RNA–Protein interactions for RNA: ENST00000578412.1

TOP2A-204, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-204ENST00000578412 PLCB2Q00722 1185 aa9.57□□□□□ -0.88
TOP2A-204ENST00000578412 NBR1Q14596 966 aa9.57□□□□□ -0.88
TOP2A-204ENST00000578412 EPAS1Q99814 870 aa9.57□□□□□ -0.88
TOP2A-204ENST00000578412 ZBED2Q9BTP6 218 aa9.57□□□□□ -0.88
TOP2A-204ENST00000578412 GRXCR2A6NFK2 248 aa9.56□□□□□ -0.88
TOP2A-204ENST00000578412 C6orf132Q5T0Z8 1188 aa9.55□□□□□ -0.88
TOP2A-204ENST00000578412 PPP1R3GB7ZBB8 358 aa9.54□□□□□ -0.88
TOP2A-204ENST00000578412 PROX2Q3B8N5 592 aa9.54□□□□□ -0.88
TOP2A-204ENST00000578412 KCTD12Q96CX2 325 aaKnown RBP9.54□□□□□ -0.88
TOP2A-204ENST00000578412 SLC4A5Q9BY07 1137 aa9.54□□□□□ -0.88
TOP2A-204ENST00000578412 MAP3K7O43318 606 aa9.53□□□□□ -0.88
TOP2A-204ENST00000578412 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
TOP2A-204ENST00000578412 GOLGA8CPA6NN73 597 aa9.51□□□□□ -0.89
TOP2A-204ENST00000578412 TSR1Q2NL82 804 aaKnown RBP9.51□□□□□ -0.89
TOP2A-204ENST00000578412 MRPL50Q8N5N7 158 aaKnown RBP9.51□□□□□ -0.89
TOP2A-204ENST00000578412 KCNV2Q8TDN2 545 aa9.51□□□□□ -0.89
TOP2A-204ENST00000578412 HCSTQ9UBK5 93 aa9.51□□□□□ -0.89
TOP2A-204ENST00000578412 BHMG1C9JSJ3 638 aaPredicted RBP9.5□□□□□ -0.89
TOP2A-204ENST00000578412 HAP1P54257 671 aaPredicted RBP9.5□□□□□ -0.89
TOP2A-204ENST00000578412 EN1Q05925 392 aaPredicted RBP9.5□□□□□ -0.89
TOP2A-204ENST00000578412 PRIM1P49642 420 aaKnown RBP9.48□□□□□ -0.89
TOP2A-204ENST00000578412 NBPF3Q9H094 633 aa9.48□□□□□ -0.89
TOP2A-204ENST00000578412 PLA2G2EQ9NZK7 142 aa9.48□□□□□ -0.89
TOP2A-204ENST00000578412 PTPN5P54829 565 aa9.47□□□□□ -0.89
TOP2A-204ENST00000578412 ARHGEF1Q92888 912 aaKnown RBP9.47□□□□□ -0.89
TOP2A-204ENST00000578412 KIAA1468Q9P260 1216 aa9.47□□□□□ -0.89
TOP2A-204ENST00000578412 RABGEF1Q9UJ41 708 aa9.47□□□□□ -0.89
TOP2A-204ENST00000578412 OSBPP22059 807 aa9.45□□□□□ -0.9
TOP2A-204ENST00000578412 WNT2BQ93097 391 aa9.45□□□□□ -0.9
TOP2A-204ENST00000578412 TRIM6-TRIM34B2RNG4 842 aa9.43□□□□□ -0.9
TOP2A-204ENST00000578412 MLLT3P42568 568 aaPredicted RBP9.43□□□□□ -0.9
TOP2A-204ENST00000578412 SEPT9Q9UHD8 586 aaPredicted RBP9.43□□□□□ -0.9
TOP2A-204ENST00000578412 CDHR5Q9HBB8 845 aa9.42□□□□□ -0.9
TOP2A-204ENST00000578412 P3H3Q8IVL6 736 aa9.41□□□□□ -0.9
TOP2A-204ENST00000578412 THSD4Q6ZMP0 1018 aa9.4□□□□□ -0.9
TOP2A-204ENST00000578412 TSKSQ9UJT2 592 aa9.4□□□□□ -0.9
TOP2A-204ENST00000578412 CDCA7LQ96GN5 454 aa9.39□□□□□ -0.91
TOP2A-204ENST00000578412 ONECUT3O60422 494 aaPredicted RBP9.38□□□□□ -0.91
TOP2A-204ENST00000578412 PRSS12P56730 875 aa9.38□□□□□ -0.91
TOP2A-204ENST00000578412 PACS2Q86VP3 889 aa9.38□□□□□ -0.91
TOP2A-204ENST00000578412 ANKK1Q8NFD2 765 aa9.38□□□□□ -0.91
TOP2A-204ENST00000578412 SMAPO00193 183 aa9.37□□□□□ -0.91
TOP2A-204ENST00000578412 ZFRQ96KR1 1074 aaKnown RBP9.37□□□□□ -0.91
TOP2A-204ENST00000578412 SEMA3EO15041 775 aa9.36□□□□□ -0.91
TOP2A-204ENST00000578412 BCAMP50895 628 aa9.36□□□□□ -0.91
TOP2A-204ENST00000578412 LAPTM4BQ86VI4 370 aa9.36□□□□□ -0.91
TOP2A-204ENST00000578412 CERKQ8TCT0 537 aa9.36□□□□□ -0.91
TOP2A-204ENST00000578412 KDM2AQ9Y2K7 1162 aa9.36□□□□□ -0.91
TOP2A-204ENST00000578412 FAM198AQ9UFP1 575 aa9.35□□□□□ -0.91
TOP2A-204ENST00000578412 FAM98CQ17RN3 349 aaKnown RBP9.34□□□□□ -0.91
TOP2A-204ENST00000578412 C3orf80F5H4A9 247 aa9.32□□□□□ -0.92
TOP2A-204ENST00000578412 NPDC1Q9NQX5 325 aaPredicted RBP9.32□□□□□ -0.92
TOP2A-204ENST00000578412 PNMA3Q9UL41 463 aa9.32□□□□□ -0.92
TOP2A-204ENST00000578412 NUTM2FA1L443 756 aa9.31□□□□□ -0.92
TOP2A-204ENST00000578412 SOWAHBA6NEL2 793 aa9.31□□□□□ -0.92
TOP2A-204ENST00000578412 PADI6Q6TGC4 694 aa9.31□□□□□ -0.92
TOP2A-204ENST00000578412 TATDN2Q93075 761 aa9.31□□□□□ -0.92
TOP2A-204ENST00000578412 IFFO2Q5TF58 517 aa9.3□□□□□ -0.92
TOP2A-204ENST00000578412 NUDT18Q6ZVK8 323 aa9.3□□□□□ -0.92
TOP2A-204ENST00000578412 LRCH3Q96II8 777 aa9.3□□□□□ -0.92
TOP2A-204ENST00000578412 NBPF26B4DH59 902 aa9.29□□□□□ -0.92
TOP2A-204ENST00000578412 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.29□□□□□ -0.92
TOP2A-204ENST00000578412 WBP1LQ9NX94 342 aa9.28□□□□□ -0.92
TOP2A-204ENST00000578412 SAMD7Q7Z3H4 446 aa9.27□□□□□ -0.93
TOP2A-204ENST00000578412 HPS5Q9UPZ3 1129 aa9.27□□□□□ -0.93
TOP2A-204ENST00000578412 RBM27Q9P2N5 1060 aaKnown RBP9.26□□□□□ -0.93
TOP2A-204ENST00000578412 RNF40O75150 1001 aa9.25□□□□□ -0.93
TOP2A-204ENST00000578412 PTGDRQ13258 359 aa9.25□□□□□ -0.93
TOP2A-204ENST00000578412 VSIG10Q8N0Z9 540 aa9.25□□□□□ -0.93
TOP2A-204ENST00000578412 TESPA1A2RU30 521 aaPredicted RBP9.24□□□□□ -0.93
TOP2A-204ENST00000578412 RBM26Q5T8P6 1007 aaKnown RBP9.24□□□□□ -0.93
TOP2A-204ENST00000578412 TTC13Q8NBP0 860 aa9.24□□□□□ -0.93
TOP2A-204ENST00000578412 TSR3Q9UJK0 312 aaKnown RBP9.24□□□□□ -0.93
TOP2A-204ENST00000578412 NISCHQ9Y2I1 1504 aa9.24□□□□□ -0.93
TOP2A-204ENST00000578412 HDGFP51858 240 aaKnown RBP9.23□□□□□ -0.93
TOP2A-204ENST00000578412 PPP4CP60510 307 aa9.23□□□□□ -0.93
TOP2A-204ENST00000578412 SMYD5Q6GMV2 418 aa9.22□□□□□ -0.93
TOP2A-204ENST00000578412 FAM161AQ3B820 660 aa9.21□□□□□ -0.94
TOP2A-204ENST00000578412 FCHSD2O94868 740 aa9.2□□□□□ -0.94
TOP2A-204ENST00000578412 SWT1Q5T5J6 900 aaKnown RBP9.19□□□□□ -0.94
TOP2A-204ENST00000578412 A0A0G2JS52 829 aa9.18□□□□□ -0.94
TOP2A-204ENST00000578412 RGS20O76081 388 aa9.18□□□□□ -0.94
TOP2A-204ENST00000578412 NYAP1Q6ZVC0 841 aa9.18□□□□□ -0.94
TOP2A-204ENST00000578412 EYA1Q99502 592 aa9.18□□□□□ -0.94
TOP2A-204ENST00000578412 ADGRG1Q9Y653 693 aa9.16□□□□□ -0.94
TOP2A-204ENST00000578412 RBM46Q8TBY0 533 aaKnown RBP9.15□□□□□ -0.94
TOP2A-204ENST00000578412 ITGBL1O95965 494 aaPredicted RBP9.14□□□□□ -0.95
TOP2A-204ENST00000578412 SLF2Q8IX21 1173 aa9.13□□□□□ -0.95
TOP2A-204ENST00000578412 FECHP22830 423 aa9.12□□□□□ -0.95
TOP2A-204ENST00000578412 DNAJB2P25686 324 aa9.12□□□□□ -0.95
TOP2A-204ENST00000578412 SLC4A3P48751 1232 aa9.12□□□□□ -0.95
TOP2A-204ENST00000578412 KCNC4Q03721 635 aa9.12□□□□□ -0.95
TOP2A-204ENST00000578412 HIC1Q14526 733 aa9.12□□□□□ -0.95
TOP2A-204ENST00000578412 RCCD1A6NED2 376 aa9.11□□□□□ -0.95
TOP2A-204ENST00000578412 APLP1P51693 650 aa9.11□□□□□ -0.95
TOP2A-204ENST00000578412 GNPATO15228 680 aa9.1□□□□□ -0.95
TOP2A-204ENST00000578412 GPIHBP1Q8IV16 184 aa9.1□□□□□ -0.95
TOP2A-204ENST00000578412 GPR37O15354 613 aa9.08□□□□□ -0.96
TOP2A-204ENST00000578412 MTRQ99707 1265 aa9.08□□□□□ -0.96
TOP2A-204ENST00000578412 TMEM134Q9H6X4 195 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms