RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 PKD2Q13563 968 aa15.63■□□□□ 0.09
VPS9D1-206ENST00000567379 FOXD1Q16676 465 aa15.63■□□□□ 0.09
VPS9D1-206ENST00000567379 PPP1R15AO75807 674 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-206ENST00000567379 ILDR2Q71H61 639 aa15.62■□□□□ 0.09
VPS9D1-206ENST00000567379 POGZQ7Z3K3 1410 aa15.61■□□□□ 0.09
VPS9D1-206ENST00000567379 DISP3Q9P2K9 1392 aa15.61■□□□□ 0.09
VPS9D1-206ENST00000567379 FAM135AQ9P2D6 1515 aa15.6■□□□□ 0.09
VPS9D1-206ENST00000567379 KDM5CP41229 1560 aa15.59■□□□□ 0.09
VPS9D1-206ENST00000567379 IQGAP3Q86VI3 1631 aa15.59■□□□□ 0.09
VPS9D1-206ENST00000567379 RPRD2Q5VT52 1461 aaKnown RBP15.59■□□□□ 0.09
VPS9D1-206ENST00000567379 KIDINS220Q9ULH0 1771 aa15.58■□□□□ 0.08
VPS9D1-206ENST00000567379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.084e-9■■■■□ 22.8
VPS9D1-206ENST00000567379 MAGI2Q86UL8 1455 aa15.58■□□□□ 0.08
VPS9D1-206ENST00000567379 DHX29Q7Z478 1369 aaKnown RBP15.57■□□□□ 0.08
VPS9D1-206ENST00000567379 MLH3Q9UHC1 1453 aa15.57■□□□□ 0.08
VPS9D1-206ENST00000567379 EIF2AK4Q9P2K8 1649 aaKnown RBP15.57■□□□□ 0.08
VPS9D1-206ENST00000567379 KANK1Q14678 1352 aa15.53■□□□□ 0.08
VPS9D1-206ENST00000567379 DEPDC5O75140 1603 aa15.53■□□□□ 0.08
VPS9D1-206ENST00000567379 RICTORQ6R327 1708 aa15.52■□□□□ 0.08
VPS9D1-206ENST00000567379 A2MP01023 1474 aa15.52■□□□□ 0.07
VPS9D1-206ENST00000567379 KIF3BO15066 747 aa15.51■□□□□ 0.07
VPS9D1-206ENST00000567379 DIEXFQ68CQ4 756 aaKnown RBP15.51■□□□□ 0.07
VPS9D1-206ENST00000567379 L3MBTL2Q969R5 705 aa15.51■□□□□ 0.07
VPS9D1-206ENST00000567379 RAPGEF3O95398 923 aa15.5■□□□□ 0.07
VPS9D1-206ENST00000567379 ABCA6Q8N139 1617 aa15.48■□□□□ 0.07
VPS9D1-206ENST00000567379 SPATA31D1Q6ZQQ2 1576 aa15.48■□□□□ 0.07
VPS9D1-206ENST00000567379 PTPRMP28827 1452 aa15.47■□□□□ 0.07
VPS9D1-206ENST00000567379 VWDEQ8N2E2 1590 aa15.47■□□□□ 0.07
VPS9D1-206ENST00000567379 TET3O43151 1660 aa15.47■□□□□ 0.07
VPS9D1-206ENST00000567379 PRDM15P57071 1507 aaPredicted RBP15.47■□□□□ 0.07
VPS9D1-206ENST00000567379 RNF17Q9BXT8 1623 aaKnown RBP15.46■□□□□ 0.06
VPS9D1-206ENST00000567379 BCORL1Q5H9F3 1711 aa15.46■□□□□ 0.06
VPS9D1-206ENST00000567379 CCDC144AA2RUR9 1427 aa15.45■□□□□ 0.06
VPS9D1-206ENST00000567379 ZMYM4Q5VZL5 1548 aa15.45■□□□□ 0.06
VPS9D1-206ENST00000567379 ATP10AO60312 1499 aa15.45■□□□□ 0.06
VPS9D1-206ENST00000567379 FRMPD1Q5SYB0 1578 aa15.45■□□□□ 0.06
VPS9D1-206ENST00000567379 DIP2CQ9Y2E4 1556 aa15.45■□□□□ 0.06
VPS9D1-206ENST00000567379 MROH1Q8NDA8 1641 aa15.44■□□□□ 0.06
VPS9D1-206ENST00000567379 E9PCH4 1651 aa15.44■□□□□ 0.06
VPS9D1-206ENST00000567379 CERKQ8TCT0 537 aa15.43■□□□□ 0.06
VPS9D1-206ENST00000567379 ADAMTSL3P82987 1691 aa15.42■□□□□ 0.06
VPS9D1-206ENST00000567379 PLA2R1Q13018 1463 aa15.42■□□□□ 0.06
VPS9D1-206ENST00000567379 LMTK2Q8IWU2 1503 aa15.4■□□□□ 0.06
VPS9D1-206ENST00000567379 SPHKAPQ2M3C7 1700 aa15.4■□□□□ 0.06
VPS9D1-206ENST00000567379 YEATS2Q9ULM3 1422 aa15.39■□□□□ 0.05
VPS9D1-206ENST00000567379 TRPM2O94759 1503 aa15.38■□□□□ 0.05
VPS9D1-206ENST00000567379 CEP152O94986 1710 aa15.38■□□□□ 0.05
VPS9D1-206ENST00000567379 PTPRTO14522 1441 aa15.38■□□□□ 0.05
VPS9D1-206ENST00000567379 NBPF8Q3BBV2 869 aa15.38■□□□□ 0.05
VPS9D1-206ENST00000567379 EFCAB6Q5THR3 1501 aa15.38■□□□□ 0.05
VPS9D1-206ENST00000567379 GGT6Q6P531 493 aa15.37■□□□□ 0.05
VPS9D1-206ENST00000567379 UHRF1BP1Q6BDS2 1440 aa15.36■□□□□ 0.05
VPS9D1-206ENST00000567379 EIF4G2P78344 907 aaKnown RBP eCLIP15.35■□□□□ 0.05
VPS9D1-206ENST00000567379 REREQ9P2R6 1566 aa15.34■□□□□ 0.05
VPS9D1-206ENST00000567379 DCAF11Q8TEB1 546 aa15.34■□□□□ 0.05
VPS9D1-206ENST00000567379 WASHC2CQ9Y4E1 1318 aa15.34■□□□□ 0.05
VPS9D1-206ENST00000567379 ABCC3O15438 1527 aa15.33■□□□□ 0.05
VPS9D1-206ENST00000567379 ZNF326Q5BKZ1 582 aaKnown RBP15.33■□□□□ 0.04
VPS9D1-206ENST00000567379 KDM2AQ9Y2K7 1162 aa15.33■□□□□ 0.04
VPS9D1-206ENST00000567379 ZC3H13Q5T200 1668 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-206ENST00000567379 HSPA5P11021 654 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-206ENST00000567379 RGL3Q3MIN7 710 aa15.32■□□□□ 0.04
VPS9D1-206ENST00000567379 CLTCL1P53675 1640 aa15.32■□□□□ 0.04
VPS9D1-206ENST00000567379 MADDQ8WXG6 1647 aa15.32■□□□□ 0.04
VPS9D1-206ENST00000567379 AGLP35573 1532 aa15.31■□□□□ 0.04
VPS9D1-206ENST00000567379 CAMSAP1Q5T5Y3 1602 aa15.3■□□□□ 0.04
VPS9D1-206ENST00000567379 RALGAPBQ86X10 1494 aa15.3■□□□□ 0.04
VPS9D1-206ENST00000567379 HIRIP3Q9BW71 556 aaPredicted RBP15.3■□□□□ 0.04
VPS9D1-206ENST00000567379 ARHGEF40Q8TER5 1519 aa15.29■□□□□ 0.04
VPS9D1-206ENST00000567379 SPATA31E1Q6ZUB1 1445 aa15.29■□□□□ 0.04
VPS9D1-206ENST00000567379 NEURL4Q96JN8 1562 aa15.28■□□□□ 0.04
VPS9D1-206ENST00000567379 STAC3Q96MF2 364 aa15.28■□□□□ 0.04
VPS9D1-206ENST00000567379 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
VPS9D1-206ENST00000567379 KIF1BO60333 1816 aa15.28■□□□□ 0.04
VPS9D1-206ENST00000567379 NPATQ14207 1427 aa15.27■□□□□ 0.04
VPS9D1-206ENST00000567379 ARHGAP31Q2M1Z3 1444 aa15.26■□□□□ 0.03
VPS9D1-206ENST00000567379 PRAG1Q86YV5 1406 aa15.26■□□□□ 0.03
VPS9D1-206ENST00000567379 CNTLNQ9NXG0 1405 aa15.26■□□□□ 0.03
VPS9D1-206ENST00000567379 HSPA2P54652 639 aa15.25■□□□□ 0.03
VPS9D1-206ENST00000567379 CFAP65Q6ZU64 1925 aaKnown RBP15.25■□□□□ 0.03
VPS9D1-206ENST00000567379 RIMS1Q86UR5 1692 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-206ENST00000567379 TRPM1Q7Z4N2 1603 aa15.24■□□□□ 0.03
VPS9D1-206ENST00000567379 DDX10Q13206 875 aaKnown RBP15.23■□□□□ 0.03
VPS9D1-206ENST00000567379 CARD11Q9BXL7 1154 aa15.23■□□□□ 0.03
VPS9D1-206ENST00000567379 ROCK2O75116 1388 aaKnown RBP15.23■□□□□ 0.03
VPS9D1-206ENST00000567379 USP47Q96K76 1375 aa15.23■□□□□ 0.03
VPS9D1-206ENST00000567379 MIER1Q8N108 512 aa15.22■□□□□ 0.03
VPS9D1-206ENST00000567379 NOS1P29475 1434 aa15.22■□□□□ 0.03
VPS9D1-206ENST00000567379 UGGT1Q9NYU2 1555 aa15.22■□□□□ 0.03
VPS9D1-206ENST00000567379 SIGLEC1Q9BZZ2 1709 aa15.2■□□□□ 0.02
VPS9D1-206ENST00000567379 LAMC1P11047 1609 aa15.19■□□□□ 0.02
VPS9D1-206ENST00000567379 ARID4BQ4LE39 1312 aaPredicted RBP15.18■□□□□ 0.02
VPS9D1-206ENST00000567379 ADGRB3O60242 1522 aa15.18■□□□□ 0.02
VPS9D1-206ENST00000567379 POLR1AO95602 1720 aaPredicted RBP15.18■□□□□ 0.02
VPS9D1-206ENST00000567379 CHGAP10645 457 aaKnown RBP15.18■□□□□ 0.02
VPS9D1-206ENST00000567379 GPRASP1Q5JY77 1395 aa15.18■□□□□ 0.02
VPS9D1-206ENST00000567379 PREX1Q8TCU6 1659 aa15.18■□□□□ 0.02
VPS9D1-206ENST00000567379 PIK3C2BO00750 1634 aa15.17■□□□□ 0.02
VPS9D1-206ENST00000567379 MROH2AA6NES4 1674 aa15.17■□□□□ 0.02
VPS9D1-206ENST00000567379 CLTCQ00610 1675 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms