RNA–Protein interactions for RNA: ENST00000570513.5

CALCOCO2-225, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-225ENST00000570513 UNC13BO14795 1591 aa17.15■□□□□ 0.34
CALCOCO2-225ENST00000570513 REREQ9P2R6 1566 aa17.13■□□□□ 0.33
CALCOCO2-225ENST00000570513 DHX29Q7Z478 1369 aaKnown RBP17.13■□□□□ 0.33
CALCOCO2-225ENST00000570513 ATP10AO60312 1499 aa17.12■□□□□ 0.33
CALCOCO2-225ENST00000570513 HRCP23327 699 aa17.11■□□□□ 0.33
CALCOCO2-225ENST00000570513 KDM5DQ9BY66 1539 aa17.11■□□□□ 0.33
CALCOCO2-225ENST00000570513 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
CALCOCO2-225ENST00000570513 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
CALCOCO2-225ENST00000570513 RNF17Q9BXT8 1623 aaKnown RBP17.1■□□□□ 0.33
CALCOCO2-225ENST00000570513 BCORL1Q5H9F3 1711 aa17.1■□□□□ 0.33
CALCOCO2-225ENST00000570513 DHX57Q6P158 1386 aaKnown RBP17.09■□□□□ 0.33
CALCOCO2-225ENST00000570513 PRDM15P57071 1507 aaPredicted RBP17.09■□□□□ 0.33
CALCOCO2-225ENST00000570513 SIGLEC1Q9BZZ2 1709 aa17.08■□□□□ 0.32
CALCOCO2-225ENST00000570513 PZPP20742 1482 aa17.07■□□□□ 0.32
CALCOCO2-225ENST00000570513 TRIM52Q96A61 297 aa17.06■□□□□ 0.32
CALCOCO2-225ENST00000570513 IQGAP3Q86VI3 1631 aa17.06■□□□□ 0.32
CALCOCO2-225ENST00000570513 AGLP35573 1532 aa17.06■□□□□ 0.32
CALCOCO2-225ENST00000570513 FAM135AQ9P2D6 1515 aa17.05■□□□□ 0.32
CALCOCO2-225ENST00000570513 NUP155O75694 1391 aa17.04■□□□□ 0.32
CALCOCO2-225ENST00000570513 KIF3BO15066 747 aa17.04■□□□□ 0.32
CALCOCO2-225ENST00000570513 VWDEQ8N2E2 1590 aa17.03■□□□□ 0.32
CALCOCO2-225ENST00000570513 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
CALCOCO2-225ENST00000570513 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.32
CALCOCO2-225ENST00000570513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.312e-7■■□□□ 12.9
CALCOCO2-225ENST00000570513 ABCC3O15438 1527 aa16.98■□□□□ 0.31
CALCOCO2-225ENST00000570513 KANK1Q14678 1352 aa16.98■□□□□ 0.31
CALCOCO2-225ENST00000570513 CEP152O94986 1710 aa16.98■□□□□ 0.31
CALCOCO2-225ENST00000570513 MPHOSPH9Q99550 1183 aa16.97■□□□□ 0.31
CALCOCO2-225ENST00000570513 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
CALCOCO2-225ENST00000570513 TET3O43151 1660 aa16.97■□□□□ 0.31
CALCOCO2-225ENST00000570513 LMTK2Q8IWU2 1503 aa16.96■□□□□ 0.31
CALCOCO2-225ENST00000570513 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
CALCOCO2-225ENST00000570513 ZC3H13Q5T200 1668 aaKnown RBP16.96■□□□□ 0.31
CALCOCO2-225ENST00000570513 EFCAB6Q5THR3 1501 aa16.96■□□□□ 0.3
CALCOCO2-225ENST00000570513 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.3
CALCOCO2-225ENST00000570513 GGT6Q6P531 493 aa16.95■□□□□ 0.3
CALCOCO2-225ENST00000570513 CAMSAP1Q5T5Y3 1602 aa16.93■□□□□ 0.3
CALCOCO2-225ENST00000570513 E9PCH4 1651 aa16.92■□□□□ 0.3
CALCOCO2-225ENST00000570513 ARID4BQ4LE39 1312 aaPredicted RBP16.92■□□□□ 0.3
CALCOCO2-225ENST00000570513 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
CALCOCO2-225ENST00000570513 PKD2Q13563 968 aa16.91■□□□□ 0.3
CALCOCO2-225ENST00000570513 MLECQ14165 292 aa16.9■□□□□ 0.3
CALCOCO2-225ENST00000570513 CLSPNQ9HAW4 1339 aa16.9■□□□□ 0.3
CALCOCO2-225ENST00000570513 CLTCQ00610 1675 aaKnown RBP16.89■□□□□ 0.29
CALCOCO2-225ENST00000570513 WASHC2CQ9Y4E1 1318 aa16.87■□□□□ 0.29
CALCOCO2-225ENST00000570513 ANKRD30BQ9BXX2 1392 aa16.87■□□□□ 0.29
CALCOCO2-225ENST00000570513 NPATQ14207 1427 aa16.87■□□□□ 0.29
CALCOCO2-225ENST00000570513 RPRD2Q5VT52 1461 aaKnown RBP16.86■□□□□ 0.29
CALCOCO2-225ENST00000570513 TRPM2O94759 1503 aa16.85■□□□□ 0.29
CALCOCO2-225ENST00000570513 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
CALCOCO2-225ENST00000570513 PLA2R1Q13018 1463 aa16.84■□□□□ 0.29
CALCOCO2-225ENST00000570513 FER1L4A9Z1Z3 1794 aa16.84■□□□□ 0.29
CALCOCO2-225ENST00000570513 ARHGAP31Q2M1Z3 1444 aa16.83■□□□□ 0.28
CALCOCO2-225ENST00000570513 CNTLNQ9NXG0 1405 aa16.82■□□□□ 0.28
CALCOCO2-225ENST00000570513 MROH2AA6NES4 1674 aa16.81■□□□□ 0.28
CALCOCO2-225ENST00000570513 MADDQ8WXG6 1647 aa16.81■□□□□ 0.28
CALCOCO2-225ENST00000570513 PTPRTO14522 1441 aa16.81■□□□□ 0.28
CALCOCO2-225ENST00000570513 SIN3AQ96ST3 1273 aa16.8■□□□□ 0.28
CALCOCO2-225ENST00000570513 ADAMTSL3P82987 1691 aa16.79■□□□□ 0.28
CALCOCO2-225ENST00000570513 PREX1Q8TCU6 1659 aa16.79■□□□□ 0.28
CALCOCO2-225ENST00000570513 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
CALCOCO2-225ENST00000570513 ERVK-7P63135 1459 aa16.79■□□□□ 0.28
CALCOCO2-225ENST00000570513 CCDC144AA2RUR9 1427 aa16.79■□□□□ 0.28
CALCOCO2-225ENST00000570513 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
CALCOCO2-225ENST00000570513 SYNMO15061 1565 aa16.78■□□□□ 0.28
CALCOCO2-225ENST00000570513 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
CALCOCO2-225ENST00000570513 NOS1P29475 1434 aa16.78■□□□□ 0.28
CALCOCO2-225ENST00000570513 RIMS1Q86UR5 1692 aaKnown RBP16.77■□□□□ 0.28
CALCOCO2-225ENST00000570513 NEUROD1Q13562 356 aa16.76■□□□□ 0.27
CALCOCO2-225ENST00000570513 SPATA31D1Q6ZQQ2 1576 aa16.76■□□□□ 0.27
CALCOCO2-225ENST00000570513 ZMYM3Q14202 1370 aa16.75■□□□□ 0.27
CALCOCO2-225ENST00000570513 C3P01024 1663 aa16.74■□□□□ 0.27
CALCOCO2-225ENST00000570513 PIK3C2BO00750 1634 aa16.74■□□□□ 0.27
CALCOCO2-225ENST00000570513 ZEB1P37275 1124 aaPredicted RBP16.72■□□□□ 0.27
CALCOCO2-225ENST00000570513 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
CALCOCO2-225ENST00000570513 FBXO31Q5XUX0 539 aaPredicted RBP16.7■□□□□ 0.26
CALCOCO2-225ENST00000570513 ADGRB3O60242 1522 aa16.7■□□□□ 0.26
CALCOCO2-225ENST00000570513 SPATA31E1Q6ZUB1 1445 aa16.68■□□□□ 0.26
CALCOCO2-225ENST00000570513 CFAP65Q6ZU64 1925 aaKnown RBP16.68■□□□□ 0.26
CALCOCO2-225ENST00000570513 TNRQ92752 1358 aa16.67■□□□□ 0.26
CALCOCO2-225ENST00000570513 NEURL4Q96JN8 1562 aa16.66■□□□□ 0.26
CALCOCO2-225ENST00000570513 CEBPAP49715 358 aaPredicted RBP16.65■□□□□ 0.26
CALCOCO2-225ENST00000570513 KIF1BO60333 1816 aa16.64■□□□□ 0.25
CALCOCO2-225ENST00000570513 PTPRMP28827 1452 aa16.64■□□□□ 0.25
CALCOCO2-225ENST00000570513 MYO3AQ8NEV4 1616 aa16.63■□□□□ 0.25
CALCOCO2-225ENST00000570513 L3MBTL2Q969R5 705 aa16.62■□□□□ 0.25
CALCOCO2-225ENST00000570513 TIMELESSQ9UNS1 1208 aa16.62■□□□□ 0.25
CALCOCO2-225ENST00000570513 TMEM131LA2VDJ0 1609 aa16.62■□□□□ 0.25
CALCOCO2-225ENST00000570513 PPP4R3CPQ6ZMV5 832 aa16.61■□□□□ 0.25
CALCOCO2-225ENST00000570513 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
CALCOCO2-225ENST00000570513 NLRP1Q9C000 1473 aa16.61■□□□□ 0.25
CALCOCO2-225ENST00000570513 IDI1Q13907 227 aa16.6■□□□□ 0.25
CALCOCO2-225ENST00000570513 CHGAP10645 457 aaKnown RBP16.59■□□□□ 0.25
CALCOCO2-225ENST00000570513 RGL3Q3MIN7 710 aa16.59■□□□□ 0.25
CALCOCO2-225ENST00000570513 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
CALCOCO2-225ENST00000570513 A2ML1A8K2U0 1454 aa16.57■□□□□ 0.24
CALCOCO2-225ENST00000570513 MYO5BQ9ULV0 1848 aa16.56■□□□□ 0.24
CALCOCO2-225ENST00000570513 UBR1Q8IWV7 1749 aa16.56■□□□□ 0.24
CALCOCO2-225ENST00000570513 KDM5AP29375 1690 aaKnown RBP16.56■□□□□ 0.24
CALCOCO2-225ENST00000570513 CEP170BQ9Y4F5 1589 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms