RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 LMOD2Q6P5Q4 547 aa10.62□□□□□ -0.71
SMAD4-203ENST00000585448 MAP3K7O43318 606 aa10.61□□□□□ -0.71
SMAD4-203ENST00000585448 PPP1R3GB7ZBB8 358 aa10.6□□□□□ -0.71
SMAD4-203ENST00000585448 ARHGAP33O14559 1287 aa10.6□□□□□ -0.71
SMAD4-203ENST00000585448 RBM26Q5T8P6 1007 aaKnown RBP10.6□□□□□ -0.71
SMAD4-203ENST00000585448 POTEEQ6S8J3 1075 aa10.6□□□□□ -0.71
SMAD4-203ENST00000585448 KCNH8Q96L42 1107 aa10.6□□□□□ -0.71
SMAD4-203ENST00000585448 SLC4A5Q9BY07 1137 aa10.59□□□□□ -0.71
SMAD4-203ENST00000585448 RBM27Q9P2N5 1060 aaKnown RBP10.59□□□□□ -0.71
SMAD4-203ENST00000585448 PCDH10Q9P2E7 1040 aa10.58□□□□□ -0.72
SMAD4-203ENST00000585448 GPR37O15354 613 aa10.57□□□□□ -0.72
SMAD4-203ENST00000585448 PTGDRQ13258 359 aa10.57□□□□□ -0.72
SMAD4-203ENST00000585448 TSR1Q2NL82 804 aaKnown RBP10.57□□□□□ -0.72
SMAD4-203ENST00000585448 RBM33Q96EV2 1170 aaKnown RBP10.57□□□□□ -0.72
SMAD4-203ENST00000585448 NPDC1Q9NQX5 325 aaPredicted RBP10.57□□□□□ -0.72
SMAD4-203ENST00000585448 GPIHBP1Q8IV16 184 aa10.56□□□□□ -0.72
SMAD4-203ENST00000585448 ONECUT3O60422 494 aaPredicted RBP10.55□□□□□ -0.72
SMAD4-203ENST00000585448 FCHSD2O94868 740 aa10.55□□□□□ -0.72
SMAD4-203ENST00000585448 HIC1Q14526 733 aa10.54□□□□□ -0.72
SMAD4-203ENST00000585448 CDHR5Q9HBB8 845 aa10.54□□□□□ -0.72
SMAD4-203ENST00000585448 TK2O00142 265 aa10.53□□□□□ -0.72
SMAD4-203ENST00000585448 KCNK17Q96T54 332 aa10.53□□□□□ -0.72
SMAD4-203ENST00000585448 NUTM2FA1L443 756 aa10.52□□□□□ -0.73
SMAD4-203ENST00000585448 COL9A1P20849 921 aa10.52□□□□□ -0.73
SMAD4-203ENST00000585448 CDAN1Q8IWY9 1227 aa10.52□□□□□ -0.73
SMAD4-203ENST00000585448 ZBED2Q9BTP6 218 aa10.52□□□□□ -0.73
SMAD4-203ENST00000585448 KRTAP3-3Q9BYR6 98 aa10.52□□□□□ -0.73
SMAD4-203ENST00000585448 KRTAP3-2Q9BYR7 98 aa10.52□□□□□ -0.73
SMAD4-203ENST00000585448 TTBK1Q5TCY1 1321 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-203ENST00000585448 PSEN2P49810 448 aa10.51□□□□□ -0.73
SMAD4-203ENST00000585448 LSM11P83369 360 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMAD4-203ENST00000585448 TTC13Q8NBP0 860 aa10.51□□□□□ -0.73
SMAD4-203ENST00000585448 GNPATO15228 680 aa10.49□□□□□ -0.73
SMAD4-203ENST00000585448 PRSS12P56730 875 aa10.49□□□□□ -0.73
SMAD4-203ENST00000585448 ZC3H15Q8WU90 426 aaKnown RBP10.49□□□□□ -0.73
SMAD4-203ENST00000585448 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
SMAD4-203ENST00000585448 ZMYND10O75800 440 aa10.48□□□□□ -0.73
SMAD4-203ENST00000585448 DMRTA1Q5VZB9 504 aa10.48□□□□□ -0.73
SMAD4-203ENST00000585448 TRIM6-TRIM34B2RNG4 842 aa10.47□□□□□ -0.73
SMAD4-203ENST00000585448 CDCA7LQ96GN5 454 aa10.47□□□□□ -0.73
SMAD4-203ENST00000585448 BARGINQ6ZT62 677 aa10.45□□□□□ -0.74
SMAD4-203ENST00000585448 RABGEF1Q9UJ41 708 aa10.45□□□□□ -0.74
SMAD4-203ENST00000585448 VPS9D1Q9Y2B5 631 aa10.45□□□□□ -0.74
SMAD4-203ENST00000585448 ADGRD1Q6QNK2 874 aa10.44□□□□□ -0.74
SMAD4-203ENST00000585448 HRO43593 1189 aa10.43□□□□□ -0.74
SMAD4-203ENST00000585448 TSKSQ9UJT2 592 aa10.43□□□□□ -0.74
SMAD4-203ENST00000585448 BHMG1C9JSJ3 638 aaPredicted RBP10.42□□□□□ -0.74
SMAD4-203ENST00000585448 MAP2K5Q13163 448 aa10.42□□□□□ -0.74
SMAD4-203ENST00000585448 PADI6Q6TGC4 694 aa10.42□□□□□ -0.74
SMAD4-203ENST00000585448 PROX2Q3B8N5 592 aa10.41□□□□□ -0.74
SMAD4-203ENST00000585448 MINK1Q8N4C8 1332 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-203ENST00000585448 PACS2Q86VP3 889 aa10.4□□□□□ -0.74
SMAD4-203ENST00000585448 FAM198AQ9UFP1 575 aa10.4□□□□□ -0.74
SMAD4-203ENST00000585448 NBPF26B4DH59 902 aa10.39□□□□□ -0.75
SMAD4-203ENST00000585448 NBPF3Q9H094 633 aa10.39□□□□□ -0.75
SMAD4-203ENST00000585448 LAPTM4BQ86VI4 370 aa10.38□□□□□ -0.75
SMAD4-203ENST00000585448 IRF6O14896 467 aa10.37□□□□□ -0.75
SMAD4-203ENST00000585448 FECHP22830 423 aa10.37□□□□□ -0.75
SMAD4-203ENST00000585448 KIAA1468Q9P260 1216 aa10.37□□□□□ -0.75
SMAD4-203ENST00000585448 ADGRG1Q9Y653 693 aa10.37□□□□□ -0.75
SMAD4-203ENST00000585448 OATP04181 439 aa10.36□□□□□ -0.75
SMAD4-203ENST00000585448 ANKRD13DQ6ZTN6 518 aa10.36□□□□□ -0.75
SMAD4-203ENST00000585448 TATDN2Q93075 761 aa10.35□□□□□ -0.75
SMAD4-203ENST00000585448 EYA1Q99502 592 aa10.35□□□□□ -0.75
SMAD4-203ENST00000585448 RBM46Q8TBY0 533 aaKnown RBP10.33□□□□□ -0.76
SMAD4-203ENST00000585448 PXYLP1Q8TE99 480 aa10.33□□□□□ -0.76
SMAD4-203ENST00000585448 FAM98CQ17RN3 349 aaKnown RBP10.32□□□□□ -0.76
SMAD4-203ENST00000585448 TPRNQ4KMQ1 711 aa10.32□□□□□ -0.76
SMAD4-203ENST00000585448 NUDT18Q6ZVK8 323 aa10.32□□□□□ -0.76
SMAD4-203ENST00000585448 METTL3Q86U44 580 aaKnown RBP10.32□□□□□ -0.76
SMAD4-203ENST00000585448 PNMA3Q9UL41 463 aa10.32□□□□□ -0.76
SMAD4-203ENST00000585448 CCDC102AQ96A19 550 aa10.31□□□□□ -0.76
SMAD4-203ENST00000585448 C3orf80F5H4A9 247 aa10.3□□□□□ -0.76
SMAD4-203ENST00000585448 MRPL50Q8N5N7 158 aaKnown RBP10.3□□□□□ -0.76
SMAD4-203ENST00000585448 AK7Q96M32 723 aa10.3□□□□□ -0.76
SMAD4-203ENST00000585448 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.29□□□□□ -0.76
SMAD4-203ENST00000585448 KRI1Q8N9T8 703 aaKnown RBP10.29□□□□□ -0.76
SMAD4-203ENST00000585448 DNAJB2P25686 324 aa10.27□□□□□ -0.77
SMAD4-203ENST00000585448 AMHR2Q16671 573 aa10.26□□□□□ -0.77
SMAD4-203ENST00000585448 SPNS2Q8IVW8 549 aa10.26□□□□□ -0.77
SMAD4-203ENST00000585448 STAC3Q96MF2 364 aa10.26□□□□□ -0.77
SMAD4-203ENST00000585448 SLC24A3Q9HC58 644 aa10.26□□□□□ -0.77
SMAD4-203ENST00000585448 ZFRQ96KR1 1074 aaKnown RBP10.25□□□□□ -0.77
SMAD4-203ENST00000585448 TMEM134Q9H6X4 195 aa10.25□□□□□ -0.77
SMAD4-203ENST00000585448 SEPT9Q9UHD8 586 aaPredicted RBP10.25□□□□□ -0.77
SMAD4-203ENST00000585448 RCCD1A6NED2 376 aa10.24□□□□□ -0.77
SMAD4-203ENST00000585448 SMAPO00193 183 aa10.24□□□□□ -0.77
SMAD4-203ENST00000585448 TRIM66O15016 1216 aa10.23□□□□□ -0.77
SMAD4-203ENST00000585448 FAM161AQ3B820 660 aa10.23□□□□□ -0.77
SMAD4-203ENST00000585448 PHOX2BQ99453 314 aa10.23□□□□□ -0.77
SMAD4-203ENST00000585448 TMUB1Q9BVT8 246 aa10.22□□□□□ -0.77
SMAD4-203ENST00000585448 MYT1LQ9UL68 1186 aa10.22□□□□□ -0.77
SMAD4-203ENST00000585448 ANKK1Q8NFD2 765 aa10.2□□□□□ -0.78
SMAD4-203ENST00000585448 PLSCR2Q9NRY7 297 aa10.2□□□□□ -0.78
SMAD4-203ENST00000585448 DAXXQ9UER7 740 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-203ENST00000585448 SOWAHBA6NEL2 793 aa10.19□□□□□ -0.78
SMAD4-203ENST00000585448 GOLGA8CPA6NN73 597 aa10.19□□□□□ -0.78
SMAD4-203ENST00000585448 HDGFP51858 240 aaKnown RBP10.19□□□□□ -0.78
SMAD4-203ENST00000585448 NECTIN2Q92692 538 aa10.19□□□□□ -0.78
SMAD4-203ENST00000585448 CLCN1P35523 988 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms