RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 EIF2AK4Q9P2K8 1649 aaKnown RBP21.22■□□□□ 0.99
SKA2-205ENST00000580541 GGT6Q6P531 493 aa21.21■□□□□ 0.99
SKA2-205ENST00000580541 ESF1Q9H501 851 aaKnown RBP21.2■□□□□ 0.98
SKA2-205ENST00000580541 KANK1Q14678 1352 aa21.2■□□□□ 0.98
SKA2-205ENST00000580541 TRIM52Q96A61 297 aa21.19■□□□□ 0.98
SKA2-205ENST00000580541 RAB3GAP2Q9H2M9 1393 aa21.18■□□□□ 0.98
SKA2-205ENST00000580541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.982e-10■□□□□ 10.6
SKA2-205ENST00000580541 BCORL1Q5H9F3 1711 aa21.16■□□□□ 0.98
SKA2-205ENST00000580541 MLECQ14165 292 aa21.15■□□□□ 0.98
SKA2-205ENST00000580541 WASHC2CQ9Y4E1 1318 aa21.14■□□□□ 0.97
SKA2-205ENST00000580541 NUP155O75694 1391 aa21.13■□□□□ 0.97
SKA2-205ENST00000580541 POTEDQ86YR6 584 aa21.1■□□□□ 0.97
SKA2-205ENST00000580541 RNF17Q9BXT8 1623 aaKnown RBP21.1■□□□□ 0.97
SKA2-205ENST00000580541 FAM135AQ9P2D6 1515 aa21.09■□□□□ 0.97
SKA2-205ENST00000580541 DEPDC5O75140 1603 aa21.07■□□□□ 0.96
SKA2-205ENST00000580541 UNC13BO14795 1591 aa21.06■□□□□ 0.96
SKA2-205ENST00000580541 CNTLNQ9NXG0 1405 aa21.06■□□□□ 0.96
SKA2-205ENST00000580541 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
SKA2-205ENST00000580541 PRDM15P57071 1507 aaPredicted RBP21.05■□□□□ 0.96
SKA2-205ENST00000580541 SIGLEC1Q9BZZ2 1709 aa21.04■□□□□ 0.96
SKA2-205ENST00000580541 MPHOSPH9Q99550 1183 aa21.04■□□□□ 0.96
SKA2-205ENST00000580541 KDM5DQ9BY66 1539 aa21.03■□□□□ 0.96
SKA2-205ENST00000580541 ZC3H13Q5T200 1668 aaKnown RBP21■□□□□ 0.95
SKA2-205ENST00000580541 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
SKA2-205ENST00000580541 MROH1Q8NDA8 1641 aa21■□□□□ 0.95
SKA2-205ENST00000580541 VWDEQ8N2E2 1590 aa20.99■□□□□ 0.95
SKA2-205ENST00000580541 LMTK2Q8IWU2 1503 aa20.99■□□□□ 0.95
SKA2-205ENST00000580541 ABCC3O15438 1527 aa20.98■□□□□ 0.95
SKA2-205ENST00000580541 ZMYM3Q14202 1370 aa20.97■□□□□ 0.95
SKA2-205ENST00000580541 PKD2Q13563 968 aa20.97■□□□□ 0.95
SKA2-205ENST00000580541 ADAMTSL3P82987 1691 aa20.96■□□□□ 0.95
SKA2-205ENST00000580541 FER1L4A9Z1Z3 1794 aa20.95■□□□□ 0.94
SKA2-205ENST00000580541 ARHGAP31Q2M1Z3 1444 aa20.95■□□□□ 0.94
SKA2-205ENST00000580541 TET3O43151 1660 aa20.94■□□□□ 0.94
SKA2-205ENST00000580541 PZPP20742 1482 aa20.94■□□□□ 0.94
SKA2-205ENST00000580541 RPRD2Q5VT52 1461 aaKnown RBP20.94■□□□□ 0.94
SKA2-205ENST00000580541 CLTCQ00610 1675 aaKnown RBP20.93■□□□□ 0.94
SKA2-205ENST00000580541 MROH2AA6NES4 1674 aa20.93■□□□□ 0.94
SKA2-205ENST00000580541 CEP152O94986 1710 aa20.92■□□□□ 0.94
SKA2-205ENST00000580541 CAMSAP1Q5T5Y3 1602 aa20.89■□□□□ 0.94
SKA2-205ENST00000580541 MADDQ8WXG6 1647 aa20.89■□□□□ 0.94
SKA2-205ENST00000580541 EFCAB6Q5THR3 1501 aa20.89■□□□□ 0.94
SKA2-205ENST00000580541 KDM4FA0A1W2PPD8 638 aa20.87■□□□□ 0.93
SKA2-205ENST00000580541 NPATQ14207 1427 aa20.87■□□□□ 0.93
SKA2-205ENST00000580541 RIMS1Q86UR5 1692 aaKnown RBP20.86■□□□□ 0.93
SKA2-205ENST00000580541 DHX57Q6P158 1386 aaKnown RBP20.86■□□□□ 0.93
SKA2-205ENST00000580541 CCER1Q8TC90 406 aaPredicted RBP20.86■□□□□ 0.93
SKA2-205ENST00000580541 CFAP65Q6ZU64 1925 aaKnown RBP20.86■□□□□ 0.93
SKA2-205ENST00000580541 CEBPAP49715 358 aaPredicted RBP20.84■□□□□ 0.93
SKA2-205ENST00000580541 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
SKA2-205ENST00000580541 SLC52A1Q9NWF4 448 aa20.84■□□□□ 0.93
SKA2-205ENST00000580541 SETD1BQ9UPS6 1966 aaKnown RBP20.84■□□□□ 0.93
SKA2-205ENST00000580541 E9PCH4 1651 aa20.83■□□□□ 0.93
SKA2-205ENST00000580541 CLSPNQ9HAW4 1339 aa20.83■□□□□ 0.93
SKA2-205ENST00000580541 PTPRMP28827 1452 aa20.83■□□□□ 0.93
SKA2-205ENST00000580541 FOXD1Q16676 465 aa20.83■□□□□ 0.93
SKA2-205ENST00000580541 FBXO31Q5XUX0 539 aaPredicted RBP20.83■□□□□ 0.93
SKA2-205ENST00000580541 C3P01024 1663 aa20.81■□□□□ 0.92
SKA2-205ENST00000580541 PTPRTO14522 1441 aa20.8■□□□□ 0.92
SKA2-205ENST00000580541 NOS1P29475 1434 aa20.79■□□□□ 0.92
SKA2-205ENST00000580541 TNRQ92752 1358 aa20.79■□□□□ 0.92
SKA2-205ENST00000580541 ANKRD30BQ9BXX2 1392 aa20.79■□□□□ 0.92
SKA2-205ENST00000580541 ERVK-7P63135 1459 aa20.79■□□□□ 0.92
SKA2-205ENST00000580541 PREX1Q8TCU6 1659 aa20.77■□□□□ 0.92
SKA2-205ENST00000580541 CCDC144AA2RUR9 1427 aa20.77■□□□□ 0.91
SKA2-205ENST00000580541 SPATA31D1Q6ZQQ2 1576 aa20.76■□□□□ 0.91
SKA2-205ENST00000580541 STAG3Q9UJ98 1225 aa20.76■□□□□ 0.91
SKA2-205ENST00000580541 SPHKAPQ2M3C7 1700 aa20.75■□□□□ 0.91
SKA2-205ENST00000580541 TRPM2O94759 1503 aa20.73■□□□□ 0.91
SKA2-205ENST00000580541 IDI1Q13907 227 aa20.73■□□□□ 0.91
SKA2-205ENST00000580541 NLRP1Q9C000 1473 aa20.73■□□□□ 0.91
SKA2-205ENST00000580541 PLA2R1Q13018 1463 aa20.71■□□□□ 0.91
SKA2-205ENST00000580541 CHGAP10645 457 aaKnown RBP20.7■□□□□ 0.9
SKA2-205ENST00000580541 HDGFP51858 240 aaKnown RBP20.69■□□□□ 0.9
SKA2-205ENST00000580541 NEUROD1Q13562 356 aa20.68■□□□□ 0.9
SKA2-205ENST00000580541 THEMISQ8N1K5 641 aaPredicted RBP20.68■□□□□ 0.9
SKA2-205ENST00000580541 UHRF1BP1Q6BDS2 1440 aa20.67■□□□□ 0.9
SKA2-205ENST00000580541 SYNMO15061 1565 aa20.67■□□□□ 0.9
SKA2-205ENST00000580541 SIN3AQ96ST3 1273 aa20.65■□□□□ 0.9
SKA2-205ENST00000580541 TIMELESSQ9UNS1 1208 aa20.65■□□□□ 0.9
SKA2-205ENST00000580541 KIF1BO60333 1816 aa20.64■□□□□ 0.9
SKA2-205ENST00000580541 ZNF326Q5BKZ1 582 aaKnown RBP20.64■□□□□ 0.89
SKA2-205ENST00000580541 STAC3Q96MF2 364 aa20.64■□□□□ 0.89
SKA2-205ENST00000580541 PIK3C2BO00750 1634 aa20.64■□□□□ 0.89
SKA2-205ENST00000580541 A2ML1A8K2U0 1454 aa20.63■□□□□ 0.89
SKA2-205ENST00000580541 RPGRIP1LQ68CZ1 1315 aa20.63■□□□□ 0.89
SKA2-205ENST00000580541 CLTCL1P53675 1640 aa20.62■□□□□ 0.89
SKA2-205ENST00000580541 RGL3Q3MIN7 710 aa20.61■□□□□ 0.89
SKA2-205ENST00000580541 UGGT1Q9NYU2 1555 aa20.6■□□□□ 0.89
SKA2-205ENST00000580541 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.6■□□□□ 0.89
SKA2-205ENST00000580541 KDM5AP29375 1690 aaKnown RBP20.6■□□□□ 0.89
SKA2-205ENST00000580541 NEURL4Q96JN8 1562 aa20.59■□□□□ 0.89
SKA2-205ENST00000580541 EID1Q9Y6B2 187 aa20.59■□□□□ 0.89
SKA2-205ENST00000580541 MYO3AQ8NEV4 1616 aa20.59■□□□□ 0.89
SKA2-205ENST00000580541 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
SKA2-205ENST00000580541 CEP170BQ9Y4F5 1589 aaPredicted RBP20.57■□□□□ 0.88
SKA2-205ENST00000580541 ADGRB3O60242 1522 aa20.57■□□□□ 0.88
SKA2-205ENST00000580541 VGFO15240 615 aaPredicted RBP20.56■□□□□ 0.88
SKA2-205ENST00000580541 TMEM131LA2VDJ0 1609 aa20.56■□□□□ 0.88
SKA2-205ENST00000580541 SPATA31E1Q6ZUB1 1445 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms