RNA–Protein interactions for RNA: ENST00000593287.5

C19orf48-203, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 5

Gene C19orf48, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-203ENST00000593287 PCGF6Q9BYE7 350 aa20.53■□□□□ 0.88
C19orf48-203ENST00000593287 ESF1Q9H501 851 aaKnown RBP20.53■□□□□ 0.88
C19orf48-203ENST00000593287 RNF17Q9BXT8 1623 aaKnown RBP20.53■□□□□ 0.88
C19orf48-203ENST00000593287 DEPDC5O75140 1603 aa20.49■□□□□ 0.87
C19orf48-203ENST00000593287 RAB3GAP2Q9H2M9 1393 aa20.49■□□□□ 0.87
C19orf48-203ENST00000593287 CNTLNQ9NXG0 1405 aa20.49■□□□□ 0.87
C19orf48-203ENST00000593287 PRDM15P57071 1507 aaPredicted RBP20.48■□□□□ 0.87
C19orf48-203ENST00000593287 UNC13BO14795 1591 aa20.48■□□□□ 0.87
C19orf48-203ENST00000593287 GGT6Q6P531 493 aa20.48■□□□□ 0.87
C19orf48-203ENST00000593287 ZC3H13Q5T200 1668 aaKnown RBP20.46■□□□□ 0.87
C19orf48-203ENST00000593287 KDM5DQ9BY66 1539 aa20.45■□□□□ 0.86
C19orf48-203ENST00000593287 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.86
C19orf48-203ENST00000593287 NUP155O75694 1391 aa20.45■□□□□ 0.86
C19orf48-203ENST00000593287 TRIM52Q96A61 297 aa20.44■□□□□ 0.86
C19orf48-203ENST00000593287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.86not detected■□□□□ 9.6
C19orf48-203ENST00000593287 LMTK2Q8IWU2 1503 aa20.41■□□□□ 0.86
C19orf48-203ENST00000593287 MLECQ14165 292 aa20.4■□□□□ 0.86
C19orf48-203ENST00000593287 IQGAP3Q86VI3 1631 aa20.4■□□□□ 0.86
C19orf48-203ENST00000593287 VWDEQ8N2E2 1590 aa20.4■□□□□ 0.86
C19orf48-203ENST00000593287 SIGLEC1Q9BZZ2 1709 aa20.39■□□□□ 0.85
C19orf48-203ENST00000593287 MROH1Q8NDA8 1641 aa20.38■□□□□ 0.85
C19orf48-203ENST00000593287 MROH2AA6NES4 1674 aa20.37■□□□□ 0.85
C19orf48-203ENST00000593287 RPRD2Q5VT52 1461 aaKnown RBP20.37■□□□□ 0.85
C19orf48-203ENST00000593287 SLC4A1APQ9BWU0 796 aaKnown RBP20.36■□□□□ 0.85
C19orf48-203ENST00000593287 ABCC3O15438 1527 aa20.36■□□□□ 0.85
C19orf48-203ENST00000593287 FER1L4A9Z1Z3 1794 aa20.36■□□□□ 0.85
C19orf48-203ENST00000593287 ARHGAP31Q2M1Z3 1444 aa20.36■□□□□ 0.85
C19orf48-203ENST00000593287 ADAMTSL3P82987 1691 aa20.35■□□□□ 0.85
C19orf48-203ENST00000593287 TET3O43151 1660 aa20.35■□□□□ 0.85
C19orf48-203ENST00000593287 MPHOSPH9Q99550 1183 aa20.31■□□□□ 0.84
C19orf48-203ENST00000593287 EFCAB6Q5THR3 1501 aa20.31■□□□□ 0.84
C19orf48-203ENST00000593287 CLTCQ00610 1675 aaKnown RBP20.3■□□□□ 0.84
C19orf48-203ENST00000593287 ZMYM3Q14202 1370 aa20.3■□□□□ 0.84
C19orf48-203ENST00000593287 CAMSAP1Q5T5Y3 1602 aa20.3■□□□□ 0.84
C19orf48-203ENST00000593287 MADDQ8WXG6 1647 aa20.29■□□□□ 0.84
C19orf48-203ENST00000593287 CEP152O94986 1710 aa20.29■□□□□ 0.84
C19orf48-203ENST00000593287 PZPP20742 1482 aa20.29■□□□□ 0.84
C19orf48-203ENST00000593287 PKD2Q13563 968 aa20.26■□□□□ 0.83
C19orf48-203ENST00000593287 NPATQ14207 1427 aa20.26■□□□□ 0.83
C19orf48-203ENST00000593287 RIMS1Q86UR5 1692 aaKnown RBP20.25■□□□□ 0.83
C19orf48-203ENST00000593287 CLSPNQ9HAW4 1339 aa20.23■□□□□ 0.83
C19orf48-203ENST00000593287 PTPRMP28827 1452 aa20.22■□□□□ 0.83
C19orf48-203ENST00000593287 E9PCH4 1651 aa20.2■□□□□ 0.82
C19orf48-203ENST00000593287 SLC52A1Q9NWF4 448 aa20.2■□□□□ 0.82
C19orf48-203ENST00000593287 C3P01024 1663 aa20.19■□□□□ 0.82
C19orf48-203ENST00000593287 SPATA31D1Q6ZQQ2 1576 aa20.18■□□□□ 0.82
C19orf48-203ENST00000593287 DHX57Q6P158 1386 aaKnown RBP20.18■□□□□ 0.82
C19orf48-203ENST00000593287 PTPRTO14522 1441 aa20.18■□□□□ 0.82
C19orf48-203ENST00000593287 ERVK-7P63135 1459 aa20.18■□□□□ 0.82
C19orf48-203ENST00000593287 SETD1BQ9UPS6 1966 aaKnown RBP20.17■□□□□ 0.82
C19orf48-203ENST00000593287 KDM4FA0A1W2PPD8 638 aa20.17■□□□□ 0.82
C19orf48-203ENST00000593287 NOS1P29475 1434 aa20.17■□□□□ 0.82
C19orf48-203ENST00000593287 PREX1Q8TCU6 1659 aa20.16■□□□□ 0.82
C19orf48-203ENST00000593287 SPHKAPQ2M3C7 1700 aa20.16■□□□□ 0.82
C19orf48-203ENST00000593287 TNRQ92752 1358 aa20.15■□□□□ 0.82
C19orf48-203ENST00000593287 NLRP1Q9C000 1473 aa20.15■□□□□ 0.82
C19orf48-203ENST00000593287 TRPM2O94759 1503 aa20.15■□□□□ 0.82
C19orf48-203ENST00000593287 CCDC144AA2RUR9 1427 aa20.14■□□□□ 0.81
C19orf48-203ENST00000593287 CCER1Q8TC90 406 aaPredicted RBP20.12■□□□□ 0.81
C19orf48-203ENST00000593287 ANKRD30BQ9BXX2 1392 aa20.11■□□□□ 0.81
C19orf48-203ENST00000593287 CEBPAP49715 358 aaPredicted RBP20.1■□□□□ 0.81
C19orf48-203ENST00000593287 FBXO31Q5XUX0 539 aaPredicted RBP20.09■□□□□ 0.81
C19orf48-203ENST00000593287 UHRF1BP1Q6BDS2 1440 aa20.08■□□□□ 0.8
C19orf48-203ENST00000593287 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.8
C19orf48-203ENST00000593287 KDM5AP29375 1690 aaKnown RBP20.07■□□□□ 0.8
C19orf48-203ENST00000593287 STAG3Q9UJ98 1225 aa20.07■□□□□ 0.8
C19orf48-203ENST00000593287 FOXD1Q16676 465 aa20.06■□□□□ 0.8
C19orf48-203ENST00000593287 PIK3C2BO00750 1634 aa20.05■□□□□ 0.8
C19orf48-203ENST00000593287 SYNMO15061 1565 aa20.05■□□□□ 0.8
C19orf48-203ENST00000593287 NEURL4Q96JN8 1562 aa20.05■□□□□ 0.8
C19orf48-203ENST00000593287 HDGFP51858 240 aaKnown RBP20.05■□□□□ 0.8
C19orf48-203ENST00000593287 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
C19orf48-203ENST00000593287 PLA2R1Q13018 1463 aa20.05■□□□□ 0.8
C19orf48-203ENST00000593287 STAC3Q96MF2 364 aa20.04■□□□□ 0.8
C19orf48-203ENST00000593287 A2ML1A8K2U0 1454 aa20.04■□□□□ 0.8
C19orf48-203ENST00000593287 IDI1Q13907 227 aa20.03■□□□□ 0.8
C19orf48-203ENST00000593287 THEMISQ8N1K5 641 aaPredicted RBP20.03■□□□□ 0.8
C19orf48-203ENST00000593287 MYO3AQ8NEV4 1616 aa20.02■□□□□ 0.8
C19orf48-203ENST00000593287 KIF1BO60333 1816 aa20.02■□□□□ 0.8
C19orf48-203ENST00000593287 TIMELESSQ9UNS1 1208 aa20.02■□□□□ 0.8
C19orf48-203ENST00000593287 ZNF142P52746 1687 aaPredicted RBP20■□□□□ 0.79
C19orf48-203ENST00000593287 ADGRB3O60242 1522 aa20■□□□□ 0.79
C19orf48-203ENST00000593287 RPGRIP1LQ68CZ1 1315 aa20■□□□□ 0.79
C19orf48-203ENST00000593287 UGGT1Q9NYU2 1555 aa20■□□□□ 0.79
C19orf48-203ENST00000593287 CEP170BQ9Y4F5 1589 aaPredicted RBP20■□□□□ 0.79
C19orf48-203ENST00000593287 CLTCL1P53675 1640 aa19.99■□□□□ 0.79
C19orf48-203ENST00000593287 CHGAP10645 457 aaKnown RBP19.97■□□□□ 0.79
C19orf48-203ENST00000593287 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
C19orf48-203ENST00000593287 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.96■□□□□ 0.79
C19orf48-203ENST00000593287 TMEM131LA2VDJ0 1609 aa19.94■□□□□ 0.78
C19orf48-203ENST00000593287 ZNF326Q5BKZ1 582 aaKnown RBP19.94■□□□□ 0.78
C19orf48-203ENST00000593287 EID1Q9Y6B2 187 aa19.94■□□□□ 0.78
C19orf48-203ENST00000593287 TONSLQ96HA7 1378 aa19.93■□□□□ 0.78
C19orf48-203ENST00000593287 UBR1Q8IWV7 1749 aa19.93■□□□□ 0.78
C19orf48-203ENST00000593287 SPATA31E1Q6ZUB1 1445 aa19.93■□□□□ 0.78
C19orf48-203ENST00000593287 VGFO15240 615 aaPredicted RBP19.91■□□□□ 0.78
C19orf48-203ENST00000593287 NEUROD1Q13562 356 aa19.91■□□□□ 0.78
C19orf48-203ENST00000593287 TMEM2Q9UHN6 1383 aa19.9■□□□□ 0.78
C19orf48-203ENST00000593287 SLIT1O75093 1534 aa19.89■□□□□ 0.77
C19orf48-203ENST00000593287 ANKLE2Q86XL3 938 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms