RNA–Protein interactions for RNA: ENST00000584130.1

RIOK3-209, Transcript of RIO kinase 3, humanhuman

TSL 4

Gene RIOK3, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-209ENST00000584130 E2F4Q16254 413 aa11.45□□□□□ -0.58
RIOK3-209ENST00000584130 PPP1R3GB7ZBB8 358 aa11.44□□□□□ -0.58
RIOK3-209ENST00000584130 WDR70Q9NW82 654 aa11.44□□□□□ -0.58
RIOK3-209ENST00000584130 STAC3Q96MF2 364 aa11.43□□□□□ -0.58
RIOK3-209ENST00000584130 EPAS1Q99814 870 aa11.43□□□□□ -0.58
RIOK3-209ENST00000584130 SPDYE16A6NNV3 312 aaPredicted RBP11.41□□□□□ -0.58
RIOK3-209ENST00000584130 ARIH1Q9Y4X5 557 aaPredicted RBP11.41□□□□□ -0.58
RIOK3-209ENST00000584130 DDX12PQ92771 950 aa11.4□□□□□ -0.58
RIOK3-209ENST00000584130 HCSTQ9UBK5 93 aa11.39□□□□□ -0.59
RIOK3-209ENST00000584130 BHMG1C9JSJ3 638 aaPredicted RBP11.38□□□□□ -0.59
RIOK3-209ENST00000584130 COL9A1P20849 921 aa11.38□□□□□ -0.59
RIOK3-209ENST00000584130 KCTD12Q96CX2 325 aaKnown RBP11.38□□□□□ -0.59
RIOK3-209ENST00000584130 NBPF3Q9H094 633 aa11.37□□□□□ -0.59
RIOK3-209ENST00000584130 NBR1Q14596 966 aa11.36□□□□□ -0.59
RIOK3-209ENST00000584130 PROX2Q3B8N5 592 aa11.35□□□□□ -0.59
RIOK3-209ENST00000584130 C6orf132Q5T0Z8 1188 aa11.35□□□□□ -0.59
RIOK3-209ENST00000584130 EN1Q05925 392 aaPredicted RBP11.34□□□□□ -0.59
RIOK3-209ENST00000584130 MRPL50Q8N5N7 158 aaKnown RBP11.34□□□□□ -0.59
RIOK3-209ENST00000584130 RBM33Q96EV2 1170 aaKnown RBP11.34□□□□□ -0.59
RIOK3-209ENST00000584130 RABGEF1Q9UJ41 708 aa11.33□□□□□ -0.6
RIOK3-209ENST00000584130 MAP3K7O43318 606 aa11.31□□□□□ -0.6
RIOK3-209ENST00000584130 GOLGA8CPA6NN73 597 aa11.29□□□□□ -0.6
RIOK3-209ENST00000584130 TSR1Q2NL82 804 aaKnown RBP11.28□□□□□ -0.6
RIOK3-209ENST00000584130 THSD4Q6ZMP0 1018 aa11.28□□□□□ -0.6
RIOK3-209ENST00000584130 WNT2BQ93097 391 aa11.28□□□□□ -0.6
RIOK3-209ENST00000584130 GRXCR2A6NFK2 248 aa11.26□□□□□ -0.61
RIOK3-209ENST00000584130 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
RIOK3-209ENST00000584130 ONECUT3O60422 494 aaPredicted RBP11.26□□□□□ -0.61
RIOK3-209ENST00000584130 PRIM1P49642 420 aaKnown RBP11.25□□□□□ -0.61
RIOK3-209ENST00000584130 PLA2G2EQ9NZK7 142 aa11.25□□□□□ -0.61
RIOK3-209ENST00000584130 KIAA1468Q9P260 1216 aa11.25□□□□□ -0.61
RIOK3-209ENST00000584130 PTPN5P54829 565 aa11.24□□□□□ -0.61
RIOK3-209ENST00000584130 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
RIOK3-209ENST00000584130 KCNV2Q8TDN2 545 aa11.24□□□□□ -0.61
RIOK3-209ENST00000584130 ANKK1Q8NFD2 765 aa11.23□□□□□ -0.61
RIOK3-209ENST00000584130 ARHGEF1Q92888 912 aaKnown RBP11.22□□□□□ -0.61
RIOK3-209ENST00000584130 OSBPP22059 807 aa11.21□□□□□ -0.61
RIOK3-209ENST00000584130 BCANQ96GW7 911 aa11.21□□□□□ -0.61
RIOK3-209ENST00000584130 SEPT9Q9UHD8 586 aaPredicted RBP11.21□□□□□ -0.61
RIOK3-209ENST00000584130 CERKQ8TCT0 537 aa11.19□□□□□ -0.62
RIOK3-209ENST00000584130 FAM98CQ17RN3 349 aaKnown RBP11.18□□□□□ -0.62
RIOK3-209ENST00000584130 ZFRQ96KR1 1074 aaKnown RBP11.18□□□□□ -0.62
RIOK3-209ENST00000584130 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
RIOK3-209ENST00000584130 TSKSQ9UJT2 592 aa11.18□□□□□ -0.62
RIOK3-209ENST00000584130 P3H3Q8IVL6 736 aa11.17□□□□□ -0.62
RIOK3-209ENST00000584130 BCAMP50895 628 aa11.16□□□□□ -0.62
RIOK3-209ENST00000584130 PRSS12P56730 875 aa11.16□□□□□ -0.62
RIOK3-209ENST00000584130 PACS2Q86VP3 889 aa11.16□□□□□ -0.62
RIOK3-209ENST00000584130 CDCA7LQ96GN5 454 aa11.16□□□□□ -0.62
RIOK3-209ENST00000584130 SOWAHBA6NEL2 793 aa11.15□□□□□ -0.62
RIOK3-209ENST00000584130 RBM27Q9P2N5 1060 aaKnown RBP11.13□□□□□ -0.63
RIOK3-209ENST00000584130 MLLT3P42568 568 aaPredicted RBP11.12□□□□□ -0.63
RIOK3-209ENST00000584130 FAM198AQ9UFP1 575 aa11.12□□□□□ -0.63
RIOK3-209ENST00000584130 NBPF26B4DH59 902 aa11.11□□□□□ -0.63
RIOK3-209ENST00000584130 LRCH3Q96II8 777 aa11.1□□□□□ -0.63
RIOK3-209ENST00000584130 NYAP1Q6ZVC0 841 aa11.08□□□□□ -0.64
RIOK3-209ENST00000584130 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.08□□□□□ -0.64
RIOK3-209ENST00000584130 SMAPO00193 183 aa11.07□□□□□ -0.64
RIOK3-209ENST00000584130 IFFO2Q5TF58 517 aa11.07□□□□□ -0.64
RIOK3-209ENST00000584130 C3orf80F5H4A9 247 aa11.06□□□□□ -0.64
RIOK3-209ENST00000584130 TATDN2Q93075 761 aa11.06□□□□□ -0.64
RIOK3-209ENST00000584130 NPDC1Q9NQX5 325 aaPredicted RBP11.06□□□□□ -0.64
RIOK3-209ENST00000584130 WBP1LQ9NX94 342 aa11.06□□□□□ -0.64
RIOK3-209ENST00000584130 PADI6Q6TGC4 694 aa11.05□□□□□ -0.64
RIOK3-209ENST00000584130 TTC13Q8NBP0 860 aa11.05□□□□□ -0.64
RIOK3-209ENST00000584130 TSR3Q9UJK0 312 aaKnown RBP11.05□□□□□ -0.64
RIOK3-209ENST00000584130 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
RIOK3-209ENST00000584130 HPS5Q9UPZ3 1129 aa11.05□□□□□ -0.64
RIOK3-209ENST00000584130 ITGBL1O95965 494 aaPredicted RBP11.03□□□□□ -0.64
RIOK3-209ENST00000584130 NUDT18Q6ZVK8 323 aa11.02□□□□□ -0.65
RIOK3-209ENST00000584130 SAMD7Q7Z3H4 446 aa11.02□□□□□ -0.65
RIOK3-209ENST00000584130 SEMA3EO15041 775 aa11□□□□□ -0.65
RIOK3-209ENST00000584130 PTGDRQ13258 359 aa10.99□□□□□ -0.65
RIOK3-209ENST00000584130 A0A0G2JS52 829 aa10.98□□□□□ -0.65
RIOK3-209ENST00000584130 PPP4CP60510 307 aa10.96□□□□□ -0.65
RIOK3-209ENST00000584130 NUTM2FA1L443 756 aa10.95□□□□□ -0.66
RIOK3-209ENST00000584130 TESPA1A2RU30 521 aaPredicted RBP10.94□□□□□ -0.66
RIOK3-209ENST00000584130 RNF40O75150 1001 aa10.94□□□□□ -0.66
RIOK3-209ENST00000584130 HDGFP51858 240 aaKnown RBP10.92□□□□□ -0.66
RIOK3-209ENST00000584130 EYA1Q99502 592 aa10.92□□□□□ -0.66
RIOK3-209ENST00000584130 RGS20O76081 388 aa10.91□□□□□ -0.66
RIOK3-209ENST00000584130 FCHSD2O94868 740 aa10.91□□□□□ -0.66
RIOK3-209ENST00000584130 KCNC4Q03721 635 aa10.91□□□□□ -0.66
RIOK3-209ENST00000584130 SWT1Q5T5J6 900 aaKnown RBP10.91□□□□□ -0.66
RIOK3-209ENST00000584130 PRKCSHP14314 528 aaPredicted RBP10.9□□□□□ -0.66
RIOK3-209ENST00000584130 SLF2Q8IX21 1173 aa10.89□□□□□ -0.67
RIOK3-209ENST00000584130 NECTIN2Q92692 538 aa10.89□□□□□ -0.67
RIOK3-209ENST00000584130 ADGRG1Q9Y653 693 aa10.89□□□□□ -0.67
RIOK3-209ENST00000584130 SMYD5Q6GMV2 418 aa10.88□□□□□ -0.67
RIOK3-209ENST00000584130 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.88□□□□□ -0.67
RIOK3-209ENST00000584130 DNAJB2P25686 324 aa10.87□□□□□ -0.67
RIOK3-209ENST00000584130 SLC4A3P48751 1232 aa10.87□□□□□ -0.67
RIOK3-209ENST00000584130 RBM46Q8TBY0 533 aaKnown RBP10.87□□□□□ -0.67
RIOK3-209ENST00000584130 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
RIOK3-209ENST00000584130 RBM26Q5T8P6 1007 aaKnown RBP10.86□□□□□ -0.67
RIOK3-209ENST00000584130 APLP1P51693 650 aa10.85□□□□□ -0.67
RIOK3-209ENST00000584130 TJAP1Q5JTD0 557 aa10.85□□□□□ -0.67
RIOK3-209ENST00000584130 MTRQ99707 1265 aa10.85□□□□□ -0.67
RIOK3-209ENST00000584130 HIC1Q14526 733 aa10.84□□□□□ -0.67
RIOK3-209ENST00000584130 TMEM134Q9H6X4 195 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms