RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 ABCA6Q8N139 1617 aa8.94□□□□□ -0.98
RNU4ATAC-201ENST00000580972 GGT6Q6P531 493 aa8.94□□□□□ -0.98
RNU4ATAC-201ENST00000580972 MAGI2Q86UL8 1455 aa8.94□□□□□ -0.98
RNU4ATAC-201ENST00000580972 HECW2Q9P2P5 1572 aa8.94□□□□□ -0.98
RNU4ATAC-201ENST00000580972 DIP2CQ9Y2E4 1556 aa8.94□□□□□ -0.98
RNU4ATAC-201ENST00000580972 KIDINS220Q9ULH0 1771 aa8.94□□□□□ -0.98
RNU4ATAC-201ENST00000580972 UNC13BO14795 1591 aa8.93□□□□□ -0.98
RNU4ATAC-201ENST00000580972 MROH1Q8NDA8 1641 aa8.92□□□□□ -0.98
RNU4ATAC-201ENST00000580972 TONSLQ96HA7 1378 aa8.92□□□□□ -0.98
RNU4ATAC-201ENST00000580972 L3MBTL2Q969R5 705 aa8.92□□□□□ -0.98
RNU4ATAC-201ENST00000580972 ZMYM4Q5VZL5 1548 aa8.91□□□□□ -0.98
RNU4ATAC-201ENST00000580972 MLECQ14165 292 aa8.91□□□□□ -0.98
RNU4ATAC-201ENST00000580972 KIF13AQ9H1H9 1805 aa8.91□□□□□ -0.98
RNU4ATAC-201ENST00000580972 TSPOAP1O95153 1857 aa8.9□□□□□ -0.98
RNU4ATAC-201ENST00000580972 PPP1R15AO75807 674 aaPredicted RBP8.9□□□□□ -0.98
RNU4ATAC-201ENST00000580972 RICTORQ6R327 1708 aa8.9□□□□□ -0.98
RNU4ATAC-201ENST00000580972 ATP10AO60312 1499 aa8.89□□□□□ -0.99
RNU4ATAC-201ENST00000580972 RPRD2Q5VT52 1461 aaKnown RBP8.89□□□□□ -0.99
RNU4ATAC-201ENST00000580972 KANK1Q14678 1352 aa8.89□□□□□ -0.99
RNU4ATAC-201ENST00000580972 NBPF8Q3BBV2 869 aa8.89□□□□□ -0.99
RNU4ATAC-201ENST00000580972 VWDEQ8N2E2 1590 aa8.89□□□□□ -0.99
RNU4ATAC-201ENST00000580972 ACIN1Q9UKV3 1341 aaKnown RBP8.88□□□□□ -0.99
RNU4ATAC-201ENST00000580972 PRDM15P57071 1507 aaPredicted RBP8.88□□□□□ -0.99
RNU4ATAC-201ENST00000580972 IQGAP3Q86VI3 1631 aa8.87□□□□□ -0.99
RNU4ATAC-201ENST00000580972 ABCC3O15438 1527 aa8.87□□□□□ -0.99
RNU4ATAC-201ENST00000580972 WASHC2CQ9Y4E1 1318 aa8.86□□□□□ -0.99
RNU4ATAC-201ENST00000580972 ARHGEF40Q8TER5 1519 aa8.86□□□□□ -0.99
RNU4ATAC-201ENST00000580972 RGL3Q3MIN7 710 aa8.86□□□□□ -0.99
RNU4ATAC-201ENST00000580972 ZNF326Q5BKZ1 582 aaKnown RBP8.86□□□□□ -0.99
RNU4ATAC-201ENST00000580972 NPATQ14207 1427 aa8.86□□□□□ -0.99
RNU4ATAC-201ENST00000580972 DEPDC5O75140 1603 aa8.85□□□□□ -0.99
RNU4ATAC-201ENST00000580972 HIRIP3Q9BW71 556 aaPredicted RBP8.85□□□□□ -0.99
RNU4ATAC-201ENST00000580972 KDM2AQ9Y2K7 1162 aa8.85□□□□□ -0.99
RNU4ATAC-201ENST00000580972 CCDC144AA2RUR9 1427 aa8.85□□□□□ -0.99
RNU4ATAC-201ENST00000580972 PTPRTO14522 1441 aa8.85□□□□□ -0.99
RNU4ATAC-201ENST00000580972 UGGT1Q9NYU2 1555 aa8.85□□□□□ -0.99
RNU4ATAC-201ENST00000580972 SIGLEC1Q9BZZ2 1709 aa8.85□□□□□ -0.99
RNU4ATAC-201ENST00000580972 LMTK2Q8IWU2 1503 aa8.85□□□□□ -0.99
RNU4ATAC-201ENST00000580972 ARID4BQ4LE39 1312 aaPredicted RBP8.84□□□□□ -0.99
RNU4ATAC-201ENST00000580972 RNF17Q9BXT8 1623 aaKnown RBP8.84□□□□□ -0.99
RNU4ATAC-201ENST00000580972 EIF2AK4Q9P2K8 1649 aaKnown RBP8.84□□□□□ -0.99
RNU4ATAC-201ENST00000580972 FBXO31Q5XUX0 539 aaPredicted RBP8.84□□□□□ -0.99
RNU4ATAC-201ENST00000580972 TIMELESSQ9UNS1 1208 aa8.84□□□□□ -0.99
RNU4ATAC-201ENST00000580972 ZNF316A6NFI3 1004 aaPredicted RBP8.83□□□□□ -1
RNU4ATAC-201ENST00000580972 EFCAB6Q5THR3 1501 aa8.83□□□□□ -1
RNU4ATAC-201ENST00000580972 AGLP35573 1532 aa8.82□□□□□ -1
RNU4ATAC-201ENST00000580972 DCAF11Q8TEB1 546 aa8.82□□□□□ -1
RNU4ATAC-201ENST00000580972 SPATA31E1Q6ZUB1 1445 aa8.81□□□□□ -1
RNU4ATAC-201ENST00000580972 TRPM2O94759 1503 aa8.8□□□□□ -1
RNU4ATAC-201ENST00000580972 CHGAP10645 457 aaKnown RBP8.8□□□□□ -1
RNU4ATAC-201ENST00000580972 PLPPR3Q6T4P5 718 aa8.8□□□□□ -1
RNU4ATAC-201ENST00000580972 REREQ9P2R6 1566 aa8.8□□□□□ -1
RNU4ATAC-201ENST00000580972 E9PCH4 1651 aa8.8□□□□□ -1
RNU4ATAC-201ENST00000580972 NOS1P29475 1434 aa8.8□□□□□ -1
RNU4ATAC-201ENST00000580972 TET3O43151 1660 aa8.79□□□□□ -1
RNU4ATAC-201ENST00000580972 HSPA5P11021 654 aaKnown RBP8.79□□□□□ -1
RNU4ATAC-201ENST00000580972 SENP3Q9H4L4 574 aaPredicted RBP8.79□□□□□ -1
RNU4ATAC-201ENST00000580972 CLTCL1P53675 1640 aa8.79□□□□□ -1
RNU4ATAC-201ENST00000580972 CEBPAP49715 358 aaPredicted RBP8.78□□□□□ -1
RNU4ATAC-201ENST00000580972 NUTM2DQ5VT03 806 aaPredicted RBP8.78□□□□□ -1
RNU4ATAC-201ENST00000580972 ARHGAP31Q2M1Z3 1444 aa8.78□□□□□ -1
RNU4ATAC-201ENST00000580972 CEP152O94986 1710 aa8.77□□□□□ -1
RNU4ATAC-201ENST00000580972 BCORL1Q5H9F3 1711 aa8.77□□□□□ -1
RNU4ATAC-201ENST00000580972 IDI1Q13907 227 aa8.77□□□□□ -1.01
RNU4ATAC-201ENST00000580972 NBPF1Q3BBV0 1214 aa8.77□□□□□ -1.01
RNU4ATAC-201ENST00000580972 UHRF1BP1Q6BDS2 1440 aa8.77□□□□□ -1.01
RNU4ATAC-201ENST00000580972 PRAG1Q86YV5 1406 aa8.77□□□□□ -1.01
RNU4ATAC-201ENST00000580972 CNTLNQ9NXG0 1405 aa8.77□□□□□ -1.01
RNU4ATAC-201ENST00000580972 ADGRF5Q8IZF2 1346 aa8.77□□□□□ -1.01
RNU4ATAC-201ENST00000580972 ERVK-7P63135 1459 aa8.77□□□□□ -1.01
RNU4ATAC-201ENST00000580972 ZMYM3Q14202 1370 aa8.76□□□□□ -1.01
RNU4ATAC-201ENST00000580972 SYNMO15061 1565 aa8.76□□□□□ -1.01
RNU4ATAC-201ENST00000580972 CAMSAP1Q5T5Y3 1602 aa8.75□□□□□ -1.01
RNU4ATAC-201ENST00000580972 C11orf95C9JLR9 678 aaPredicted RBP8.74□□□□□ -1.01
RNU4ATAC-201ENST00000580972 ESF1Q9H501 851 aaKnown RBP8.74□□□□□ -1.01
RNU4ATAC-201ENST00000580972 PPP6R1Q9UPN7 881 aa8.74□□□□□ -1.01
RNU4ATAC-201ENST00000580972 ADGRB3O60242 1522 aa8.74□□□□□ -1.01
RNU4ATAC-201ENST00000580972 RALGAPBQ86X10 1494 aa8.73□□□□□ -1.01
RNU4ATAC-201ENST00000580972 CARD11Q9BXL7 1154 aa8.73□□□□□ -1.01
RNU4ATAC-201ENST00000580972 CFAP70Q5T0N1 1121 aa8.72□□□□□ -1.01
RNU4ATAC-201ENST00000580972 DIEXFQ68CQ4 756 aaKnown RBP8.72□□□□□ -1.01
RNU4ATAC-201ENST00000580972 ROCK2O75116 1388 aaKnown RBP8.72□□□□□ -1.01
RNU4ATAC-201ENST00000580972 TNRQ92752 1358 aa8.72□□□□□ -1.01
RNU4ATAC-201ENST00000580972 USP47Q96K76 1375 aa8.72□□□□□ -1.01
RNU4ATAC-201ENST00000580972 EIF4G2P78344 907 aaKnown RBP eCLIP8.71□□□□□ -1.02
RNU4ATAC-201ENST00000580972 SPHKAPQ2M3C7 1700 aa8.71□□□□□ -1.02
RNU4ATAC-201ENST00000580972 CLTCQ00610 1675 aaKnown RBP8.7□□□□□ -1.02
RNU4ATAC-201ENST00000580972 SLC52A1Q9NWF4 448 aa8.7□□□□□ -1.02
RNU4ATAC-201ENST00000580972 SPATA31D1Q6ZQQ2 1576 aa8.69□□□□□ -1.02
RNU4ATAC-201ENST00000580972 MROH2AA6NES4 1674 aa8.69□□□□□ -1.02
RNU4ATAC-201ENST00000580972 DDX10Q13206 875 aaKnown RBP8.69□□□□□ -1.02
RNU4ATAC-201ENST00000580972 WASHC2AQ641Q2 1341 aa8.69□□□□□ -1.02
RNU4ATAC-201ENST00000580972 GPRASP1Q5JY77 1395 aa8.69□□□□□ -1.02
RNU4ATAC-201ENST00000580972 ZC3H13Q5T200 1668 aaKnown RBP8.69□□□□□ -1.02
RNU4ATAC-201ENST00000580972 ST20-MTHFSA0A0A6YYL1 179 aa8.68□□□□□ -1.02
RNU4ATAC-201ENST00000580972 TMEM132EQ6IEE7 984 aa8.68□□□□□ -1.02
RNU4ATAC-201ENST00000580972 STAG3Q9UJ98 1225 aa8.68□□□□□ -1.02
RNU4ATAC-201ENST00000580972 A2ML1A8K2U0 1454 aa8.68□□□□□ -1.02
RNU4ATAC-201ENST00000580972 MYOM2P54296 1465 aa8.68□□□□□ -1.02
RNU4ATAC-201ENST00000580972 PIK3C2BO00750 1634 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms