RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
SYNM-204ENST00000594047 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
SYNM-204ENST00000594047 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
SYNM-204ENST00000594047 CWC22Q9HCG8 908 aaKnown RBP22.9■■□□□ 1.26
SYNM-204ENST00000594047 GPATCH3Q96I76 525 aa22.9■■□□□ 1.26
SYNM-204ENST00000594047 TRIM34Q9BYJ4 488 aa22.9■■□□□ 1.26
SYNM-204ENST00000594047 BCL2L13Q9BXK5 485 aa22.9■■□□□ 1.26
SYNM-204ENST00000594047 FOXD4L6Q3SYB3 417 aaPredicted RBP22.89■■□□□ 1.25
SYNM-204ENST00000594047 FOXD4L3Q6VB84 417 aaPredicted RBP22.89■■□□□ 1.25
SYNM-204ENST00000594047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.89■■□□□ 1.25
SYNM-204ENST00000594047 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.25
SYNM-204ENST00000594047 PSME1Q06323 249 aa22.89■■□□□ 1.25
SYNM-204ENST00000594047 TCERG1O14776 1098 aaKnown RBP22.88■■□□□ 1.25
SYNM-204ENST00000594047 L1TD1Q5T7N2 865 aaKnown RBP22.88■■□□□ 1.25
SYNM-204ENST00000594047 ZNF428Q96B54 188 aa22.88■■□□□ 1.25
SYNM-204ENST00000594047 CTDP1Q9Y5B0 961 aaPredicted RBP22.88■■□□□ 1.25
SYNM-204ENST00000594047 PES1O00541 588 aaKnown RBP22.87■■□□□ 1.25
SYNM-204ENST00000594047 FAM177BA6PVY3 158 aa22.86■■□□□ 1.25
SYNM-204ENST00000594047 FAM69CQ0P6D2 419 aa22.86■■□□□ 1.25
SYNM-204ENST00000594047 NOP58Q9Y2X3 529 aaKnown RBP22.86■■□□□ 1.25
SYNM-204ENST00000594047 CALD1Q05682 793 aaKnown RBP22.85■■□□□ 1.25
SYNM-204ENST00000594047 CNKSR2Q8WXI2 1034 aa22.85■■□□□ 1.25
SYNM-204ENST00000594047 RILPL2Q969X0 211 aa22.85■■□□□ 1.25
SYNM-204ENST00000594047 NACADO15069 1562 aa22.85■■□□□ 1.25
SYNM-204ENST00000594047 NUTM2BA6NNL0 878 aaPredicted RBP22.83■■□□□ 1.25
SYNM-204ENST00000594047 NUTM2EB1AL46 878 aaPredicted RBP22.83■■□□□ 1.25
SYNM-204ENST00000594047 NUTM2AQ8IVF1 878 aaPredicted RBP22.83■■□□□ 1.25
SYNM-204ENST00000594047 PDS5BQ9NTI5 1447 aa22.83■■□□□ 1.25
SYNM-204ENST00000594047 TTC5Q8N0Z6 440 aa22.83■■□□□ 1.24
SYNM-204ENST00000594047 TCEAL9Q9UHQ7 104 aa22.81■■□□□ 1.24
SYNM-204ENST00000594047 CHAF1AQ13111 956 aaPredicted RBP22.81■■□□□ 1.24
SYNM-204ENST00000594047 FYB1O15117 783 aa22.8■■□□□ 1.24
SYNM-204ENST00000594047 MTMR7Q9Y216 660 aa22.8■■□□□ 1.24
SYNM-204ENST00000594047 DHX16O60231 1041 aaKnown RBP22.8■■□□□ 1.24
SYNM-204ENST00000594047 VPS37DQ86XT2 251 aa22.8■■□□□ 1.24
SYNM-204ENST00000594047 ANKRD30AQ9BXX3 1397 aa22.8■■□□□ 1.24
SYNM-204ENST00000594047 PIP4K2BP78356 416 aa22.8■■□□□ 1.24
SYNM-204ENST00000594047 SETD5Q9C0A6 1442 aa22.79■■□□□ 1.24
SYNM-204ENST00000594047 COG3Q96JB2 828 aa22.78■■□□□ 1.24
SYNM-204ENST00000594047 JPH4Q96JJ6 628 aa22.78■■□□□ 1.24
SYNM-204ENST00000594047 RCAN3Q9UKA8 241 aa22.78■■□□□ 1.24
SYNM-204ENST00000594047 KDM4AO75164 1064 aa22.77■■□□□ 1.24
SYNM-204ENST00000594047 MSNP26038 577 aaKnown RBP22.77■■□□□ 1.24
SYNM-204ENST00000594047 EIF3AQ14152 1382 aaKnown RBP22.77■■□□□ 1.24
SYNM-204ENST00000594047 TEFQ10587 303 aa22.76■■□□□ 1.23
SYNM-204ENST00000594047 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
SYNM-204ENST00000594047 A0A0U1RQG5 324 aaPredicted RBP22.76■■□□□ 1.23
SYNM-204ENST00000594047 RWDD1Q9H446 243 aaPredicted RBP22.76■■□□□ 1.23
SYNM-204ENST00000594047 FHOD3Q2V2M9 1422 aa22.76■■□□□ 1.23
SYNM-204ENST00000594047 DCAF8L1A6NGE4 600 aa22.75■■□□□ 1.23
SYNM-204ENST00000594047 APPP05067 770 aa22.75■■□□□ 1.23
SYNM-204ENST00000594047 ATF3P18847 181 aa22.74■■□□□ 1.23
SYNM-204ENST00000594047 FOSBP53539 338 aa22.73■■□□□ 1.23
SYNM-204ENST00000594047 SLC4A3P48751 1232 aa22.73■■□□□ 1.23
SYNM-204ENST00000594047 PLIN1O60240 522 aa22.72■■□□□ 1.23
SYNM-204ENST00000594047 OSCARQ8IYS5 282 aa22.72■■□□□ 1.23
SYNM-204ENST00000594047 NOL10Q9BSC4 688 aaKnown RBP22.72■■□□□ 1.23
SYNM-204ENST00000594047 AIMP1Q12904 312 aaKnown RBP22.71■■□□□ 1.23
SYNM-204ENST00000594047 STRN4Q9NRL3 753 aa22.7■■□□□ 1.22
SYNM-204ENST00000594047 HMMRO75330 724 aa22.7■■□□□ 1.22
SYNM-204ENST00000594047 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
SYNM-204ENST00000594047 SF3A1Q15459 793 aaKnown RBP22.67■■□□□ 1.22
SYNM-204ENST00000594047 L3MBTL2Q969R5 705 aa22.67■■□□□ 1.22
SYNM-204ENST00000594047 C9orf78Q9NZ63 289 aaPredicted RBP22.67■■□□□ 1.22
SYNM-204ENST00000594047 PANK3Q9H999 370 aa22.66■■□□□ 1.22
SYNM-204ENST00000594047 RBM33Q96EV2 1170 aaKnown RBP22.66■■□□□ 1.22
SYNM-204ENST00000594047 MCTP1Q6DN14 999 aa22.65■■□□□ 1.22
SYNM-204ENST00000594047 NLRP2Q9NX02 1062 aa22.65■■□□□ 1.22
SYNM-204ENST00000594047 CEP89Q96ST8 783 aa22.65■■□□□ 1.22
SYNM-204ENST00000594047 RAB3GAP2Q9H2M9 1393 aa22.64■■□□□ 1.22
SYNM-204ENST00000594047 AKAP17AQ02040 695 aaKnown RBP22.64■■□□□ 1.21
SYNM-204ENST00000594047 H3BQV1 296 aa22.64■■□□□ 1.21
SYNM-204ENST00000594047 IFFO2Q5TF58 517 aa22.64■■□□□ 1.21
SYNM-204ENST00000594047 CENPJQ9HC77 1338 aaPredicted RBP22.64■■□□□ 1.21
SYNM-204ENST00000594047 HMOX1P09601 288 aa22.63■■□□□ 1.21
SYNM-204ENST00000594047 TPD52L1Q16890 204 aaPredicted RBP22.63■■□□□ 1.21
SYNM-204ENST00000594047 ANKRD45Q5TZF3 282 aa22.63■■□□□ 1.21
SYNM-204ENST00000594047 CCDC27Q2M243 656 aa22.62■■□□□ 1.21
SYNM-204ENST00000594047 CCDC88BA6NC98 1476 aa22.62■■□□□ 1.21
SYNM-204ENST00000594047 AMOTL1Q8IY63 956 aa22.61■■□□□ 1.21
SYNM-204ENST00000594047 TPM4P67936 248 aa22.61■■□□□ 1.21
SYNM-204ENST00000594047 LMOD3Q0VAK6 560 aa22.6■■□□□ 1.21
SYNM-204ENST00000594047 KIF16BQ96L93 1317 aa22.6■■□□□ 1.21
SYNM-204ENST00000594047 HTATSF1O43719 755 aaKnown RBP22.59■■□□□ 1.21
SYNM-204ENST00000594047 ST20-MTHFSA0A0A6YYL1 179 aa22.58■■□□□ 1.21
SYNM-204ENST00000594047 NEXNQ0ZGT2 675 aa22.58■■□□□ 1.21
SYNM-204ENST00000594047 RALBP1Q15311 655 aa22.58■■□□□ 1.21
SYNM-204ENST00000594047 PMFBP1Q8TBY8 1022 aa22.58■■□□□ 1.21
SYNM-204ENST00000594047 RBM42Q9BTD8 480 aaKnown RBP22.58■■□□□ 1.2
SYNM-204ENST00000594047 FAM184AQ8NB25 1140 aa22.57■■□□□ 1.2
SYNM-204ENST00000594047 SF3B2Q13435 895 aaKnown RBP22.56■■□□□ 1.2
SYNM-204ENST00000594047 GBP4Q96PP9 640 aa22.56■■□□□ 1.2
SYNM-204ENST00000594047 ESCO1Q5FWF5 840 aa22.55■■□□□ 1.2
SYNM-204ENST00000594047 STK11IPQ8N1F8 1099 aa22.54■■□□□ 1.2
SYNM-204ENST00000594047 SYNE3Q6ZMZ3 975 aa22.53■■□□□ 1.2
SYNM-204ENST00000594047 CFAP44Q96MT7 982 aa22.53■■□□□ 1.2
SYNM-204ENST00000594047 EVC2Q86UK5 1308 aa22.53■■□□□ 1.2
SYNM-204ENST00000594047 NEUROD6Q96NK8 337 aa22.52■■□□□ 1.2
SYNM-204ENST00000594047 IKQ13123 557 aaPredicted RBP22.52■■□□□ 1.2
SYNM-204ENST00000594047 HDAC5Q9UQL6 1122 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms