RNA–Protein interactions for RNA: ENST00000593287.5

C19orf48-203, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 5

Gene C19orf48, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-203ENST00000593287 NISCHQ9Y2I1 1504 aa32.5■■■□□ 2.79
C19orf48-203ENST00000593287 CCDC180Q9P1Z9 1646 aa28.78■■■□□ 2.2
C19orf48-203ENST00000593287 ABCC9O60706 1549 aa27.55■■■□□ 2
C19orf48-203ENST00000593287 ZCCHC6Q5VYS8 1495 aaKnown RBP27.17■■□□□ 1.94
C19orf48-203ENST00000593287 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
C19orf48-203ENST00000593287 MYO15BQ96JP2 1530 aa27.01■■□□□ 1.91
C19orf48-203ENST00000593287 NACADO15069 1562 aa26.97■■□□□ 1.91
C19orf48-203ENST00000593287 DCAF8L2P0C7V8 631 aa26.92■■□□□ 1.9
C19orf48-203ENST00000593287 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
C19orf48-203ENST00000593287 SCRIBQ14160 1630 aa26.14■■□□□ 1.77
C19orf48-203ENST00000593287 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.76
C19orf48-203ENST00000593287 SHROOM4Q9ULL8 1493 aa25.94■■□□□ 1.74
C19orf48-203ENST00000593287 BICRAQ9NZM4 1560 aa25.86■■□□□ 1.73
C19orf48-203ENST00000593287 PABPN1Q86U42 306 aaKnown RBP eCLIP25.77■■□□□ 1.72
C19orf48-203ENST00000593287 BAZ1AQ9NRL2 1556 aaPredicted RBP25.23■■□□□ 1.63
C19orf48-203ENST00000593287 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
C19orf48-203ENST00000593287 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
C19orf48-203ENST00000593287 SMARCA4P51532 1647 aa25.1■■□□□ 1.61
C19orf48-203ENST00000593287 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
C19orf48-203ENST00000593287 SMARCA2P51531 1590 aa24.96■■□□□ 1.59
C19orf48-203ENST00000593287 MROH2BQ7Z745 1585 aa24.96■■□□□ 1.59
C19orf48-203ENST00000593287 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
C19orf48-203ENST00000593287 RSF1Q96T23 1441 aaPredicted RBP24.89■■□□□ 1.58
C19orf48-203ENST00000593287 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
C19orf48-203ENST00000593287 NCAPD3P42695 1498 aa24.83■■□□□ 1.57
C19orf48-203ENST00000593287 HMGXB3Q12766 1538 aa24.78■■□□□ 1.56
C19orf48-203ENST00000593287 BAZ1BQ9UIG0 1483 aaKnown RBP24.73■■□□□ 1.55
C19orf48-203ENST00000593287 DNAJC5BQ9UF47 199 aa24.73■■□□□ 1.55
C19orf48-203ENST00000593287 WIZO95785 1651 aa24.7■■□□□ 1.54
C19orf48-203ENST00000593287 TOP2AP11388 1531 aaKnown RBP24.59■■□□□ 1.53
C19orf48-203ENST00000593287 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
C19orf48-203ENST00000593287 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
C19orf48-203ENST00000593287 LAMC3Q9Y6N6 1575 aa24.14■■□□□ 1.45
C19orf48-203ENST00000593287 CADPSQ9ULU8 1353 aa24.14■■□□□ 1.45
C19orf48-203ENST00000593287 CFTRP13569 1480 aa24.07■■□□□ 1.44
C19orf48-203ENST00000593287 PDS5BQ9NTI5 1447 aa24■■□□□ 1.43
C19orf48-203ENST00000593287 PRDM2Q13029 1718 aa23.94■■□□□ 1.42
C19orf48-203ENST00000593287 NESP48681 1621 aa23.91■■□□□ 1.42
C19orf48-203ENST00000593287 ERCC6Q03468 1493 aa23.84■■□□□ 1.41
C19orf48-203ENST00000593287 FANCD2Q9BXW9 1451 aa23.82■■□□□ 1.4
C19orf48-203ENST00000593287 CEP164Q9UPV0 1460 aa23.79■■□□□ 1.4
C19orf48-203ENST00000593287 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.38
C19orf48-203ENST00000593287 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
C19orf48-203ENST00000593287 MRC2Q9UBG0 1479 aa23.64■■□□□ 1.38
C19orf48-203ENST00000593287 THOC2Q8NI27 1593 aaKnown RBP23.54■■□□□ 1.36
C19orf48-203ENST00000593287 WDR62O43379 1518 aa23.54■■□□□ 1.36
C19orf48-203ENST00000593287 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
C19orf48-203ENST00000593287 WRNQ14191 1432 aaPredicted RBP eCLIP23.52■■□□□ 1.36
C19orf48-203ENST00000593287 URB2Q14146 1524 aaKnown RBP23.48■■□□□ 1.35
C19orf48-203ENST00000593287 CUX2O14529 1486 aa23.47■■□□□ 1.35
C19orf48-203ENST00000593287 TOPBP1Q92547 1522 aa23.47■■□□□ 1.35
C19orf48-203ENST00000593287 TOP2BQ02880 1626 aa23.41■■□□□ 1.34
C19orf48-203ENST00000593287 CUX1P39880 1505 aa23.41■■□□□ 1.34
C19orf48-203ENST00000593287 BIVM-ERCC5R4GMW8 1640 aa23.4■■□□□ 1.34
C19orf48-203ENST00000593287 SYNJ1O43426 1573 aa23.32■■□□□ 1.32
C19orf48-203ENST00000593287 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
C19orf48-203ENST00000593287 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
C19orf48-203ENST00000593287 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
C19orf48-203ENST00000593287 IFT140Q96RY7 1462 aa23.3■■□□□ 1.32
C19orf48-203ENST00000593287 SOGA1O94964 1423 aa23.25■■□□□ 1.31
C19orf48-203ENST00000593287 CHIC1Q5VXU3 224 aa23.21■■□□□ 1.31
C19orf48-203ENST00000593287 WDR97A6NE52 1622 aa23.21■■□□□ 1.31
C19orf48-203ENST00000593287 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
C19orf48-203ENST00000593287 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
C19orf48-203ENST00000593287 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
C19orf48-203ENST00000593287 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
C19orf48-203ENST00000593287 EEA1Q15075 1411 aa23■■□□□ 1.27
C19orf48-203ENST00000593287 GAPVD1Q14C86 1478 aa22.99■■□□□ 1.27
C19orf48-203ENST00000593287 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
C19orf48-203ENST00000593287 EIF4G3O43432 1585 aaKnown RBP22.98■■□□□ 1.27
C19orf48-203ENST00000593287 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
C19orf48-203ENST00000593287 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
C19orf48-203ENST00000593287 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
C19orf48-203ENST00000593287 AQRO60306 1485 aaKnown RBP eCLIP22.94■■□□□ 1.26not detected■■■■□ 23.4
C19orf48-203ENST00000593287 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
C19orf48-203ENST00000593287 MAGI1Q96QZ7 1491 aaPredicted RBP22.88■■□□□ 1.25
C19orf48-203ENST00000593287 PBRM1Q86U86 1689 aa22.87■■□□□ 1.25
C19orf48-203ENST00000593287 CUL7Q14999 1698 aa22.82■■□□□ 1.24
C19orf48-203ENST00000593287 IGF1RP08069 1367 aa22.81■■□□□ 1.24
C19orf48-203ENST00000593287 FHAD1B1AJZ9 1412 aa22.78■■□□□ 1.24
C19orf48-203ENST00000593287 CSRNP3Q8WYN3 585 aa22.78■■□□□ 1.24
C19orf48-203ENST00000593287 SNAPC4Q5SXM2 1469 aa22.78■■□□□ 1.24
C19orf48-203ENST00000593287 SYNJ2O15056 1496 aa22.75■■□□□ 1.23
C19orf48-203ENST00000593287 CARMIL1Q5VZK9 1371 aa22.73■■□□□ 1.23
C19orf48-203ENST00000593287 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
C19orf48-203ENST00000593287 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
C19orf48-203ENST00000593287 CHMP7Q8WUX9 453 aaPredicted RBP22.72■■□□□ 1.23
C19orf48-203ENST00000593287 RAPGEF2Q9Y4G8 1499 aa22.66■■□□□ 1.22
C19orf48-203ENST00000593287 PRXQ9BXM0 1461 aa22.65■■□□□ 1.22
C19orf48-203ENST00000593287 FBLN2P98095 1184 aa22.64■■□□□ 1.21
C19orf48-203ENST00000593287 FAM9AQ8IZU1 332 aaPredicted RBP22.64■■□□□ 1.21
C19orf48-203ENST00000593287 GRIN2AQ12879 1464 aa22.63■■□□□ 1.21
C19orf48-203ENST00000593287 KIF21BO75037 1637 aa22.6■■□□□ 1.21
C19orf48-203ENST00000593287 OSCARQ8IYS5 282 aa22.57■■□□□ 1.2
C19orf48-203ENST00000593287 CHD1O14646 1710 aa22.57■■□□□ 1.2
C19orf48-203ENST00000593287 GOLGA3Q08378 1498 aa22.53■■□□□ 1.2
C19orf48-203ENST00000593287 NUP160Q12769 1436 aa22.51■■□□□ 1.19
C19orf48-203ENST00000593287 KIAA0586Q9BVV6 1533 aa22.45■■□□□ 1.18
C19orf48-203ENST00000593287 UBTFP17480 764 aaKnown RBP22.41■■□□□ 1.18
C19orf48-203ENST00000593287 CEP170Q5SW79 1584 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms