RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 HFM1A2PYH4 1435 aa28.79■■■□□ 2.2
DDX39A-214ENST00000590556 NAIPQ13075 1403 aa28.79■■■□□ 2.2
DDX39A-214ENST00000590556 GCC2Q8IWJ2 1684 aa28.77■■■□□ 2.2
DDX39A-214ENST00000590556 RIMS1Q86UR5 1692 aaKnown RBP28.77■■■□□ 2.2
DDX39A-214ENST00000590556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.75■■■□□ 2.194e-7■■■□□ 18.4
DDX39A-214ENST00000590556 CNTLNQ9NXG0 1405 aa28.73■■■□□ 2.19
DDX39A-214ENST00000590556 DEPDC5O75140 1603 aa28.72■■■□□ 2.19
DDX39A-214ENST00000590556 MROH1Q8NDA8 1641 aa28.72■■■□□ 2.19
DDX39A-214ENST00000590556 WASHC2CQ9Y4E1 1318 aa28.72■■■□□ 2.19
DDX39A-214ENST00000590556 TRIM26Q12899 539 aaPredicted RBP28.72■■■□□ 2.19
DDX39A-214ENST00000590556 CLTCQ00610 1675 aaKnown RBP28.7■■■□□ 2.19
DDX39A-214ENST00000590556 KANK1Q14678 1352 aa28.7■■■□□ 2.18
DDX39A-214ENST00000590556 PRDM15P57071 1507 aaPredicted RBP28.69■■■□□ 2.18
DDX39A-214ENST00000590556 FAM135AQ9P2D6 1515 aa28.69■■■□□ 2.18
DDX39A-214ENST00000590556 PTPRMP28827 1452 aa28.69■■■□□ 2.18
DDX39A-214ENST00000590556 KDM5DQ9BY66 1539 aa28.69■■■□□ 2.18
DDX39A-214ENST00000590556 UNC13BO14795 1591 aa28.66■■■□□ 2.18
DDX39A-214ENST00000590556 ABCC3O15438 1527 aa28.65■■■□□ 2.18
DDX39A-214ENST00000590556 PLPPR3Q6T4P5 718 aa28.65■■■□□ 2.18
DDX39A-214ENST00000590556 SETD5Q9C0A6 1442 aa28.65■■■□□ 2.18
DDX39A-214ENST00000590556 MROH2AA6NES4 1674 aa28.64■■■□□ 2.18
DDX39A-214ENST00000590556 ZC3H13Q5T200 1668 aaKnown RBP28.64■■■□□ 2.17
DDX39A-214ENST00000590556 ZMYM3Q14202 1370 aa28.63■■■□□ 2.17
DDX39A-214ENST00000590556 CEBPAP49715 358 aaPredicted RBP28.62■■■□□ 2.17
DDX39A-214ENST00000590556 CEP152O94986 1710 aa28.62■■■□□ 2.17
DDX39A-214ENST00000590556 VWDEQ8N2E2 1590 aa28.62■■■□□ 2.17
DDX39A-214ENST00000590556 NUP155O75694 1391 aa28.61■■■□□ 2.17
DDX39A-214ENST00000590556 C3P01024 1663 aa28.6■■■□□ 2.17
DDX39A-214ENST00000590556 AEBP2Q6ZN18 517 aaPredicted RBP28.58■■■□□ 2.17
DDX39A-214ENST00000590556 TRIM52Q96A61 297 aa28.57■■■□□ 2.16
DDX39A-214ENST00000590556 LMTK2Q8IWU2 1503 aa28.56■■■□□ 2.16
DDX39A-214ENST00000590556 CAMSAP1Q5T5Y3 1602 aa28.55■■■□□ 2.16
DDX39A-214ENST00000590556 RAB3GAP2Q9H2M9 1393 aa28.55■■■□□ 2.16
DDX39A-214ENST00000590556 IQGAP3Q86VI3 1631 aa28.54■■■□□ 2.16
DDX39A-214ENST00000590556 ACIN1Q9UKV3 1341 aaKnown RBP28.52■■■□□ 2.16
DDX39A-214ENST00000590556 PZPP20742 1482 aa28.51■■■□□ 2.15
DDX39A-214ENST00000590556 TET3O43151 1660 aa28.49■■■□□ 2.15
DDX39A-214ENST00000590556 ARHGAP31Q2M1Z3 1444 aa28.49■■■□□ 2.15
DDX39A-214ENST00000590556 FBXO31Q5XUX0 539 aaPredicted RBP28.48■■■□□ 2.15
DDX39A-214ENST00000590556 EFCAB6Q5THR3 1501 aa28.48■■■□□ 2.15
DDX39A-214ENST00000590556 HRCP23327 699 aa28.47■■■□□ 2.15
DDX39A-214ENST00000590556 NPATQ14207 1427 aa28.46■■■□□ 2.15
DDX39A-214ENST00000590556 CFAP65Q6ZU64 1925 aaKnown RBP28.46■■■□□ 2.15
DDX39A-214ENST00000590556 SETD1BQ9UPS6 1966 aaKnown RBP28.44■■■□□ 2.14
DDX39A-214ENST00000590556 SLC4A1APQ9BWU0 796 aaKnown RBP28.42■■■□□ 2.14
DDX39A-214ENST00000590556 ERVK-7P63135 1459 aa28.4■■■□□ 2.14
DDX39A-214ENST00000590556 RPRD2Q5VT52 1461 aaKnown RBP28.4■■■□□ 2.14
DDX39A-214ENST00000590556 TNRQ92752 1358 aa28.39■■■□□ 2.14
DDX39A-214ENST00000590556 E9PCH4 1651 aa28.39■■■□□ 2.14
DDX39A-214ENST00000590556 PREX1Q8TCU6 1659 aa28.39■■■□□ 2.14
DDX39A-214ENST00000590556 SPATA31D1Q6ZQQ2 1576 aa28.37■■■□□ 2.13
DDX39A-214ENST00000590556 PCGF6Q9BYE7 350 aa28.37■■■□□ 2.13
DDX39A-214ENST00000590556 PKD2Q13563 968 aa28.36■■■□□ 2.13
DDX39A-214ENST00000590556 MPHOSPH9Q99550 1183 aa28.36■■■□□ 2.13
DDX39A-214ENST00000590556 UHRF1BP1Q6BDS2 1440 aa28.33■■■□□ 2.13
DDX39A-214ENST00000590556 NOS1P29475 1434 aa28.32■■■□□ 2.12
DDX39A-214ENST00000590556 MYO3AQ8NEV4 1616 aa28.29■■■□□ 2.12
DDX39A-214ENST00000590556 SYNMO15061 1565 aa28.27■■■□□ 2.12
DDX39A-214ENST00000590556 NLRP1Q9C000 1473 aa28.27■■■□□ 2.12
DDX39A-214ENST00000590556 FOXD1Q16676 465 aa28.26■■■□□ 2.11
DDX39A-214ENST00000590556 LMTK3Q96Q04 1460 aa28.26■■■□□ 2.11
DDX39A-214ENST00000590556 SPHKAPQ2M3C7 1700 aa28.24■■■□□ 2.11
DDX39A-214ENST00000590556 PTPRTO14522 1441 aa28.24■■■□□ 2.11
DDX39A-214ENST00000590556 A2ML1A8K2U0 1454 aa28.23■■■□□ 2.11
DDX39A-214ENST00000590556 SLC52A1Q9NWF4 448 aa28.23■■■□□ 2.11
DDX39A-214ENST00000590556 CEP170BQ9Y4F5 1589 aaPredicted RBP28.23■■■□□ 2.11
DDX39A-214ENST00000590556 ZNF142P52746 1687 aaPredicted RBP28.22■■■□□ 2.11
DDX39A-214ENST00000590556 IDI1Q13907 227 aa28.21■■■□□ 2.11
DDX39A-214ENST00000590556 PLA2R1Q13018 1463 aa28.17■■■□□ 2.1
DDX39A-214ENST00000590556 HSPA2P54652 639 aa28.17■■■□□ 2.1
DDX39A-214ENST00000590556 TRPM2O94759 1503 aa28.17■■■□□ 2.1
DDX39A-214ENST00000590556 UGGT1Q9NYU2 1555 aa28.16■■■□□ 2.1
DDX39A-214ENST00000590556 STAG3Q9UJ98 1225 aa28.16■■■□□ 2.1
DDX39A-214ENST00000590556 PIK3C2BO00750 1634 aa28.16■■■□□ 2.1
DDX39A-214ENST00000590556 THEMISQ8N1K5 641 aaPredicted RBP28.14■■■□□ 2.1
DDX39A-214ENST00000590556 UBR1Q8IWV7 1749 aa28.11■■■□□ 2.09
DDX39A-214ENST00000590556 CHGAP10645 457 aaKnown RBP28.1■■■□□ 2.09
DDX39A-214ENST00000590556 CLTCL1P53675 1640 aa28.1■■■□□ 2.09
DDX39A-214ENST00000590556 ADGRB3O60242 1522 aa28.08■■■□□ 2.09
DDX39A-214ENST00000590556 KDM5AP29375 1690 aaKnown RBP28.08■■■□□ 2.09
DDX39A-214ENST00000590556 ANKRD30BQ9BXX2 1392 aa28.07■■■□□ 2.08
DDX39A-214ENST00000590556 CCDC144AA2RUR9 1427 aa28.07■■■□□ 2.08
DDX39A-214ENST00000590556 TMEM131LA2VDJ0 1609 aa28.05■■■□□ 2.08
DDX39A-214ENST00000590556 DHX57Q6P158 1386 aaKnown RBP28.05■■■□□ 2.08
DDX39A-214ENST00000590556 KIF1BO60333 1816 aa28.03■■■□□ 2.08
DDX39A-214ENST00000590556 MYO5BQ9ULV0 1848 aa28.03■■■□□ 2.08
DDX39A-214ENST00000590556 TMEM2Q9UHN6 1383 aa27.99■■■□□ 2.07
DDX39A-214ENST00000590556 ANKLE2Q86XL3 938 aa27.99■■■□□ 2.07
DDX39A-214ENST00000590556 SLIT1O75093 1534 aa27.97■■■□□ 2.07
DDX39A-214ENST00000590556 NCKAP5LQ9HCH0 1330 aa27.97■■■□□ 2.07
DDX39A-214ENST00000590556 ZNF326Q5BKZ1 582 aaKnown RBP27.97■■■□□ 2.07
DDX39A-214ENST00000590556 ARHGAP23Q9P227 1491 aa27.96■■■□□ 2.07
DDX39A-214ENST00000590556 EID1Q9Y6B2 187 aa27.96■■■□□ 2.07
DDX39A-214ENST00000590556 STRCQ7RTU9 1775 aa27.95■■■□□ 2.06
DDX39A-214ENST00000590556 TXNDC2Q86VQ3 553 aa27.94■■■□□ 2.06
DDX39A-214ENST00000590556 HDGFP51858 240 aaKnown RBP27.93■■■□□ 2.06
DDX39A-214ENST00000590556 RIMS2Q9UQ26 1411 aa27.92■■■□□ 2.06
DDX39A-214ENST00000590556 LTKP29376 864 aa27.92■■■□□ 2.06
DDX39A-214ENST00000590556 POLR1AO95602 1720 aaPredicted RBP27.92■■■□□ 2.06
DDX39A-214ENST00000590556 SCAF11Q99590 1463 aaKnown RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms