RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SYCP2Q9BX26 1530 aa15.07■□□□□ 0
BRCA1-226ENST00000591534 CDC42BPAQ5VT25 1732 aa15.06■□□□□ 0
BRCA1-226ENST00000591534 KIDINS220Q9ULH0 1771 aa15.06■□□□□ 0
BRCA1-226ENST00000591534 C3P01024 1663 aa15.04■□□□□ -0
BRCA1-226ENST00000591534 A2MP01023 1474 aa15.04■□□□□ -0
BRCA1-226ENST00000591534 GGT6Q6P531 493 aa15.04■□□□□ -0
BRCA1-226ENST00000591534 ATP7AQ04656 1500 aa15.03■□□□□ -0
BRCA1-226ENST00000591534 RSPH4AQ5TD94 716 aa15.03■□□□□ -0
BRCA1-226ENST00000591534 NCOA1Q15788 1441 aa15.01□□□□□ -0.01
BRCA1-226ENST00000591534 PKD2Q13563 968 aa15.01□□□□□ -0.01
BRCA1-226ENST00000591534 STRCQ7RTU9 1775 aa15.01□□□□□ -0.01
BRCA1-226ENST00000591534 PROM2Q8N271 834 aa15□□□□□ -0.01
BRCA1-226ENST00000591534 RTEL1-TNFRSF6BF6WH68 1400 aa15□□□□□ -0.01
BRCA1-226ENST00000591534 MROH2AA6NES4 1674 aa15□□□□□ -0.01
BRCA1-226ENST00000591534 ZBTB12Q9Y330 459 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-226ENST00000591534 CEP162Q5TB80 1403 aa14.99□□□□□ -0.01
BRCA1-226ENST00000591534 EHBP1L1Q8N3D4 1523 aa14.98□□□□□ -0.01
BRCA1-226ENST00000591534 IQSEC2Q5JU85 1478 aa14.97□□□□□ -0.01
BRCA1-226ENST00000591534 INO80Q9ULG1 1556 aaPredicted RBP14.97□□□□□ -0.01
BRCA1-226ENST00000591534 DHX29Q7Z478 1369 aaKnown RBP14.97□□□□□ -0.01
BRCA1-226ENST00000591534 ZNF644Q9H582 1327 aaPredicted RBP14.96□□□□□ -0.01
BRCA1-226ENST00000591534 PLXNC1O60486 1568 aa14.96□□□□□ -0.01
BRCA1-226ENST00000591534 SUPT6HQ7KZ85 1726 aaKnown RBP14.96□□□□□ -0.01
BRCA1-226ENST00000591534 FBXO3Q9UK99 471 aa14.96□□□□□ -0.01
BRCA1-226ENST00000591534 CAMSAP1Q5T5Y3 1602 aa14.95□□□□□ -0.02
BRCA1-226ENST00000591534 NCKAP5LQ9HCH0 1330 aa14.95□□□□□ -0.02
BRCA1-226ENST00000591534 PTPRKQ15262 1439 aa14.95□□□□□ -0.02
BRCA1-226ENST00000591534 TSPY4P0CV99 314 aa14.95□□□□□ -0.02
BRCA1-226ENST00000591534 TSPY10P0CW01 314 aa14.95□□□□□ -0.02
BRCA1-226ENST00000591534 PLA2R1Q13018 1463 aa14.95□□□□□ -0.02
BRCA1-226ENST00000591534 MBD5Q9P267 1494 aa14.95□□□□□ -0.02
BRCA1-226ENST00000591534 DISP3Q9P2K9 1392 aa14.94□□□□□ -0.02
BRCA1-226ENST00000591534 KIF3BO15066 747 aa14.93□□□□□ -0.02
BRCA1-226ENST00000591534 TIAM1Q13009 1591 aa14.93□□□□□ -0.02
BRCA1-226ENST00000591534 ADGBQ8N7X0 1667 aa14.93□□□□□ -0.02
BRCA1-226ENST00000591534 WASHC2CQ9Y4E1 1318 aa14.92□□□□□ -0.02
BRCA1-226ENST00000591534 CLTCQ00610 1675 aaKnown RBP14.91□□□□□ -0.02
BRCA1-226ENST00000591534 CCDC141Q6ZP82 1450 aa14.91□□□□□ -0.02
BRCA1-226ENST00000591534 LTBP4Q8N2S1 1624 aa14.91□□□□□ -0.02
BRCA1-226ENST00000591534 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
BRCA1-226ENST00000591534 FAM135AQ9P2D6 1515 aa14.89□□□□□ -0.03
BRCA1-226ENST00000591534 CEP170BQ9Y4F5 1589 aaPredicted RBP14.89□□□□□ -0.03
BRCA1-226ENST00000591534 ZNF335Q9H4Z2 1342 aaPredicted RBP14.89□□□□□ -0.03
BRCA1-226ENST00000591534 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
BRCA1-226ENST00000591534 UBAP1LF5GYI3 381 aa14.88□□□□□ -0.03
BRCA1-226ENST00000591534 TCOF1Q13428 1488 aaKnown RBP14.88□□□□□ -0.03
BRCA1-226ENST00000591534 TNRQ92752 1358 aa14.87□□□□□ -0.03
BRCA1-226ENST00000591534 THEMISQ8N1K5 641 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-226ENST00000591534 MYO3AQ8NEV4 1616 aa14.87□□□□□ -0.03
BRCA1-226ENST00000591534 CAMSAP2Q08AD1 1489 aa14.87□□□□□ -0.03
BRCA1-226ENST00000591534 LOC105371045A0A1W2PR82 267 aa14.86□□□□□ -0.03
BRCA1-226ENST00000591534 ANKLE2Q86XL3 938 aa14.86□□□□□ -0.03
BRCA1-226ENST00000591534 ZNF142P52746 1687 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-226ENST00000591534 KDM5DQ9BY66 1539 aa14.85□□□□□ -0.03
BRCA1-226ENST00000591534 PZPP20742 1482 aa14.84□□□□□ -0.03
BRCA1-226ENST00000591534 FBXO31Q5XUX0 539 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-226ENST00000591534 VPS8Q8N3P4 1428 aa14.83□□□□□ -0.04
BRCA1-226ENST00000591534 TOM1O60784 492 aa14.82□□□□□ -0.04
BRCA1-226ENST00000591534 VASPP50552 380 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-226ENST00000591534 MIA2Q96PC5 1412 aa14.82□□□□□ -0.04
BRCA1-226ENST00000591534 NLRP1Q9C000 1473 aa14.82□□□□□ -0.04
BRCA1-226ENST00000591534 ARHGEF5Q12774 1597 aa14.81□□□□□ -0.04
BRCA1-226ENST00000591534 SOCS7O14512 581 aa14.81□□□□□ -0.04
BRCA1-226ENST00000591534 ZNF692Q9BU19 519 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-226ENST00000591534 LRRC9Q6ZRR7 1453 aa14.81□□□□□ -0.04
BRCA1-226ENST00000591534 DNMT1P26358 1616 aaKnown RBP14.8□□□□□ -0.04
BRCA1-226ENST00000591534 CPS1P31327 1500 aa14.77□□□□□ -0.04
BRCA1-226ENST00000591534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.77□□□□□ -0.04
BRCA1-226ENST00000591534 ILDR2Q71H61 639 aa14.77□□□□□ -0.05
BRCA1-226ENST00000591534 SPATA31D1Q6ZQQ2 1576 aa14.77□□□□□ -0.05
BRCA1-226ENST00000591534 MAP3K1Q13233 1512 aa14.76□□□□□ -0.05
BRCA1-226ENST00000591534 MYOM3Q5VTT5 1437 aa14.76□□□□□ -0.05
BRCA1-226ENST00000591534 POTEHQ6S545 545 aa14.76□□□□□ -0.05
BRCA1-226ENST00000591534 SHANK2Q9UPX8 1470 aa14.76□□□□□ -0.05
BRCA1-226ENST00000591534 UGGT1Q9NYU2 1555 aa14.75□□□□□ -0.05
BRCA1-226ENST00000591534 PIP4K2BP78356 416 aa14.74□□□□□ -0.05
BRCA1-226ENST00000591534 NPHP4O75161 1426 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-226ENST00000591534 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-226ENST00000591534 IFNLR1Q8IU57 520 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-226ENST00000591534 MAST1Q9Y2H9 1570 aa14.73□□□□□ -0.05
BRCA1-226ENST00000591534 MED14O60244 1454 aa14.72□□□□□ -0.05
BRCA1-226ENST00000591534 ABCC3O15438 1527 aa14.71□□□□□ -0.06
BRCA1-226ENST00000591534 SPDYE2BA6NHP3 402 aa14.7□□□□□ -0.06
BRCA1-226ENST00000591534 SPDYE6P0CI01 402 aa14.7□□□□□ -0.06
BRCA1-226ENST00000591534 SPDYE2Q495Y8 402 aa14.7□□□□□ -0.06
BRCA1-226ENST00000591534 ZC3H13Q5T200 1668 aaKnown RBP14.7□□□□□ -0.06
BRCA1-226ENST00000591534 DUOX2Q9NRD8 1548 aa14.7□□□□□ -0.06
BRCA1-226ENST00000591534 RNF17Q9BXT8 1623 aaKnown RBP14.7□□□□□ -0.06
BRCA1-226ENST00000591534 EIF2AK4Q9P2K8 1649 aaKnown RBP14.7□□□□□ -0.06
BRCA1-226ENST00000591534 POLR1AO95602 1720 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-226ENST00000591534 NEURL4Q96JN8 1562 aa14.69□□□□□ -0.06
BRCA1-226ENST00000591534 EID1Q9Y6B2 187 aa14.69□□□□□ -0.06
BRCA1-226ENST00000591534 DEPDC5O75140 1603 aa14.69□□□□□ -0.06
BRCA1-226ENST00000591534 KANK1Q14678 1352 aa14.69□□□□□ -0.06
BRCA1-226ENST00000591534 HSPA1LP34931 641 aa14.68□□□□□ -0.06
BRCA1-226ENST00000591534 RRP7BPQ9NSQ0 103 aa14.68□□□□□ -0.06
BRCA1-226ENST00000591534 KIF15Q9NS87 1388 aa14.68□□□□□ -0.06
BRCA1-226ENST00000591534 ERVK-7P63135 1459 aa14.68□□□□□ -0.06
BRCA1-226ENST00000591534 STAG3Q9UJ98 1225 aa14.67□□□□□ -0.06
BRCA1-226ENST00000591534 SSUH2Q9Y2M2 353 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms