596638 CHIC2Q9UKJ5 165 aa11.78□□□□□ -0.52
SIN3B-208ENST00000596638 CEP170BQ9Y4F5 1589 aaPredicted RBP11.78□□□□□ -0.52
SIN3B-208ENST00000596638 ANKRD30BQ9BXX2 1392 aa11.78□□□□□ -0.52
SIN3B-208ENST00000596638 PLA2R1Q13018 1463 aa11.77□□□□□ -0.52
SIN3B-208ENST00000596638 DNMT1P26358 1616 aaKnown RBP11.77□□□□□ -0.53
SIN3B-208ENST00000596638 SPATA31E1Q6ZUB1 1445 aa11.77□□□□□ -0.53
SIN3B-208ENST00000596638 PZPP20742 1482 aa11.76□□□□□ -0.53
SIN3B-208ENST00000596638 THEMISQ8N1K5 641 aaPredicted RBP11.76□□□□□ -0.53
SIN3B-208ENST00000596638 ZBED9Q6R2W3 1325 aa11.76□□□□□ -0.53
SIN3B-208ENST00000596638 MYO3AQ8NEV4 1616 aa11.75□□□□□ -0.53
SIN3B-208ENST00000596638 ANKLE2Q86XL3 938 aa11.75□□□□□ -0.53
SIN3B-208ENST00000596638 L3MBTL2Q969R5 705 aa11.75□□□□□ -0.53
SIN3B-208ENST00000596638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.75□□□□□ -0.533e-6■□□□□ 10.6
SIN3B-208ENST00000596638 PRKRIP1Q9H875 184 aaPredicted RBP11.75□□□□□ -0.53
SIN3B-208ENST00000596638 DAPK1P53355 1430 aa11.75□□□□□ -0.53
SIN3B-208ENST00000596638 UBAP1LF5GYI3 381 aa11.74□□□□□ -0.53
SIN3B-208ENST00000596638 KDM5DQ9BY66 1539 aa11.74□□□□□ -0.53
SIN3B-208ENST00000596638 LTKP29376 864 aa11.73□□□□□ -0.53
SIN3B-208ENST00000596638 MAST1Q9Y2H9 1570 aa11.73□□□□□ -0.53
SIN3B-208ENST00000596638 ZNF142P52746 1687 aaPredicted RBP11.72□□□□□ -0.53
SIN3B-208ENST00000596638 MROH1Q8NDA8 1641 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 391.1 ms