RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 EPAS1Q99814 870 aa11.03□□□□□ -0.64
KARSP3-201ENST00000571212 PROX2Q3B8N5 592 aa11.02□□□□□ -0.65
KARSP3-201ENST00000571212 SLC4A5Q9BY07 1137 aa11.02□□□□□ -0.65
KARSP3-201ENST00000571212 SPDYE16A6NNV3 312 aaPredicted RBP11.01□□□□□ -0.65
KARSP3-201ENST00000571212 NBR1Q14596 966 aa11.01□□□□□ -0.65
KARSP3-201ENST00000571212 C6orf132Q5T0Z8 1188 aa11.01□□□□□ -0.65
KARSP3-201ENST00000571212 STAC3Q96MF2 364 aa11.01□□□□□ -0.65
KARSP3-201ENST00000571212 ARIH1Q9Y4X5 557 aaPredicted RBP11.01□□□□□ -0.65
KARSP3-201ENST00000571212 GRXCR2A6NFK2 248 aa11□□□□□ -0.65
KARSP3-201ENST00000571212 BHMG1C9JSJ3 638 aaPredicted RBP11□□□□□ -0.65
KARSP3-201ENST00000571212 PLCB2Q00722 1185 aa11□□□□□ -0.65
KARSP3-201ENST00000571212 KCTD12Q96CX2 325 aaKnown RBP11□□□□□ -0.65
KARSP3-201ENST00000571212 PPP1R3GB7ZBB8 358 aa10.99□□□□□ -0.65
KARSP3-201ENST00000571212 PRIM1P49642 420 aaKnown RBP10.99□□□□□ -0.65
KARSP3-201ENST00000571212 TSR1Q2NL82 804 aaKnown RBP10.98□□□□□ -0.65
KARSP3-201ENST00000571212 KCNV2Q8TDN2 545 aa10.97□□□□□ -0.65
KARSP3-201ENST00000571212 MAP3K7O43318 606 aa10.95□□□□□ -0.66
KARSP3-201ENST00000571212 EN1Q05925 392 aaPredicted RBP10.95□□□□□ -0.66
KARSP3-201ENST00000571212 MRPL50Q8N5N7 158 aaKnown RBP10.93□□□□□ -0.66
KARSP3-201ENST00000571212 KIAA1468Q9P260 1216 aa10.92□□□□□ -0.66
KARSP3-201ENST00000571212 HCSTQ9UBK5 93 aa10.92□□□□□ -0.66
KARSP3-201ENST00000571212 OSBPP22059 807 aa10.91□□□□□ -0.66
KARSP3-201ENST00000571212 RABGEF1Q9UJ41 708 aa10.91□□□□□ -0.66
KARSP3-201ENST00000571212 PTPN5P54829 565 aa10.89□□□□□ -0.67
KARSP3-201ENST00000571212 ARHGEF1Q92888 912 aaKnown RBP10.89□□□□□ -0.67
KARSP3-201ENST00000571212 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
KARSP3-201ENST00000571212 GOLGA8CPA6NN73 597 aa10.89□□□□□ -0.67
KARSP3-201ENST00000571212 MLLT3P42568 568 aaPredicted RBP10.88□□□□□ -0.67
KARSP3-201ENST00000571212 WNT2BQ93097 391 aa10.88□□□□□ -0.67
KARSP3-201ENST00000571212 CDHR5Q9HBB8 845 aa10.88□□□□□ -0.67
KARSP3-201ENST00000571212 SEPT9Q9UHD8 586 aaPredicted RBP10.88□□□□□ -0.67
KARSP3-201ENST00000571212 TRIM6-TRIM34B2RNG4 842 aa10.87□□□□□ -0.67
KARSP3-201ENST00000571212 HAP1P54257 671 aaPredicted RBP10.87□□□□□ -0.67
KARSP3-201ENST00000571212 TSKSQ9UJT2 592 aa10.87□□□□□ -0.67
KARSP3-201ENST00000571212 THSD4Q6ZMP0 1018 aa10.85□□□□□ -0.67
KARSP3-201ENST00000571212 FAM198AQ9UFP1 575 aa10.84□□□□□ -0.67
KARSP3-201ENST00000571212 ONECUT3O60422 494 aaPredicted RBP10.83□□□□□ -0.68
KARSP3-201ENST00000571212 CDCA7LQ96GN5 454 aa10.82□□□□□ -0.68
KARSP3-201ENST00000571212 C3orf80F5H4A9 247 aa10.81□□□□□ -0.68
KARSP3-201ENST00000571212 PRSS12P56730 875 aa10.81□□□□□ -0.68
KARSP3-201ENST00000571212 ZFRQ96KR1 1074 aaKnown RBP10.81□□□□□ -0.68
KARSP3-201ENST00000571212 SMAPO00193 183 aa10.8□□□□□ -0.68
KARSP3-201ENST00000571212 BCAMP50895 628 aa10.8□□□□□ -0.68
KARSP3-201ENST00000571212 SEMA3EO15041 775 aa10.79□□□□□ -0.68
KARSP3-201ENST00000571212 PLA2G2EQ9NZK7 142 aa10.79□□□□□ -0.68
KARSP3-201ENST00000571212 KDM2AQ9Y2K7 1162 aa10.79□□□□□ -0.68
KARSP3-201ENST00000571212 LAPTM4BQ86VI4 370 aa10.79□□□□□ -0.68
KARSP3-201ENST00000571212 PACS2Q86VP3 889 aa10.79□□□□□ -0.68
KARSP3-201ENST00000571212 P3H3Q8IVL6 736 aa10.79□□□□□ -0.68
KARSP3-201ENST00000571212 ANKK1Q8NFD2 765 aa10.79□□□□□ -0.68
KARSP3-201ENST00000571212 NPDC1Q9NQX5 325 aaPredicted RBP10.79□□□□□ -0.68
KARSP3-201ENST00000571212 FAM98CQ17RN3 349 aaKnown RBP10.76□□□□□ -0.69
KARSP3-201ENST00000571212 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
KARSP3-201ENST00000571212 SOWAHBA6NEL2 793 aa10.74□□□□□ -0.69
KARSP3-201ENST00000571212 PNMA3Q9UL41 463 aa10.74□□□□□ -0.69
KARSP3-201ENST00000571212 PADI6Q6TGC4 694 aa10.73□□□□□ -0.69
KARSP3-201ENST00000571212 TATDN2Q93075 761 aa10.73□□□□□ -0.69
KARSP3-201ENST00000571212 NUDT18Q6ZVK8 323 aa10.72□□□□□ -0.69
KARSP3-201ENST00000571212 WBP1LQ9NX94 342 aa10.71□□□□□ -0.69
KARSP3-201ENST00000571212 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.69□□□□□ -0.7
KARSP3-201ENST00000571212 NUTM2FA1L443 756 aa10.68□□□□□ -0.7
KARSP3-201ENST00000571212 NBPF26B4DH59 902 aa10.68□□□□□ -0.7
KARSP3-201ENST00000571212 SAMD7Q7Z3H4 446 aa10.68□□□□□ -0.7
KARSP3-201ENST00000571212 LRCH3Q96II8 777 aa10.68□□□□□ -0.7
KARSP3-201ENST00000571212 TTC13Q8NBP0 860 aa10.68□□□□□ -0.7
KARSP3-201ENST00000571212 RBM27Q9P2N5 1060 aaKnown RBP10.68□□□□□ -0.7
KARSP3-201ENST00000571212 HPS5Q9UPZ3 1129 aa10.68□□□□□ -0.7
KARSP3-201ENST00000571212 PTGDRQ13258 359 aa10.67□□□□□ -0.7
KARSP3-201ENST00000571212 TESPA1A2RU30 521 aaPredicted RBP10.65□□□□□ -0.7
KARSP3-201ENST00000571212 ABCC9O60706 1549 aa10.65□□□□□ -0.71
KARSP3-201ENST00000571212 RBM26Q5T8P6 1007 aaKnown RBP10.64□□□□□ -0.71
KARSP3-201ENST00000571212 TSR3Q9UJK0 312 aaKnown RBP10.64□□□□□ -0.71
KARSP3-201ENST00000571212 FAM161AQ3B820 660 aa10.63□□□□□ -0.71
KARSP3-201ENST00000571212 VSIG10Q8N0Z9 540 aa10.61□□□□□ -0.71
KARSP3-201ENST00000571212 EYA1Q99502 592 aa10.61□□□□□ -0.71
KARSP3-201ENST00000571212 RNF40O75150 1001 aa10.6□□□□□ -0.71
KARSP3-201ENST00000571212 PPP4CP60510 307 aa10.6□□□□□ -0.71
KARSP3-201ENST00000571212 CCDC180Q9P1Z9 1646 aa10.59□□□□□ -0.71
KARSP3-201ENST00000571212 SWT1Q5T5J6 900 aaKnown RBP10.58□□□□□ -0.72
KARSP3-201ENST00000571212 FCHSD2O94868 740 aa10.58□□□□□ -0.72
KARSP3-201ENST00000571212 NYAP1Q6ZVC0 841 aa10.57□□□□□ -0.72
KARSP3-201ENST00000571212 HDGFP51858 240 aaKnown RBP10.56□□□□□ -0.72
KARSP3-201ENST00000571212 ADGRG1Q9Y653 693 aa10.56□□□□□ -0.72
KARSP3-201ENST00000571212 ITGBL1O95965 494 aaPredicted RBP10.55□□□□□ -0.72
KARSP3-201ENST00000571212 IFFO2Q5TF58 517 aa10.55□□□□□ -0.72
KARSP3-201ENST00000571212 SMYD5Q6GMV2 418 aa10.55□□□□□ -0.72
KARSP3-201ENST00000571212 FECHP22830 423 aa10.54□□□□□ -0.72
KARSP3-201ENST00000571212 GPR37O15354 613 aa10.52□□□□□ -0.73
KARSP3-201ENST00000571212 APLP1P51693 650 aa10.52□□□□□ -0.73
KARSP3-201ENST00000571212 A0A0G2JS52 829 aa10.51□□□□□ -0.73
KARSP3-201ENST00000571212 KCNC4Q03721 635 aa10.51□□□□□ -0.73
KARSP3-201ENST00000571212 RBM46Q8TBY0 533 aaKnown RBP10.51□□□□□ -0.73
KARSP3-201ENST00000571212 RCCD1A6NED2 376 aa10.5□□□□□ -0.73
KARSP3-201ENST00000571212 HIC1Q14526 733 aa10.5□□□□□ -0.73
KARSP3-201ENST00000571212 DNAJB2P25686 324 aa10.48□□□□□ -0.73
KARSP3-201ENST00000571212 TJAP1Q5JTD0 557 aa10.48□□□□□ -0.73
KARSP3-201ENST00000571212 SLF2Q8IX21 1173 aa10.48□□□□□ -0.73
KARSP3-201ENST00000571212 GNPATO15228 680 aa10.47□□□□□ -0.73
KARSP3-201ENST00000571212 MTRQ99707 1265 aa10.47□□□□□ -0.73
KARSP3-201ENST00000571212 TMEM134Q9H6X4 195 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms