RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 ERBINQ96RT1 1412 aa22.04■■□□□ 1.12
SMARCA4-212ENST00000586985 RRBP1Q9P2E9 1410 aaKnown RBP22.04■■□□□ 1.12
SMARCA4-212ENST00000586985 CROCC2H7BZ55 1655 aa22.04■■□□□ 1.12
SMARCA4-212ENST00000586985 PTPRKQ15262 1439 aa22.03■■□□□ 1.12
SMARCA4-212ENST00000586985 ADGRL2O95490 1459 aa22.03■■□□□ 1.12
SMARCA4-212ENST00000586985 ROCK1Q13464 1354 aa21.99■■□□□ 1.11
SMARCA4-212ENST00000586985 KANK1Q14678 1352 aa21.99■■□□□ 1.11
SMARCA4-212ENST00000586985 ANKRD50Q9ULJ7 1429 aa21.97■■□□□ 1.11
SMARCA4-212ENST00000586985 HSPA2P54652 639 aa21.97■■□□□ 1.11
SMARCA4-212ENST00000586985 EIF2AK4Q9P2K8 1649 aaKnown RBP21.97■■□□□ 1.11
SMARCA4-212ENST00000586985 CLTCQ00610 1675 aaKnown RBP21.97■■□□□ 1.11
SMARCA4-212ENST00000586985 NPATQ14207 1427 aa21.97■■□□□ 1.11
SMARCA4-212ENST00000586985 KDM5DQ9BY66 1539 aa21.96■■□□□ 1.11
SMARCA4-212ENST00000586985 FAM135AQ9P2D6 1515 aa21.96■■□□□ 1.11
SMARCA4-212ENST00000586985 C3P01024 1663 aa21.95■■□□□ 1.1
SMARCA4-212ENST00000586985 FBXO31Q5XUX0 539 aaPredicted RBP21.95■■□□□ 1.1
SMARCA4-212ENST00000586985 UHRF1BP1Q6BDS2 1440 aa21.95■■□□□ 1.1
SMARCA4-212ENST00000586985 LMTK3Q96Q04 1460 aa21.94■■□□□ 1.1
SMARCA4-212ENST00000586985 MROH2AA6NES4 1674 aa21.94■■□□□ 1.1
SMARCA4-212ENST00000586985 RNF17Q9BXT8 1623 aaKnown RBP21.91■■□□□ 1.1
SMARCA4-212ENST00000586985 ABCC3O15438 1527 aa21.89■■□□□ 1.09
SMARCA4-212ENST00000586985 PZPP20742 1482 aa21.88■■□□□ 1.09
SMARCA4-212ENST00000586985 TNRQ92752 1358 aa21.87■■□□□ 1.09
SMARCA4-212ENST00000586985 SETD1BQ9UPS6 1966 aaKnown RBP21.85■■□□□ 1.09
SMARCA4-212ENST00000586985 MROH1Q8NDA8 1641 aa21.85■■□□□ 1.09
SMARCA4-212ENST00000586985 PREX1Q8TCU6 1659 aa21.85■■□□□ 1.09
SMARCA4-212ENST00000586985 PRDM15P57071 1507 aaPredicted RBP21.84■■□□□ 1.09
SMARCA4-212ENST00000586985 ZC3H13Q5T200 1668 aaKnown RBP21.82■■□□□ 1.08
SMARCA4-212ENST00000586985 ARHGAP31Q2M1Z3 1444 aa21.81■■□□□ 1.08
SMARCA4-212ENST00000586985 NUP155O75694 1391 aa21.81■■□□□ 1.08
SMARCA4-212ENST00000586985 DMRT2Q9Y5R5 561 aa21.8■■□□□ 1.08
SMARCA4-212ENST00000586985 DEPDC5O75140 1603 aa21.8■■□□□ 1.08
SMARCA4-212ENST00000586985 THEMISQ8N1K5 641 aaPredicted RBP21.78■■□□□ 1.08
SMARCA4-212ENST00000586985 NAIPQ13075 1403 aa21.78■■□□□ 1.08
SMARCA4-212ENST00000586985 LMTK2Q8IWU2 1503 aa21.77■■□□□ 1.08
SMARCA4-212ENST00000586985 TRIM52Q96A61 297 aa21.76■■□□□ 1.07
SMARCA4-212ENST00000586985 CAMSAP1Q5T5Y3 1602 aa21.76■■□□□ 1.07
SMARCA4-212ENST00000586985 A2ML1A8K2U0 1454 aa21.76■■□□□ 1.07
SMARCA4-212ENST00000586985 ERVK-7P63135 1459 aa21.76■■□□□ 1.07
SMARCA4-212ENST00000586985 CEP152O94986 1710 aa21.75■■□□□ 1.07
SMARCA4-212ENST00000586985 VWDEQ8N2E2 1590 aa21.75■■□□□ 1.07
SMARCA4-212ENST00000586985 NLRP1Q9C000 1473 aa21.74■■□□□ 1.07
SMARCA4-212ENST00000586985 HFM1A2PYH4 1435 aa21.73■■□□□ 1.07
SMARCA4-212ENST00000586985 PKD2Q13563 968 aa21.72■■□□□ 1.07
SMARCA4-212ENST00000586985 STAG3Q9UJ98 1225 aa21.72■■□□□ 1.07
SMARCA4-212ENST00000586985 SPATA31D1Q6ZQQ2 1576 aa21.72■■□□□ 1.07
SMARCA4-212ENST00000586985 CEP170BQ9Y4F5 1589 aaPredicted RBP21.72■■□□□ 1.07
SMARCA4-212ENST00000586985 MYO3AQ8NEV4 1616 aa21.71■■□□□ 1.07
SMARCA4-212ENST00000586985 NCKAP5LQ9HCH0 1330 aa21.71■■□□□ 1.07
SMARCA4-212ENST00000586985 SLC52A1Q9NWF4 448 aa21.7■■□□□ 1.06
SMARCA4-212ENST00000586985 UNC13BO14795 1591 aa21.7■■□□□ 1.06
SMARCA4-212ENST00000586985 IDI1Q13907 227 aa21.69■■□□□ 1.06
SMARCA4-212ENST00000586985 ANKLE2Q86XL3 938 aa21.69■■□□□ 1.06
SMARCA4-212ENST00000586985 EFCAB6Q5THR3 1501 aa21.67■■□□□ 1.06
SMARCA4-212ENST00000586985 RPRD2Q5VT52 1461 aaKnown RBP21.67■■□□□ 1.06
SMARCA4-212ENST00000586985 UGGT1Q9NYU2 1555 aa21.65■■□□□ 1.06
SMARCA4-212ENST00000586985 NOS1P29475 1434 aa21.65■■□□□ 1.06
SMARCA4-212ENST00000586985 PLA2R1Q13018 1463 aa21.64■■□□□ 1.06
SMARCA4-212ENST00000586985 ACIN1Q9UKV3 1341 aaKnown RBP21.64■■□□□ 1.05
SMARCA4-212ENST00000586985 ZNF142P52746 1687 aaPredicted RBP21.63■■□□□ 1.05
SMARCA4-212ENST00000586985 SLC4A1APQ9BWU0 796 aaKnown RBP21.63■■□□□ 1.05
SMARCA4-212ENST00000586985 PTPRTO14522 1441 aa21.63■■□□□ 1.05
SMARCA4-212ENST00000586985 TET3O43151 1660 aa21.63■■□□□ 1.05
SMARCA4-212ENST00000586985 SETD5Q9C0A6 1442 aa21.62■■□□□ 1.05
SMARCA4-212ENST00000586985 IQGAP3Q86VI3 1631 aa21.62■■□□□ 1.05
SMARCA4-212ENST00000586985 GCC2Q8IWJ2 1684 aa21.61■■□□□ 1.05
SMARCA4-212ENST00000586985 CFAP65Q6ZU64 1925 aaKnown RBP21.61■■□□□ 1.05
SMARCA4-212ENST00000586985 CHGAP10645 457 aaKnown RBP21.6■■□□□ 1.05
SMARCA4-212ENST00000586985 TXNDC2Q86VQ3 553 aa21.6■■□□□ 1.05
SMARCA4-212ENST00000586985 EID1Q9Y6B2 187 aa21.6■■□□□ 1.05
SMARCA4-212ENST00000586985 STRCQ7RTU9 1775 aa21.58■■□□□ 1.04
SMARCA4-212ENST00000586985 HDGFP51858 240 aaKnown RBP21.56■■□□□ 1.04
SMARCA4-212ENST00000586985 MPHOSPH9Q99550 1183 aa21.55■■□□□ 1.04
SMARCA4-212ENST00000586985 SYNMO15061 1565 aa21.54■■□□□ 1.04
SMARCA4-212ENST00000586985 TMEM2Q9UHN6 1383 aa21.53■■□□□ 1.04
SMARCA4-212ENST00000586985 LTKP29376 864 aa21.53■■□□□ 1.04
SMARCA4-212ENST00000586985 E9PCH4 1651 aa21.53■■□□□ 1.04
SMARCA4-212ENST00000586985 RAB3GAP2Q9H2M9 1393 aa21.51■■□□□ 1.03
SMARCA4-212ENST00000586985 PIK3C2BO00750 1634 aa21.51■■□□□ 1.03
SMARCA4-212ENST00000586985 NPHP4O75161 1426 aaPredicted RBP21.5■■□□□ 1.03
SMARCA4-212ENST00000586985 HRCP23327 699 aa21.5■■□□□ 1.03
SMARCA4-212ENST00000586985 BCANQ96GW7 911 aa21.49■■□□□ 1.03
SMARCA4-212ENST00000586985 UBR1Q8IWV7 1749 aa21.49■■□□□ 1.03
SMARCA4-212ENST00000586985 FOXD1Q16676 465 aa21.48■■□□□ 1.03
SMARCA4-212ENST00000586985 CERKQ8TCT0 537 aa21.48■■□□□ 1.03
SMARCA4-212ENST00000586985 ARHGAP23Q9P227 1491 aa21.47■■□□□ 1.03
SMARCA4-212ENST00000586985 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.47■■□□□ 1.03
SMARCA4-212ENST00000586985 MED14O60244 1454 aa21.46■■□□□ 1.03
SMARCA4-212ENST00000586985 SCAF11Q99590 1463 aaKnown RBP21.46■■□□□ 1.03
SMARCA4-212ENST00000586985 SLIT1O75093 1534 aa21.46■■□□□ 1.03
SMARCA4-212ENST00000586985 PPP1R15AO75807 674 aaPredicted RBP21.46■■□□□ 1.03
SMARCA4-212ENST00000586985 ZNF326Q5BKZ1 582 aaKnown RBP21.45■■□□□ 1.02
SMARCA4-212ENST00000586985 ZNF335Q9H4Z2 1342 aaPredicted RBP21.45■■□□□ 1.02
SMARCA4-212ENST00000586985 ADGRB3O60242 1522 aa21.45■■□□□ 1.02
SMARCA4-212ENST00000586985 KDM5AP29375 1690 aaKnown RBP21.42■■□□□ 1.02
SMARCA4-212ENST00000586985 NEURL4Q96JN8 1562 aa21.41■■□□□ 1.02
SMARCA4-212ENST00000586985 RIMS2Q9UQ26 1411 aa21.41■■□□□ 1.02
SMARCA4-212ENST00000586985 NUTM2DQ5VT03 806 aaPredicted RBP21.41■■□□□ 1.02
SMARCA4-212ENST00000586985 POLR1AO95602 1720 aaPredicted RBP21.39■■□□□ 1.01
SMARCA4-212ENST00000586985 SENP3Q9H4L4 574 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms