RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 FOSBP53539 338 aa19.65■□□□□ 0.74
CACNA1A-202ENST00000573710 HSP90AB2PQ58FF8 381 aa19.65■□□□□ 0.74
CACNA1A-202ENST00000573710 IBSPP21815 317 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-202ENST00000573710 GGT6Q6P531 493 aa19.65■□□□□ 0.74
CACNA1A-202ENST00000573710 DCAF11Q8TEB1 546 aa19.64■□□□□ 0.73
CACNA1A-202ENST00000573710 NOL10Q9BSC4 688 aaKnown RBP19.64■□□□□ 0.73
CACNA1A-202ENST00000573710 MTMR7Q9Y216 660 aa19.64■□□□□ 0.73
CACNA1A-202ENST00000573710 TMEM132AQ24JP5 1023 aa19.63■□□□□ 0.73
CACNA1A-202ENST00000573710 NUTM2DQ5VT03 806 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-202ENST00000573710 STK31Q9BXU1 1019 aa19.62■□□□□ 0.73
CACNA1A-202ENST00000573710 CALD1Q05682 793 aaKnown RBP19.62■□□□□ 0.73
CACNA1A-202ENST00000573710 HSP90AA2PQ14568 343 aaPredicted RBP19.62■□□□□ 0.73
CACNA1A-202ENST00000573710 GOLGA6L19H0YKK7 550 aa19.62■□□□□ 0.73
CACNA1A-202ENST00000573710 KAT6BQ8WYB5 2073 aa19.62■□□□□ 0.73
CACNA1A-202ENST00000573710 KIF16BQ96L93 1317 aa19.61■□□□□ 0.73
CACNA1A-202ENST00000573710 SPAG9O60271 1321 aaKnown RBP19.61■□□□□ 0.73
CACNA1A-202ENST00000573710 VPS37DQ86XT2 251 aa19.61■□□□□ 0.73
CACNA1A-202ENST00000573710 KDM4AO75164 1064 aa19.61■□□□□ 0.73
CACNA1A-202ENST00000573710 U2AF1L5P0DN76 240 aaPredicted RBP19.61■□□□□ 0.73
CACNA1A-202ENST00000573710 U2AF1Q01081 240 aaKnown RBP eCLIP19.61■□□□□ 0.73
CACNA1A-202ENST00000573710 HOMER1Q86YM7 354 aa19.6■□□□□ 0.73
CACNA1A-202ENST00000573710 TTLL5Q6EMB2 1281 aa19.6■□□□□ 0.73
CACNA1A-202ENST00000573710 HDGFL2Q7Z4V5 671 aaPredicted RBP19.6■□□□□ 0.73
CACNA1A-202ENST00000573710 FAM184AQ8NB25 1140 aa19.6■□□□□ 0.73
CACNA1A-202ENST00000573710 RILPL2Q969X0 211 aa19.6■□□□□ 0.73
CACNA1A-202ENST00000573710 PPP4R2Q9NY27 417 aa19.6■□□□□ 0.73
CACNA1A-202ENST00000573710 ANKRD62A6NC57 917 aa19.6■□□□□ 0.73
CACNA1A-202ENST00000573710 TPM1P09493 284 aa19.59■□□□□ 0.73
CACNA1A-202ENST00000573710 R3HCC1Q9Y3T6 440 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-202ENST00000573710 TIMELESSQ9UNS1 1208 aa19.59■□□□□ 0.73
CACNA1A-202ENST00000573710 RUFY1Q96T51 708 aa19.59■□□□□ 0.73
CACNA1A-202ENST00000573710 FYB1O15117 783 aa19.59■□□□□ 0.73
CACNA1A-202ENST00000573710 AMOTL1Q8IY63 956 aa19.58■□□□□ 0.73
CACNA1A-202ENST00000573710 TMF1P82094 1093 aa19.58■□□□□ 0.72
CACNA1A-202ENST00000573710 GOLGA6L3A6NEY3 463 aa19.58■□□□□ 0.72
CACNA1A-202ENST00000573710 CCAR1Q8IX12 1150 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-202ENST00000573710 IPO8O15397 1037 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-202ENST00000573710 GPS2Q13227 327 aa19.57■□□□□ 0.72
CACNA1A-202ENST00000573710 CSPP1Q1MSJ5 1256 aa19.56■□□□□ 0.72
CACNA1A-202ENST00000573710 HSP90AB3PQ58FF7 597 aa19.56■□□□□ 0.72
CACNA1A-202ENST00000573710 NEFHP12036 1026 aa19.55■□□□□ 0.72
CACNA1A-202ENST00000573710 NGDNQ8NEJ9 315 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-202ENST00000573710 CFAP44Q96MT7 982 aa19.53■□□□□ 0.72
CACNA1A-202ENST00000573710 AMPHP49418 695 aa19.53■□□□□ 0.72
CACNA1A-202ENST00000573710 BECN2A8MW95 431 aa19.53■□□□□ 0.72
CACNA1A-202ENST00000573710 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.52■□□□□ 0.72
CACNA1A-202ENST00000573710 SYNE3Q6ZMZ3 975 aa19.52■□□□□ 0.72
CACNA1A-202ENST00000573710 CLUAP1Q96AJ1 413 aa19.52■□□□□ 0.72
CACNA1A-202ENST00000573710 EPS15P42566 896 aa19.51■□□□□ 0.71
CACNA1A-202ENST00000573710 IKQ13123 557 aaPredicted RBP19.5■□□□□ 0.71
CACNA1A-202ENST00000573710 SMC4Q9NTJ3 1288 aa19.5■□□□□ 0.71
CACNA1A-202ENST00000573710 NECTIN2Q92692 538 aa19.5■□□□□ 0.71
CACNA1A-202ENST00000573710 HMMRO75330 724 aa19.49■□□□□ 0.71
CACNA1A-202ENST00000573710 KANK1Q14678 1352 aa19.49■□□□□ 0.71
CACNA1A-202ENST00000573710 PHF14O94880 888 aa19.48■□□□□ 0.71
CACNA1A-202ENST00000573710 IPO7O95373 1038 aaKnown RBP19.48■□□□□ 0.71
CACNA1A-202ENST00000573710 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
CACNA1A-202ENST00000573710 CCDC191Q8NCU4 936 aa19.47■□□□□ 0.71
CACNA1A-202ENST00000573710 TRIM29Q14134 588 aa19.46■□□□□ 0.71
CACNA1A-202ENST00000573710 TEX35Q5T0J7 233 aa19.46■□□□□ 0.71
CACNA1A-202ENST00000573710 H0YHG0 523 aa19.46■□□□□ 0.71
CACNA1A-202ENST00000573710 WWC2Q6AWC2 1192 aa19.46■□□□□ 0.71
CACNA1A-202ENST00000573710 SIN3AQ96ST3 1273 aa19.46■□□□□ 0.71
CACNA1A-202ENST00000573710 BCCIPQ9P287 314 aaKnown RBP eCLIP19.45■□□□□ 0.7
CACNA1A-202ENST00000573710 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-202ENST00000573710 NFXL1Q6ZNB6 911 aa19.44■□□□□ 0.7
CACNA1A-202ENST00000573710 FAM13BQ9NYF5 915 aa19.43■□□□□ 0.7
CACNA1A-202ENST00000573710 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-202ENST00000573710 CCDC27Q2M243 656 aa19.42■□□□□ 0.7
CACNA1A-202ENST00000573710 RWDD1Q9H446 243 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-202ENST00000573710 EIF2S2P20042 333 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-202ENST00000573710 RBM33Q96EV2 1170 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-202ENST00000573710 RDXP35241 583 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-202ENST00000573710 CAGE1Q8TC20 777 aa19.4■□□□□ 0.7
CACNA1A-202ENST00000573710 KIF3AQ9Y496 699 aa19.4■□□□□ 0.7
CACNA1A-202ENST00000573710 ELL2O00472 640 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-202ENST00000573710 CCDC47Q96A33 483 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-202ENST00000573710 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
CACNA1A-202ENST00000573710 C1orf141Q5JVX7 400 aa19.38■□□□□ 0.69
CACNA1A-202ENST00000573710 LMOD3Q0VAK6 560 aa19.38■□□□□ 0.69
CACNA1A-202ENST00000573710 ENOX2Q16206 610 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-202ENST00000573710 HMGN5P82970 282 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-202ENST00000573710 PLIN1O60240 522 aa19.38■□□□□ 0.69
CACNA1A-202ENST00000573710 ST18O60284 1047 aa19.38■□□□□ 0.69
CACNA1A-202ENST00000573710 PDILTQ8N807 584 aa19.37■□□□□ 0.69
CACNA1A-202ENST00000573710 ANKRD20A12PQ8NF67 263 aa19.36■□□□□ 0.69
CACNA1A-202ENST00000573710 SEPT7Q16181 437 aaKnown RBP19.36■□□□□ 0.69
CACNA1A-202ENST00000573710 STK11IPQ8N1F8 1099 aa19.36■□□□□ 0.69
CACNA1A-202ENST00000573710 PSMD1Q99460 953 aa19.36■□□□□ 0.69
CACNA1A-202ENST00000573710 OFD1O75665 1012 aa19.34■□□□□ 0.69
CACNA1A-202ENST00000573710 FAM177BA6PVY3 158 aa19.34■□□□□ 0.69
CACNA1A-202ENST00000573710 TTC16Q8NEE8 873 aa19.34■□□□□ 0.69
CACNA1A-202ENST00000573710 FOXD1Q16676 465 aa19.34■□□□□ 0.69
CACNA1A-202ENST00000573710 ERICH2A1L162 156 aa19.34■□□□□ 0.69
CACNA1A-202ENST00000573710 NOM1Q5C9Z4 860 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-202ENST00000573710 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-202ENST00000573710 EID1Q9Y6B2 187 aa19.33■□□□□ 0.69
CACNA1A-202ENST00000573710 TSPYL1Q9H0U9 437 aa19.33■□□□□ 0.69
CACNA1A-202ENST00000573710 PLCD3Q8N3E9 789 aa19.33■□□□□ 0.69
CACNA1A-202ENST00000573710 CPLX1O14810 134 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms