RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 RNF17Q9BXT8 1623 aaKnown RBP22.41■■□□□ 1.18
DDX49-204ENST00000595858 GCC2Q8IWJ2 1684 aa22.41■■□□□ 1.18
DDX49-204ENST00000595858 ESF1Q9H501 851 aaKnown RBP22.41■■□□□ 1.18
DDX49-204ENST00000595858 SETD5Q9C0A6 1442 aa22.39■■□□□ 1.17
DDX49-204ENST00000595858 WASHC2CQ9Y4E1 1318 aa22.39■■□□□ 1.17
DDX49-204ENST00000595858 MROH1Q8NDA8 1641 aa22.38■■□□□ 1.17
DDX49-204ENST00000595858 MADDQ8WXG6 1647 aa22.38■■□□□ 1.17
DDX49-204ENST00000595858 DEPDC5O75140 1603 aa22.37■■□□□ 1.17
DDX49-204ENST00000595858 PRDM15P57071 1507 aaPredicted RBP22.35■■□□□ 1.17
DDX49-204ENST00000595858 CNTLNQ9NXG0 1405 aa22.35■■□□□ 1.17
DDX49-204ENST00000595858 KANK1Q14678 1352 aa22.35■■□□□ 1.17
DDX49-204ENST00000595858 FER1L4A9Z1Z3 1794 aa22.35■■□□□ 1.17
DDX49-204ENST00000595858 KDM5DQ9BY66 1539 aa22.33■■□□□ 1.16
DDX49-204ENST00000595858 FAM135AQ9P2D6 1515 aa22.33■■□□□ 1.16
DDX49-204ENST00000595858 NUP155O75694 1391 aa22.32■■□□□ 1.16
DDX49-204ENST00000595858 RIMS1Q86UR5 1692 aaKnown RBP22.32■■□□□ 1.16
DDX49-204ENST00000595858 UNC13BO14795 1591 aa22.32■■□□□ 1.16
DDX49-204ENST00000595858 RAB3GAP2Q9H2M9 1393 aa22.32■■□□□ 1.16
DDX49-204ENST00000595858 VWDEQ8N2E2 1590 aa22.31■■□□□ 1.16
DDX49-204ENST00000595858 ABCC3O15438 1527 aa22.31■■□□□ 1.16
DDX49-204ENST00000595858 ZMYM3Q14202 1370 aa22.31■■□□□ 1.16
DDX49-204ENST00000595858 TRIM52Q96A61 297 aa22.3■■□□□ 1.16
DDX49-204ENST00000595858 CLTCQ00610 1675 aaKnown RBP22.3■■□□□ 1.16
DDX49-204ENST00000595858 PTPRMP28827 1452 aa22.3■■□□□ 1.16
DDX49-204ENST00000595858 CEBPAP49715 358 aaPredicted RBP22.29■■□□□ 1.16
DDX49-204ENST00000595858 HRCP23327 699 aa22.28■■□□□ 1.16
DDX49-204ENST00000595858 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
DDX49-204ENST00000595858 ACIN1Q9UKV3 1341 aaKnown RBP22.27■■□□□ 1.16
DDX49-204ENST00000595858 ZC3H13Q5T200 1668 aaKnown RBP22.26■■□□□ 1.15
DDX49-204ENST00000595858 LMTK2Q8IWU2 1503 aa22.26■■□□□ 1.15
DDX49-204ENST00000595858 PCGF6Q9BYE7 350 aa22.26■■□□□ 1.15
DDX49-204ENST00000595858 CEP152O94986 1710 aa22.26■■□□□ 1.15
DDX49-204ENST00000595858 MROH2AA6NES4 1674 aa22.25■■□□□ 1.15
DDX49-204ENST00000595858 IQGAP3Q86VI3 1631 aa22.23■■□□□ 1.15
DDX49-204ENST00000595858 C3P01024 1663 aa22.22■■□□□ 1.15
DDX49-204ENST00000595858 ARHGAP31Q2M1Z3 1444 aa22.21■■□□□ 1.15
DDX49-204ENST00000595858 CAMSAP1Q5T5Y3 1602 aa22.21■■□□□ 1.15
DDX49-204ENST00000595858 FBXO31Q5XUX0 539 aaPredicted RBP22.2■■□□□ 1.14
DDX49-204ENST00000595858 PZPP20742 1482 aa22.2■■□□□ 1.14
DDX49-204ENST00000595858 SLC4A1APQ9BWU0 796 aaKnown RBP22.2■■□□□ 1.14
DDX49-204ENST00000595858 NPATQ14207 1427 aa22.19■■□□□ 1.14
DDX49-204ENST00000595858 TET3O43151 1660 aa22.18■■□□□ 1.14
DDX49-204ENST00000595858 EFCAB6Q5THR3 1501 aa22.18■■□□□ 1.14
DDX49-204ENST00000595858 MPHOSPH9Q99550 1183 aa22.17■■□□□ 1.14
DDX49-204ENST00000595858 PKD2Q13563 968 aa22.15■■□□□ 1.14
DDX49-204ENST00000595858 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
DDX49-204ENST00000595858 RPRD2Q5VT52 1461 aaKnown RBP22.14■■□□□ 1.13
DDX49-204ENST00000595858 CFAP65Q6ZU64 1925 aaKnown RBP22.13■■□□□ 1.13
DDX49-204ENST00000595858 ERVK-7P63135 1459 aa22.12■■□□□ 1.13
DDX49-204ENST00000595858 E9PCH4 1651 aa22.11■■□□□ 1.13
DDX49-204ENST00000595858 SETD1BQ9UPS6 1966 aaKnown RBP22.11■■□□□ 1.13
DDX49-204ENST00000595858 TNRQ92752 1358 aa22.1■■□□□ 1.13
DDX49-204ENST00000595858 SPATA31D1Q6ZQQ2 1576 aa22.1■■□□□ 1.13
DDX49-204ENST00000595858 NOS1P29475 1434 aa22.09■■□□□ 1.13
DDX49-204ENST00000595858 PREX1Q8TCU6 1659 aa22.08■■□□□ 1.13
DDX49-204ENST00000595858 FOXD1Q16676 465 aa22.08■■□□□ 1.13
DDX49-204ENST00000595858 PTPRTO14522 1441 aa22.04■■□□□ 1.12
DDX49-204ENST00000595858 UHRF1BP1Q6BDS2 1440 aa22.02■■□□□ 1.12
DDX49-204ENST00000595858 SYNMO15061 1565 aa22.02■■□□□ 1.12
DDX49-204ENST00000595858 IDI1Q13907 227 aa22.02■■□□□ 1.12
DDX49-204ENST00000595858 SLC52A1Q9NWF4 448 aa22.02■■□□□ 1.12
DDX49-204ENST00000595858 PLA2R1Q13018 1463 aa22.01■■□□□ 1.11
DDX49-204ENST00000595858 NLRP1Q9C000 1473 aa22■■□□□ 1.11
DDX49-204ENST00000595858 SPHKAPQ2M3C7 1700 aa21.98■■□□□ 1.11
DDX49-204ENST00000595858 MYO3AQ8NEV4 1616 aa21.98■■□□□ 1.11
DDX49-204ENST00000595858 A2ML1A8K2U0 1454 aa21.97■■□□□ 1.11
DDX49-204ENST00000595858 DHX57Q6P158 1386 aaKnown RBP21.96■■□□□ 1.11
DDX49-204ENST00000595858 LMTK3Q96Q04 1460 aa21.96■■□□□ 1.11
DDX49-204ENST00000595858 TRPM2O94759 1503 aa21.96■■□□□ 1.11
DDX49-204ENST00000595858 UGGT1Q9NYU2 1555 aa21.95■■□□□ 1.1
DDX49-204ENST00000595858 ANKRD30BQ9BXX2 1392 aa21.94■■□□□ 1.1
DDX49-204ENST00000595858 CEP170BQ9Y4F5 1589 aaPredicted RBP21.94■■□□□ 1.1
DDX49-204ENST00000595858 PIK3C2BO00750 1634 aa21.93■■□□□ 1.1
DDX49-204ENST00000595858 STAG3Q9UJ98 1225 aa21.92■■□□□ 1.1
DDX49-204ENST00000595858 HSPA2P54652 639 aa21.92■■□□□ 1.1
DDX49-204ENST00000595858 ZNF142P52746 1687 aaPredicted RBP21.92■■□□□ 1.1
DDX49-204ENST00000595858 THEMISQ8N1K5 641 aaPredicted RBP21.91■■□□□ 1.1
DDX49-204ENST00000595858 CHGAP10645 457 aaKnown RBP21.9■■□□□ 1.1
DDX49-204ENST00000595858 CCDC144AA2RUR9 1427 aa21.9■■□□□ 1.1
DDX49-204ENST00000595858 CLTCL1P53675 1640 aa21.9■■□□□ 1.1
DDX49-204ENST00000595858 UBR1Q8IWV7 1749 aa21.86■■□□□ 1.09
DDX49-204ENST00000595858 ADGRB3O60242 1522 aa21.85■■□□□ 1.09
DDX49-204ENST00000595858 TMEM131LA2VDJ0 1609 aa21.84■■□□□ 1.09
DDX49-204ENST00000595858 KDM5AP29375 1690 aaKnown RBP21.84■■□□□ 1.09
DDX49-204ENST00000595858 TMEM2Q9UHN6 1383 aa21.81■■□□□ 1.08
DDX49-204ENST00000595858 KIF1BO60333 1816 aa21.8■■□□□ 1.08
DDX49-204ENST00000595858 ZNF326Q5BKZ1 582 aaKnown RBP21.79■■□□□ 1.08
DDX49-204ENST00000595858 MYO5BQ9ULV0 1848 aa21.79■■□□□ 1.08
DDX49-204ENST00000595858 RGL3Q3MIN7 710 aa21.79■■□□□ 1.08
DDX49-204ENST00000595858 ANKLE2Q86XL3 938 aa21.79■■□□□ 1.08
DDX49-204ENST00000595858 ARHGAP23Q9P227 1491 aa21.78■■□□□ 1.08
DDX49-204ENST00000595858 SPATA31E1Q6ZUB1 1445 aa21.78■■□□□ 1.08
DDX49-204ENST00000595858 SIN3AQ96ST3 1273 aa21.78■■□□□ 1.08
DDX49-204ENST00000595858 SLIT1O75093 1534 aa21.78■■□□□ 1.08
DDX49-204ENST00000595858 TXNDC2Q86VQ3 553 aa21.77■■□□□ 1.08
DDX49-204ENST00000595858 NCKAP5LQ9HCH0 1330 aa21.77■■□□□ 1.08
DDX49-204ENST00000595858 LTKP29376 864 aa21.77■■□□□ 1.08
DDX49-204ENST00000595858 EID1Q9Y6B2 187 aa21.77■■□□□ 1.08
DDX49-204ENST00000595858 HDGFP51858 240 aaKnown RBP21.75■■□□□ 1.07
DDX49-204ENST00000595858 RIMS2Q9UQ26 1411 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms